#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on April 19, 2024; 20:11 GMT TreeBASE (cc) 1994-2008 Study reference: Sosa V. 2006. Molecular and morphological phylogenetic study of subtribe Bletiinae (Epidendreae, Orchidaceae). Systematic Botany, null. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S1694] BEGIN TAXA; TITLE Taxa1; DIMENSIONS NTAX=44; TAXLABELS Basiphyllaea_carabiaiana Basiphyllaea_corallicola Basiphyllaea_hamiltoniana Basiphyllaea_hoffmannii Basiphyllaea_sarcophylla Basiphyllaea_volubilis Basiphyllaea_wrigthii Bletia_adenocarpa Bletia_amabilis Bletia_antillana Bletia_campanulata_s.l. Bletia_catenulata_s.l. Bletia_coccinea Bletia_edwardsii Bletia_ensifolia Bletia_florida Bletia_gracilis Bletia_greenwoodiana Bletia_jucunda Bletia_lilacina Bletia_macristhmochila Bletia_neglecta Bletia_nelsonii Bletia_parkinsonii Bletia_patula Bletia_punctata Bletia_purpurata Bletia_purpurea Bletia_reflexa Bletia_riparia Bletia_roezlii Bletia_tenuifolia Bletia_urbana Chysis_bractescens Helleriella_guerrerensis Hexalectris_brevicaulis Hexalectris_grandiflora Hexalectris_nitida Hexalectris_parviflora Hexalectris_revoluta Hexalectris_spicata Hexalectris_warnockii Isochilus_linearis Ponera_striata ; END; BEGIN TAXA; TITLE Taxa2; DIMENSIONS NTAX=23; TAXLABELS Basiphyllaea_carabiaiana Basiphyllaea_hamiltonii Bletia_adenocarpa Bletia_campanulata Bletia_catenulata Bletia_coccinea Bletia_gracillis Bletia_jucunda Bletia_lilacina Bletia_machristmochila Bletia_neglecta Bletia_parkinsonii Bletia_punctata Bletia_purpurata Bletia_purpurea Bletia_reflexa Bletia_urbana Chysis_bractescens Helleriella_guerrerensis Hexalectris_grandiflora Hexalectris_revoluta Isochilus_linearis Ponera_striata ; END; BEGIN TAXA; TITLE Taxa3; DIMENSIONS NTAX=22; TAXLABELS Basiphyllaea_carabiaiana Basiphyllaea_hamiltoniana Bletia_adenocarpa Bletia_campanulata_s.l. Bletia_catenulata_s.l. Bletia_coccinea Bletia_gracilis Bletia_jucunda Bletia_lilacina Bletia_macristhmochila Bletia_neglecta Bletia_parkinsonii Bletia_punctata Bletia_purpurata Bletia_purpurea Bletia_reflexa Bletia_urbana Chysis_bractescens Helleriella_guerrerensis Hexalectris_revoluta Isochilus_linearis Ponera_striata ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M903] TITLE Morphology; LINK TAXA = Taxa1; DIMENSIONS NCHAR=45; FORMAT DATATYPE=Standard SYMBOLS= "0 1 2 3 4 5 6 7" MISSING=? GAP= -; CHARSTATELABELS 1 Plants / Achlorophyllous Chlorophyllous, 2 Stem / 'segmented-articulated rhizome' vertical_corm horizontal_corm tuberoid_rhizomes aerial_and_compressed, 3 Stem / with_aerial_shoots without_aerial_shoots, 4 Stem / simple branched, 5 Sheathing_bract_texture / chartaceous coriaceous scarious, 6 Sheathing_bracts / Present_in_subterranean_stems Absent_from_subterranean_stems, 7 Leaves_at_flowering_period / present_and_absent always_absent, 8 Leaf_texture / chartaceous coriaceous fleshy, 9 Leaf_longitudinal_posture / conduplicate plicate, 10 Leaf_form / linear elliptic rounded, 11 Leaf_grouping / solitary in_groups, 12 Leaf_abaxial_color / green purple brownish, 13 Leaf_base / very_narrow wide sheathing, 14 Inflorescence_position / terminal lateral, 15 Inflorescence / erect climbing, 16 Number_of_flowers_per_inflorescence / less_than_five six_to_10 '11 - 20' more_than_21, 17 Flower_size / small medium large, 18 Flower_shape / salverform campanulate ampliate, 19 Flower_position / erect ascending nodding, 20 Flower_mentum / present absent, 21 Sepal_position / spreading appressed reflexed revolute, 22 Sepal_color / yellow_to_orange pale_pink_to_purple cream_to_greenish cream_to_purplish ivory_white, 23 Dorsal_sepal_form / oblong elliptic lanceolate 'narrowly-elliptic', 24 Petal_form / oblong obovate elliptic lanceolate ovate, 25 Petal_position / spreading appressed revolute, 26 Petal_color / yellowish pinkish orange cream_with_purple purplish cream green white, 27 Lip_division / trilobed entire, 28 Lip_lateral_lobes / auriculate 'non-auriculate', 29 Lip_lateral_lobes_position / upturned horizontal, 30 Lip_midlobe_position / curved_downward horizontal curved_upward, 31 Lip_callus / smooth crested hairy nerved, 32 Callus_color / same_color_as_lip different_color_as_lip, 33 Callus_crests_number / Less_than_five Five More_than_five, 34 Lip_midlobe_isthmus / present absent, 35 Lip_papillae / present absent, 36 Pedicellate_ovary_surface / smooth verrucose, 37 Rostellum / short elongated, 38 Column / winged not_winged, 39 Column_foot / present absent, 40 Column_position / horizontal bending upward, 41 Column / lyrate non_lyrate, 42 Wings_position / basal apical, 43 Pollinia_number / four eight, 44 Pollinia_texture / mealy waxy, 45 Capsule_position / erect pendent horizontal, ; MATRIX [ 10 20 30 40 50 ] [ . . . . . ] Basiphyllaea_carabiaiana 1300?100000020120110021205010111010001110011? Basiphyllaea_corallicola 13?02102000000000110123215010111101000100011? Basiphyllaea_hamiltoniana 1300?1010100100{01}0221023306010211111000110011? Basiphyllaea_hoffmannii 1300?101000000000201123306010211111001110?11? Basiphyllaea_sarcophylla 13000103020210000011022206010211011001110?110 Basiphyllaea_volubilis 130020010001000{12}00210202151???110?10001100112 Basiphyllaea_wrigthii 130011000100201001112212030100111110001100111 Bletia_adenocarpa 1?10001011101002021100000001011111110{01}1010110 Bletia_amabilis 1?10001011101002210{01}?111?10102111110000110110 Bletia_antillana 1210001011101{01}0112000111110100111110001110110 Bletia_campanulata_s.l. 12100010111010011101?112?1010011211001111?110 Bletia_catenulata_s.l. 1110100111101{01}0222010112110100111010010{01}1?111 Bletia_coccinea 1?1010101110100112010012020101111110001010110 Bletia_edwardsii 12100000111011021110111211012011110001111011? Bletia_ensifolia 111000101010100112110313130100111110001010110 Bletia_florida 1?10000111101{01}031200012114010011?11001111?110 Bletia_gracilis 111010111111100112011223150101112110001010110 Bletia_greenwoodiana 11100010101010011211033214010011111001111?11? Bletia_jucunda 1110000011101000121001211301001111100{01}0110110 Bletia_lilacina 111000001{01}10100102100111110100111110000110110 Bletia_macristhmochila 1?101010111010012200010104010211101001111?110 Bletia_neglecta 111000001110100112100111130100111110000110110 Bletia_nelsonii 111000101110100212100123040110013110000010110 Bletia_parkinsonii 111000001110100312000133010110111110000011110 Bletia_patula 1?101000111010011201011204010111011000111111? Bletia_punctata 111010111111100312110210030001112110001010110 Bletia_purpurata 11100010111010001021?113?41???1011101?011?101 Bletia_purpurea 1110{01}00111101{01}0312100104110100111{01}10001110110 Bletia_reflexa 111000001110100122102111140100111110001110110 Bletia_riparia 111001001110110302100124110102111010001110110 Bletia_roezlii ?1101?111111100112010202050100101100001010110 Bletia_tenuifolia ??100?1010101001021001121101001111100?101?110 Bletia_urbana ??100?101110100112100001120100111110001110110 Chysis_bractescens 10112?010110110122110400070000112110000110111 Helleriella_guerrerensis 1411??11011020000210002300010040?110000110012 Hexalectris_brevicaulis 0010001??????00110110113040100111110001110111 Hexalectris_grandiflora 0010001??????001122101100400001?1110001110111 Hexalectris_nitida 0010001??????002121121010401001?1110001110111 Hexalectris_parviflora 0010001??????0011201011304010011111000101011? Hexalectris_revoluta 0010001??????00211113102240001101110001110112 Hexalectris_spicata 0010001??????00212100100030110102110001110111 Hexalectris_warnockii 0010001??????0011211011204010011110000101011? Isochilus_linearis 1410??010010000212210123011???013?100112??011 Ponera_striata 14100?010110100002111202031???413?1001021?011 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M900] TITLE ITS; LINK TAXA = Taxa2; DIMENSIONS NCHAR=721; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Basiphyllaea_carabiaiana TCGAGACCGAAATAAA-TATCGAGCGATTCGGAGAACCCGTGCATCGGCGA---CGGCGGCTGCCGTCGC-GTAACATCCGTCCCGGTCGCAGGCCTCATCCCC--------GTGTGGGGGG----------CACGATGAAGGACGGATGAAACACTCAAA-CCGGCG-CAGTCACGCGCCAAGGGAAGATATCGAAAGAACACGAGCCCCGCATCGGG-CTCGGTGGCGCGGCGTGC-GTCGCACGCCGCAGGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATA-GTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAAATTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCGAGGGCACGTCCGCCTGGGCGTCAAGCATTGGTTCGCTCCGTGCCAGC--TCCATCC-----CACCC------GATGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCTCGTCGTGCCCGCCGGCGCGGCGGGCTGAA-AGTGGGCG--ATCGTCTCATTGC---CCGCGAACAACGAGGGGTGGACG---------GAACGAGGCCTACGTTGGG--TCGTGCCGGCC---CGAGAGAAGATTACG--CCCCCGAGGTGA----TCCCAACCC--ATGCGCCGA-----TCC--ACC----GGCGGCGGCTTGGAAT Basiphyllaea_hamiltonii TCGAGACCGAAATAAAATATCGAGCGATTCGGAGAACCCGTGCATCGGCGA---CGGCGGCCGCCGTCGC-GTATCATCCGTCCAGGTCGT-GGCCTGATCCCC----GCCGGGGGGGCGG----------CCGCGATGGAGGGCGGATGAGACACTCAAA-CCGGCG-CAGCCACGCGCCAAGGGAAAATATCGAGGAGACACGAGCCCCGCGCAGGG-CTCGGTGGCATGGCGTGCCGTCGCACGCCATGGGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCGAGGGCACGTCCGCCTGGGCGTCAAGCGTCGCGTCGCTCCGCGCCAGCCCTCCATCC-----CACCC------AGTGGGTGTGCCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCCGGCGCGTCGGGCTGAAGAGCGGGCG--ATCGTCTCATCGCGC-CCACGAGCAACAAGGGGTGGATG---------GAAAGAGGCCTACGTTGCG--TCGTGCTGGCC---CGAGAAAAGATCACG--CCCCCGAGGCGA----TCCCGACCC--ATGCGCCGA-----TCC--ATCCACAGACGGCGGCTTGGAAT Bletia_adenocarpa TCGAGACCGAAATAA--TATCGAGCGATTCGGAGAACCCGTGCATCAGCGA---CGGCGGCTGCCGTCGC-GTAGCATCCGTTCCAGTCGT-GGCCTCGTCCCC----ACCGGGATGG-------------CCACGATGAAGGACGGATGAAACACTCAAA-CCGGCG-CAGCCACGCGCCAAGGGAAAATATCGAAAAAACACGAGCCCCACGCCGGG-CTCAGTGGCGTGGCGTGCCGTTGCACGCCACAGGGAT----CGAAACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAAAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAAC--TCCATCC-----CACCC------AACGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCCGGCACGGCGGGCTGAAGAGTGGGTG--ATCTTCTCATTGC---CCGCGAACAACAAGGGGTGGATG---------GAACGCGGCCTACGTTGTG--TCGTGCTGGCC---TGAGAGAGGATCGCA--CCTCCGAGGTGA----TCCCAACCC--ATGCGCCGA-----TCC--ACT----GATGGCGGCTTGGAAT Bletia_campanulata TCGAGACCGAAATAA--TATCGAGCGATTCGGAGAACCCGTGCATCAGCGA---CGGCGGCAGCCGTCGC-GTAGCATCCGCCCCAGTCGT-GGCCTCGTCCCG----ACCGGGATGG-------------CCACGATGAAGGACGGATGAAACACTCAAA-CCGGCG-CAGCCACGCGCCAAGGGAAAATATCGAAAAAACACGAGCCCCACGCCGGG-CTCAGTGGCGTGGCGTGCCGTTGCACGCCACAGGGAT----CGAAACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAAGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAAC--TCCATCC-----CACCC------AACGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCCGGCACGGCGGGCTGAAAAATGGGTG--ATCTTCTCATTGC---CCGCGAACAACAAGGGGTGGATG---------GAACGCGGCCTACGTTGTG--TCGTGCTGGCC---TGAGAGAGGATCGCA--CCTCCGAGGTGA----TCCCAACCC--ATGCGCCGA-----TCC--ACC----GACGGTGGCTTGGAAT Bletia_catenulata TCGAGACCGAAATAA--CATCGAGCGATTCGGAGAACCCGTGCATCACCGA---TGGCGGCTGCCGTCGC-GTAACATCCTTCCCGGCTGT-GGCCTCATCCCCC---ACCGGGCGGGGGGGG--------CCACGATGCAGGACGGATGAAACACTCAAAACCGGCG-CAGTCACGCGCCAAGGGAAAATATTGAAAAAACACGAGCCC-GCTCCGGG-CTCAGTTGCGTGGCGTGCCCTCGCACGCCACGGGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAAC--TCCATCCGCTCCCACCCCG----AATGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCCGGCGCGGCGGGCTGAAGAGCGGGTG--ATCGTCTCGCTGCC---CGCGAGCAACAAGGGGTGGATG---------GAACGAGGCCTCCGTTGTG--TCGTGCTGGCC---CGAGAGAAGATTACACACCCCCGAGGTGA----TCCCAACCC--ATGCGCCGA-----TCC--ACC----GACGGCGGCTAGGAAT Bletia_coccinea ????????????????-CATCGAG-AATTCGGAGT-TCCGTGCATCAGCGA---CGGCGGCTGCCGTCGC-GTAGCATCCGTTCCAGTCGT-GGCCTCGTCCCCA----CCGGGATGG-------------CCACGATGAAGGACGGATGAAACACTCAAA-CCGGCG-CAGCCACGCGCCAAGGGAAAATATCGAAAAAACACGAGCCCCACGCCGGG-CTCAGTGGCGTGGCGTGCCGTTGCACGCCACAGGGAT----CGAAACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACTTGGTGCGAATTGCA-AATCCCGCGAACCATCGA-AATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAAC--TCCATCC-----CACCC------AACGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCCGGCACGGCGGGCTGAAGAGTGGGTG--ATCTTCTCATTGC---CCGCGAACAACAAGGGGTGGATG---------GAACGCGGCCTACGTTGTG--TCGTGCTGGCC---TGAGAGAGGATCGCA--CCTCCGAGGTGA----TCCCAACCC--ATGCGCCGA-----TCC--ACT----GATGGCGGCTTGGAAT Bletia_gracillis TCGAGAC-GAAATAA--T-----GCGATTCGGAGAACCCGTGCATCAGCGA---TGGCGGCTGCCATCGC-GTAGCATCCGTCCCAGTCGT-GGCCTCGTCCCC----ACCGGGATGG-------------CCACGATGAAGGACGGATGAAACACTCAAA-CCGGCG-CAGCCACGCGCCAAGGGAAAATATCGAAAAAACACGAGCCCCACGCCGGG-CTCAGTGGCGTGGCGTGCCGTTGCACGCCACAGGGAT----TGAAACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAAAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAAAATCCCGCGAACCATCGAAAATTTGAACGCAAGTTGCGCCCGAGGCCAGCAGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAAC--TCCATCC-----CACCC------AACGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCTCACCGGCACGGCGGGCTGAAGTGTGGGTG--ATCTTCTCATTTC---CCGCGAACAACAAGGGGTGGATG---------GAACGCGGCCTACGTTGTG--TCGTGCTGGCC---TGAGAGAGGATCGCA--CCTTCGAGGTGA----TCCCAACCC--ATGCGCCGA-----TCC--ACT----GATGGCGGCTTGGAAT Bletia_jucunda TCGAGACCGAAATAA--TATCGAGCGATTCGGAGAACCCGTGCATCAGCGA---TGGCGGCTGCCGTCGC-GTAGCATCCGTCCCAGTCGT-GGCCTCGTCCCC----------ATCGGGGGG--------CCACGATGAAGGACGGATGAAACACTCAAA-CCGGCG-CAGCCACGCGCCAAGGGAAAATATCGAAAAAACACGAGCCCCACGCCGGG-CTCAGTGGCGTGGCGTGCCGTTGCACGCCACAGGGAT----CGAAACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAAAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAATTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAAC--TCCAT-C----CCACCC------AACGGGTGTGTCGGGCGAGGCTCGGATGTGCAGAGTGGCCCGTCGTGCCCGCCGGCACGGCGGGCTGAAGAGTGGGTG--ATCTTCTCATTGCC---CGCGAACAACGAGGGGTGGATG---------GAACGCGGCCTACGTTGTG--TCGTGCTGGCC---TGAGAGAAGATCGCA--CCTCCGAGGTGA----TCCCAACCC--ATGCGCCGA-----TCC--ACC----GACGGCGGCTTGGAAT Bletia_lilacina TCGAGACCGAAATGA--TATTGAGCGATTCGGAGAACCCGTGCATCAGCGG---CGGCGGCTGCCGTCGC-GTAGCGTCCGCCCCAGTCGT-GGCCTCGTCCCCA----GAATGAGGGG-------------CACGATGAAGGACGGATGAAACACTCAAA-CCGGCGTCAGTCACGCGCCAAGGGAAAATATCGAGAAAACACGGGGCCCGCACCGGG-CTCGGTGGCGTGGCGTGCCGTTGCACGCCGTAAGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCACAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAGC--TCCATCC-----CACCC------AACGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCCGGCGCGGCGGGCTGAAAAGTGGGTG--ATCGTCTCATTGC---CCGCAAACAACAAGGGGTGGATG---------GAACGCGGCCTACGTTGTG--TCGTGCTGGCC---CGAGAAAAGATCACA--CCCCCGAGGTGA----TCCCGACCC--ACGCGCCGA-----TCC--ACC----GACGGCGGCTTGGAAT Bletia_machristmochila TCGAGACCGAAATA---TATCGAGCGATTCGGAGAACCCGTGCATCAGCGA---CGGCGGCAGCCGTCGC-GTAGCATCCGCCCCAGTCGT-GGCCTCGTCCCGA----CCGGGATGG-------------CCACGATGAAGGACGGATGAAACACTCAAA-CCGGCG-CAGCCACGCGCCAAGGGAAAATATCGAAAAAACACGAGCCCCACGTCGGG-CTCAGTGGCGTGGCGTGCCGTTGC-CGCCTCATGGAT----CGAAACCACTCTCGGCAATGGATATCTCGGCTCTCGCATC-ATGAAGATCGCAGCGAAATGCGATACGTGGTGCCAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAAC--TCCATCC-----CACCC------AACGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCCGGCACGGCGGGCTGAAGAGTGGGTG--ATCTTCTCATTGC---CCGCGAACAACAAGGGGTGGATG---------GAACGCGGCCTACGTTGTG--TCGTGCTGGCC---TGAGAGAGGATCGCA--CCTCCGAGGTGA----TCCCAACCC--ATGCGCCGA-----TCC--ACC----GACGGCGGCTTGGAAT Bletia_neglecta TCGAGACCGAAATGA--TATCGAGCGATTCGGAGAACCCGTGCATCAGCGG---CGGCGGCTGCCGTCGC-GTAGCGTCCGCCCCAGTCGT-GGCCTCGTCCCCA----GAATGAGGGG-------------CACGACGAAGGACGGATGAAACACTCAAA-CCGGCG-CAGTCACGCGCCAAGGGAAAATATCGAGAAAACACGGGGCCCACACCGGG-CTCGGTGGCGTGGCGTGCCGTTGCACGCCGTAAGGAC----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAAAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAGC--TCCATCC-----CACCC------GACGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCCGGCGCGGCGGGCTGAAGAGTGGGTG--ATCGTCTCATTGC---CCGCGAACAACAAGGGGTGGATG---------GAACGCGGCCTACGTTGTG--TCGTGCTGGCCCTAAAAAAGAATATTACC--CCCCCGAGGTGA----TCC-GACCC--ACGCGCCGA-----TCC--AAC----GACGGCGGCTTGGAAT Bletia_parkinsonii TCGAGAC-GAAATAA--TATCGAGCGATTCGGAGAACCCGTGCATCAGCG----CGGCGGCTGCCGTCGC-GTAGCATCCGTCCCGGTCGT-GGCCTCGTCCCCT----CCGGG-TGGGGG-----------CACGATGAGGGACGGATGAAACACTCAAA-CCGGCG-CCGTCACGCGCCAAGGGAAAATATCGAGAAAACACGAGCCCCGCACCGGG-CTCGGTGGCGTGG-----CGTTGCACGTCACGAGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAGC--TCCATCC-----CGCCC------AACGGGCGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCGGGCGCGGCGGGCTGAAGAGTGGGTG--ATCGTCTCACTGCC---CGCGAACAACGAGGGGTGGATG---------GAACGCGGCCTGCGTTGTG--TCGTGCTGGCC---CGAGAGAAGATCACA--CCTCCGAGGTGA----TCCCGACCC--ACGCGCCGA-----TCC--ACC----GACGGCGGCTTGGAAT Bletia_punctata TTGAGACCGAAATAA--TATCGAGCGATTCGGAGAACCCGTGCATCAGCGA---CGGCGGCTGCCGTCGC-GTAGCATCCGTCCCGGTCGT-GGCCTCGTCCCCT----CCGGGATGGGGG-----------CACGATGAGGGACGGATGAAACACTCAAA-CCGGCG-CCGTCACGCGCCAAGGGAAAATATCGAGAAAACACGAGCCCCGCACCGGGTCTCGGTGGCGTGG-----CGTTGCACGTCACGAGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAGC--TCCATCC-----CGCCC------AACGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCGGGCGCGGCGGGCTGAAGAGTGGGTG--ATCGTCTCACTGC---CCGCGAACAACGAGGGGTGGATG---------GAACGCGGCCTGCGTTGTG--TCGTGCTGGCC---CGAGAGAAGATCACA--CCTCCGAGGTGA----TCCCGACCC--ACGCGCCGA-----TCC--ACC----GACGGCGGCTTGGAAT Bletia_purpurata TCGAGACCGAAATAA--TATCGAGCGATTCGGAGAACCCGTGCATCAGCGA---CGGCGGCTGCCGTCGC-GTAGCATCCGTCCCGGTCGT-GGCCTCGTCCCCT----CCGGGATGGGGG-----------CACGATGAGGGACGGATGAAACACTCAAA-CCGGCG-CCGTCACGCGCCAAGGGAAAATATCGAGAAAACACGAGCCCCACACCGGG-CTCGGTGGCGTGG-----CGTTGCACGCCACGAGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAGC--TCCATCC-----CGCCC------AACGGGCGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCGGGCGCGGCGGGCTGAAGAGTGGGTG--ATCGTCTCACTGC---CCGCGAACAACGAGGGGTGGATG---------GAACGCGGCCTGCGTTGTG--TCGTGCTGGCC---CGAGAGAAGATCACA--CCTCCGAGGTGA----TCCCGACCC--ACGCGCCGA-----TCC--ACC----GACGGCGGCTTGGAAT Bletia_purpurea TCGAGACCGAAATGA--TATCGAGCGATTCGGAGAACCCGTGCATCAGCGA---CGGCGGCTGCCGTCGC-GTAGCGTCC--CCCCGTCGT-GGCCTCGTCCCC-------AGAATGAGGGG----------CACGACGAAGGACGGACGAAACACTCAAA-CCGGCG-CAGTCACGCGCCAAGGGAACATATCGAGAGAACACGGGGCCCACACCGGG-CTCGGTGGCGTGGCGTGCCGTTGCACGCCGTAAGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAGC--TCCAT-C----CCACCC------AACGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCCGGCGCGGCGGGCTGAAGAGTGGGTG--ATCGTCTCATTGCC---CGCGAACAACGAGGGGTGGATG---------GAACGCGGCCTACGTTGTG--TCGTGCTGGCC---CGAGAAGACATTACA--CCCCCGAGGTGA----TCCCGACCC--ACGCGCCGA-----TCC--ACC----GACGGCGGCTTGGAAT Bletia_reflexa TCGAGAC-GAAATGA--TATCGAGCGATTCGGAGATCCCGTGCATCAGCGG---CGGCGGCTGCCGTCGC-GTAGCGTCCGCCCCAGTCGT-GGCCTCGTCCCC-------AGAATGAGGG----------GCACGATGAAGGACGGATGAAACACTCAAA-CCGGCG-CAGTCACGCGCCAAGGGAAAATATCGAGAAAACACGGGGCCC-CACCGGG-CTCGGTGGCGTGGCGTGCCGTTGCACGCCGTAAGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAAAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAAAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAGC--TCCATCC-----CACCC------AACGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCTCGTCGTGCTCACCGGCACGGCGGGCTGAAGTGTGGGTG--ATCTTCTCATTTC---CCGCGAACAACAAGGGGTGGATG---------GAACGCGGCCTACGTTGTG--TCGTGCTGGCC---TGAGAGAGGATCGCA--CCTTCGAGGTGA----TCCCAACCC--ATGCGCCGA-----TCC--ACT----GATGGCGGCTTGGAAT Bletia_urbana TCGAGACCGAAATAA--TATCGAGCGATTCGGAGAACCCGTGCATCAGCGA---CGGCGGCAGCCGTCGC-GTAGCATCCGCCCCAGTCGT-GGCCTCGTCCCGA----CCGGGATGG-------------CCACGATGAAGGACGGATGAAACACTCAAA-CCGGCG-CAGCCACGCGCCAAGGGAAAATATCGAAAAAACACGAGCCCCACGCCGGG-CTCAGTGGCGTGGCGTGCCGTTGCACGCCACAGGGAT----CGAAACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAAC--TCCATCC-----CACCC------AACGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCCGGCACGGCGGGCTGAAGAGTGGGTG--ATCTTCTCATTGC---CCGCGAACAACAAGGGGTGGATG---------GAACGCGGCCTACGTTGTG--TCGTGCTGGCC---TGAGAGAGGATCGCA--CCTCCGAGGTGA----TCCCAACCC--ATGCGCCGA-----TCC--ACC----GACGGCGGCTTGGAAT Chysis_bractescens TCGAGACCCAAATA---TATCGAGCGATTCGGAGAACCCGTGAATGAGCGG---CGGCAGCTGCCGTCGC-GAAATTGCCGTCCCAGCCGT-GGCCTCGTC-------AGAGAGGTGGGGGGG--------CCACGAGGAAGGACGGATGAAACTC--AAA-CCGGCG-CAGCTACGCGCCAAGGGA--ATATCGAAAAA-CACGAGCCCTGTATCGGG-TTTAGTGGCGTGGAGTGCG-TCGCACACCACACGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAAC--TCCATCC-----CATCC------GATGGGTGTGTCGGTCGAGGCTCGGACGTGCAGAGTGGCTCGTCGTGCCCGTCGGTGCGGCGGGCTGAAGAGGGGGTC--GTCGTCTCATCGGC---CACGAACAACAAGGGGTGGATGAGAGCTGT-GAGCAAGGCCTACGTTGTC--TCGTGCCGGCC---TGAGAAAAGATTATA--CTCCCGT-TTGA----TCCCAACCC--ATGCGCC--CGG--TCC--ACG----GACGGCGGCTTGGAAT Helleriella_guerrerensis TCGAGACCGAAATAA--TATCGAGCGATTCGGAGAACCCGTGAATGAGCGA---CGGCGGCAGTCGTCGC-GGAACAGCCGTCCCAGTCGT-GGCCTCATCTCCC-ATCGGGGGGTGGGGGG-------AACCACGATGAAGGGCGGATGAAA-ACTCAAA-CCGGCG-CAGTCACGCGCCAAGGGAATAT---GGAAAAACATGAGCCCTGCATCGGG-TTTCGTGGCGTGGGGTGCTGTTGCACGCCATATGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAGC--TCCATGC----CCACCT------AACGGGCGTGTCGGTCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGTCGGTGCGGCGGGCTGAAGAGTGGGTGTCATCATCTCATCATCGGCCGCGAACAACTAGGGGTGGATGCGCCATGCAAAGCTGTGCCTACGTTGTA--TCGTGATGGCC---TGAGAAAAGACTATA--CCCTCCAGGCGA----TCCCAACCC--ATGCGC-GTCG--ATCC--ACT----GGCGGCGGGTTGGAAT Hexalectris_grandiflora TCGAGACCGAAATAAAACACCGAGCGATTCGGAGAACCCGTGCATCGGCGAAGGCGGCGGCCGCCGCCGC-GCAGCATCCGTCCCGGTCGC-GGCCTCATCCCCCC---ACCGGG-GGGCGG---------CCACGATGGAGGACGGATGAGACACTCAAA-CCGGCG-CAGCCACGCGCCAAGGGAAAATATCGAGAAAACACGAGCCCCGCGTCGGG-CTCGGTGGCCCGGCGTGCCGTCGCACGCCATAGGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCTCCGATGAAGAACGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAGC--TCCATCC-----CGCCC------GATGGGCGTG-CGGGGGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCTCCGGCGCGGCGGGCTGAAGAGCGGGTG--ATCGTCTCATTGCGC-CCACGGACGACAAGGGGTGGATG---------GAACGAGGCCTGCGTTGTG--TCGTGCTGGCC---CGAGAAAAGATCACG-GCCCCCGAGGCGAGAGATCCCAGCCC--ATGCGCCGACGGCATCC--ACC----GGCGGCGGCTTGGAAT Hexalectris_revoluta TCGAGACCGAAATAAAACATCGAGCGACTCGGAGAACCCGTGCATCGGCGAAGGCGGCCGCTGCCGCCGC-GCAGCATCCGTCCCGGTCGC-GGCCTCATCCCCC----CAACGG-GGGGGG---------CCACGATGAGG--CGGATGAGACACTCACA-CCGGCG-CAGCCACGCGCCAAGGGA-GATATCGAGA-AACCCGAGCCC-GCGTCGGG-CTCTGTGGCCGGGCGTGCCGTCGCACGCCGTAGGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCGAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGCGCCAGC--TCCATCT-----CGCCA-----CGATGGGCGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCCGGCGCGGCGGGCTGAAGAGCGGGTG--ATCGTCTCATTGTG-CCGACGGACAACAATGGGTGGATG---------GAACGAGGCCTGCGTTGTG--CCGTGCTGGCC---CGAGAAAAGATCACG-GCCCCCGAGGCGAGAGATCCCAGCCC--ATGCGCCGACGGCATCC--ACC----GGTGGCGGCTTGGAAT Isochilus_linearis TCAAGAC-GA--TAAA-T-TCGAGCGATTCGGAAAACCCGTGAATGAAGC----CAGGGAGAGCGGCCCCTGGGAAAACCAGTCCGGTAGG-GGCTTTTTTTCCCCCAGGAGGGAGGGGGAGGGGCGGA--CCACGGCGAAGGGCGGTTGAAA-ACTCAAA-CCGGCG-CAGCCACGCGCCAAGGGA--ATATCGAGGA--CACGAGCCCTGCATCGGG-TTTCGTGGCGTGGGGTGCTGTTGCACGCCATATGGTT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGAT---------AGCGAAATGCGATACATGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAGC--TCAGTCC-----CACCC------CACGGGTGTGTCGGCCGAGGCCCGGACGTGCAGAGTGGCCCGTCGTGCCCGTCGGTGCGGCGGGCTGAAGAGTGGGTC--GTCATCTCATCACCGGCCGCGAGCAACTAGGGGTGGATG--CCATGCAAAGCTGTGCCTACGTTGTGCTTCGCGATGGCC---TGAGAATAGATTGCA--CCTTCCCGGCGA----TCCCGACCC--ATGCGCCGA-----TCCGAACC----GGCGGCGGCTTGGAAT Ponera_striata TCGAGACCGAGATGCAATATCGAGCGATTCGGAGAACCCGTGAATGAGCGA---CGGCCGCCGCCGTCGC-GGAACAGCCGTCCCGGCCGT-GGCCTCACCTCCC-----ATCGGTGGCGGCGGG------CCGCGATGCAGGGCGGATGAGA-ACTCAAA-CCGGCG-CAGCTACGCGCCAAGGGA--ATATCGA-AATTCACGAGCCCGGCGTCGGG-CCTCGTGGCGTGGGGTGCTGTTGCACGCCATATGGATGGATCGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTCGCGTCGCTCCGTGCCAGC--TCCATCC-----CGCCCT-----GACGGGTGCGTCGGCCGAGGCCCGGACGTGCAGAGTGGCCCGTCGTGCCCGCGGGCGCGGCGGGCTGAAGAGCGGGGGTCGTCGTCTCATCATCGGCCGCGAGCAACCAGGGGTGGATGCGCCATGCGGAGCTGTGCCTGCGTTGCG--TCGTCATGGCC---CGAGGAAAGATCGTACCCCCCACAGGCAGGCGATCCCAACCCCCATGCGCCGA-----TCC--ACT----GGCGGCGGCTTGGAAT ; END; BEGIN CODONS; CODONPOSSET * CodonPositions (CHARACTERS = ITS) = N: 1-721; CODONPOSSET CodonPositions (CHARACTERS = ITS) = N: 1-721; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M902] TITLE 'ITS-morph'; LINK TAXA = Taxa3; DIMENSIONS NCHAR=186; FORMAT DATATYPE=Standard SYMBOLS= "0 1 2 3 4 5 6 7" MISSING=? GAP= -; CHARSTATELABELS 151 Stem / c.winc vertical_corm horizontal_corm tuberoid_rhizomes aerial_and_compressed, 152 Stem / with_aerial_shoots without_aerial_shoots, 153 Stem / simple branched, 154 Sheathing_bract_texture / chartaceous coriaceous scarious, 155 Sheathing_bracts / Present_in_subterranean_stems Absent_from_subterranean_stems, 156 Leaves_at_flowering_period / present_and_absent always_absent, 157 Leaf_texture / chartaceous coriaceous fleshy, 158 Leaf_longitudinal_posture / conduplicate plicate, 159 Leaf_form / linear elliptic rounded, 160 Leaf_grouping / solitary in_groups, 161 Leaf_abaxial_color / green purple brownish, 162 Leaf_base / very_narrow wide sheathing, 163 Number_of_flowers_per_inflorescence / less_than_five six_to_10 '11 - 20' more_than_21, 164 Flower_size / small medium large, 165 Flower_shape / salverform campanulate ampliate, 166 Flower_position / erect ascending nodding, 167 Flower_mentum / present absent, 168 Sepal_position / spreading appressed reflexed revolute, 169 Sepal_color / yellow_to_orange pale_pink_to_purple cream_to_greenish cream_to_purplish ivory_white, 170 Dorsal_sepal_form / oblong elliptic lanceolate 'narrowly-elliptic', 171 Petal_form / oblong obovate elliptic lanceolate ovate, 172 Petal_position / spreading appressed revolute, 173 Petal_color / yellowish pinkish orange cream_with_purple purplish cream green white, 174 Lip_division / trilobed entire, 175 Lip_lateral_lobes / auriculate 'non-auriculate', 176 Lip_midlobe_position / curved_downward horizontal curved_upward, 177 Lip_callus / smooth crested hairy nerved, 178 Callus_color / same_color_as_lip different_color_as_lip, 179 Callus_crests_number / Less_than_five Five More_than_five, 180 Lip_midlobe_isthmus / present absent, 181 Column / winged not_winged, 182 Column_foot / present absent, 183 Column_position / horizontal bending upward, 184 Column / lyrate non_lyrate, 185 Pollinia_number / four eight, 186 Capsule_position / erect pendent horizontal, ; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 ] [ . . . . . . . . . . . . . . . . . . . ] Basiphyllaea_carabiaiana 030112013330032312301---1232-322-2030000031200201120313121-1121021222332301233233121112-03120233--2120201202--0221112030121123310032103121------------300?1000000220110021205011110111101? Basiphyllaea_hamiltoniana 03011201133303231230112112222221-123202201102200112211312111103221222112301033231121112201120231-22102000202--0121310010121121312032103001100111200323300?10101001{01}0221023306012111101101? Bletia_adenocarpa 0301100133320323303211011222032--1030000011000001102113101131010200203303010132311211102033203332-1-20001212--0321332212103123310032103303------------?10001011101202110000000111111{01}10110 Bletia_campanulata_s.l. 0301100103320321103212011222032--1030000011000001102113101131010202203303010132311211100033203332-1-20001212--032133221210312331003210310113011121032321000101110111101?112?10101121111110 Bletia_catenulata_s.l. 0101100333300333121011011222122221031000031000001-23113101111012212203303300332311211122013202132-1-22001202--132131203010112331003210310110011120032311010011110122201011211010111010{01}111 Bletia_coccinea -131100133320323303211011222032--1030000011000001102113101131010202-03303010132311211102033203332-1-20001212--0321332212103123310032103303------------?10101011101112010012020111111010110 Bletia_gracilis 0301100333320323103211011222032--1030000011000001102113101131010200003303010132313011102333203333-1-20001212--0321332212103323310032103303100111210020110101111111112011223150111121010110 Bletia_jucunda 0301100333320323103211------03-121030000011000001102113101131010200203303010132311211102033203332-1-20201212--0321332012103123310032103101------------110000011101012100121130101111{01}01110 Bletia_lilacina 23011021333223211032110200320-22-2030000031020022120113121131230012203323010132311211120033202332-1-20001212--032131001010112331201210310113011121002311000001{01}101102100111110101111001110 Bletia_macristhmochila 03011001033203211032120112220322-1030000011000001102313101131310302203303010132311211102033203332-1-20001212--0321332212103123310032103101230111210300?10101011101122000101040121110111110 Bletia_neglecta 23011021333223211032110200320-22-2010000031020022100113121131230010203323012132311211122033202332-1-20001212--03213320301111233-2012103101-30111210023110000011101112100111130101111001110 Bletia_parkinsonii 030110-133320323123211311222-322-203020013102000112011312-133012012203323210112311212122033202132-1-20201212--2321312010103123312012103101-00111200323110000011101312000133010101111000110 Bletia_punctata 03011001333203231232113112220322-2030200131020001120113121-33012012203323210132311212122033202132-1-20201212--2321312010103123312012103101------------110101111111312110210030011121010110 Bletia_purpurata 03011001333203231232113112220322-2030200131020001100113121-31012012203323210112311212122033202132-1-20201212--2321312010103123312012103101------------11000101110101021?113?41??1011?01111 Bletia_purpurea 23011001333223--11321---10200302-2010000031120222100113121131230012203323010132311211122033202332-1-20201212--0321310030101123312012103101100111200323110{01}0011110131210010411010111{01}011110 Bletia_reflexa 233110213332232110321---10200302-20300000310200221-0113121131230010003323010132333011102333203333-1-20001212--0321332212103323310032103303------------110000011101122102111140101111011110 Bletia_urbana 0301100103320321103212011222032--103000001100000110211310113101020220330301013231121110203320333--2120001212--0321332212103123310032103101------------?100?1011101112100001120101111011110 Chysis_bractescens 03002021330032231012-202--02232221020000013-0000132033330021101011220330301233333123132202312231--22000-02023203111300303011233100321232011111112103030112?0101101122110400070001121001111 Helleriella_guerrerensis 0300200103200223103031102222232201030020031-00001320333312331030312203322030113311231322033200310322203121100003003300303013113100--112321301330301323411??11011020021000230001040?1001102 Hexalectris_revoluta 0101120011220231111011002-----2221030221011220001213131322-112302122231232-231231121112201320233-2210000120232311--100101211212203-1312123100111300303010001??????211113102240011011011112 Isochilus_linearis 0000201101200002323331112202222201010020011-2200132033331233103031-203322011131111231322033120310122223--1100003203300321033113120321031213013-130132-410??0100100212210123011??013?112?01 Ponera_striata 23002001132002231210311023----21-1231022013-00-01222311312331030332201323232131111212122012222310322221121102221203100123011112203013123213013303113234100?0101101002111202031??413?102101 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M901] TITLE 'ITS-trnL'; LINK TAXA = Taxa3; DIMENSIONS NCHAR=150; FORMAT DATATYPE=Standard SYMBOLS= "0 1 2 3" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150] [ . . . . . . . . . . . . . . .] Basiphyllaea_carabiaiana 030112013330032312301???1232?322?2030000031200201120313121?1121021222332301233233121112?03120233??2120201202??0221112030121123310032103121???????????? Basiphyllaea_hamiltoniana 03011201133303231230112112222221?123202201102200112211312111103221222112301033231121112201120231?22102000202??0121310010121121312032103001100111200323 Bletia_adenocarpa 0301100133320323303211011222032??1030000011000001102113101131010200203303010132311211102033203332?1?20001212??0321332212103123310032103303???????????? Bletia_campanulata_s.l. 0301100103320321103212011222032??1030000011000001102113101131010202203303010132311211100033203332?1?20001212??0321332212103123310032103101130111210323 Bletia_catenulata_s.l. 0101100333300333121011011222122221031000031000001?23113101111012212203303300332311211122013202132?1?22001202??1321312030101123310032103101100111200323 Bletia_coccinea ?131100133320323303211011222032??1030000011000001102113101131010202?03303010132311211102033203332?1?20001212??0321332212103123310032103303???????????? Bletia_gracilis 0301100333320323103211011222032??1030000011000001102113101131010200003303010132313011102333203333?1?20001212??0321332212103323310032103303100111210020 Bletia_jucunda 0301100333320323103211??????03?121030000011000001102113101131010200203303010132311211102033203332?1?20201212??0321332012103123310032103101???????????? Bletia_lilacina 23011021333223211032110200320?22?2030000031020022120113121131230012203323010132311211120033202332?1?20001212??0321310010101123312012103101130111210023 Bletia_macristhmochila 03011001033203211032120112220322?1030000011000001102313101131310302203303010132311211102033203332?1?20001212??0321332212103123310032103101230111210300 Bletia_neglecta 23011021333223211032110200320?22?2010000031020022100113121131230010203323012132311211122033202332?1?20001212??03213320301111233?2012103101?30111210023 Bletia_parkinsonii 030110?133320323123211311222?322?203020013102000112011312?133012012203323210112311212122033202132?1?20201212??2321312010103123312012103101?00111200323 Bletia_punctata 03011001333203231232113112220322?2030200131020001120113121?33012012203323210132311212122033202132?1?20201212??2321312010103123312012103101???????????? Bletia_purpurata 03011001333203231232113112220322?2030200131020001100113121?31012012203323210112311212122033202132?1?20201212??2321312010103123312012103101???????????? Bletia_purpurea 23011001333223??11321???10200302?2010000031120222100113121131230012203323010132311211122033202332?1?20201212??0321310030101123312012103101100111200323 Bletia_reflexa 233110213332232110321???10200302?20300000310200221?0113121131230010003323010132333011102333203333?1?20001212??0321332212103323310032103303???????????? Bletia_urbana 0301100103320321103212011222032??103000001100000110211310113101020220330301013231121110203320333??2120001212??0321332212103123310032103101???????????? Chysis_bractescens 03002021330032231012?202??02232221020000013?0000132033330021101011220330301233333123132202312231??22000?0202320311130030301123310032123201111111210303 Helleriella_guerrerensis 0300200103200223103031102222232201030020031?00001320333312331030312203322030113311231322033200310322203121100003003300303013113100??112321301330301323 Hexalectris_revoluta 0101120011220231111011002?????2221030221011220001213131322?112302122231232?231231121112201320233?2210000120232311??100101211212203?1312123100111300303 Isochilus_linearis 0000201101200002323331112202222201010020011?2200132033331233103031?203322011131111231322033120310122223??1100003203300321033113120321031213013?130132? Ponera_striata 23002001132002231210311023????21?1231022013?00?0122231131233103033220132323213111121212201222231032222112110222120310012301111220301312321301330311323 ; END; BEGIN TREES; TITLE Tb8122; LINK TAXA = Taxa1; TRANSLATE 1 Ponera_striata, 2 Isochilus_linearis, 3 Chysis_bractescens, 4 Basiphyllaea_wrigthii, 5 Basiphyllaea_volubilis, 6 Basiphyllaea_sarcophylla, 7 Basiphyllaea_hoffmannii, 8 Basiphyllaea_hamiltoniana, 9 Basiphyllaea_corallicola, 10 Basiphyllaea_carabiaiana, 11 Hexalectris_warnockii, 12 Hexalectris_spicata, 13 Hexalectris_revoluta, 14 Hexalectris_parviflora, 15 Hexalectris_nitida, 16 Hexalectris_grandiflora, 17 Hexalectris_brevicaulis, 18 Bletia_urbana, 19 Bletia_tenuifolia, 20 Bletia_roezlii, 21 Bletia_riparia, 22 Bletia_reflexa, 23 Bletia_purpurea, 24 Bletia_purpurata, 25 Bletia_punctata, 26 Bletia_patula, 27 Bletia_parkinsonii, 28 Bletia_nelsonii, 29 Bletia_neglecta, 30 Bletia_macristhmochila, 31 Bletia_lilacina, 32 Bletia_jucunda, 33 Bletia_greenwoodiana, 34 Bletia_gracilis, 35 Bletia_florida, 36 Bletia_ensifolia, 37 Bletia_edwardsii, 38 Bletia_coccinea, 39 Bletia_catenulata_s.l., 40 Bletia_campanulata_s.l., 41 Bletia_antillana, 42 Bletia_amabilis, 43 Bletia_adenocarpa, 44 Helleriella_guerrerensis; TREE Strict_morphology = [&R] (44,((43,(42,41),(((((7,1),(6,2)),4),5),3)),(40,((((((((((39,(37,34)),38),(32,29,28,26,(25,24),20,19,18),15),16),(33,30)),((36,27),((35,((31,22),17)),23))),21),14,(11,8)),13),12,10,9)))); END; BEGIN TREES; TITLE Tb8121; LINK TAXA = Taxa2; TRANSLATE 1 Ponera_striata, 2 Isochilus_linearis, 3 Hexalectris_revoluta, 4 Hexalectris_grandiflora, 5 Helleriella_guerrerensis, 6 Chysis_bractescens, 7 Bletia_urbana, 8 Bletia_reflexa, 9 Bletia_purpurea, 10 Bletia_purpurata, 11 Bletia_punctata, 12 Bletia_parkinsonii, 13 Bletia_neglecta, 14 Bletia_machristmochila, 15 Bletia_lilacina, 16 Bletia_jucunda, 17 Bletia_gracillis, 18 Bletia_coccinea, 19 Bletia_catenulata, 20 Bletia_campanulata, 21 Bletia_adenocarpa, 22 Basiphyllaea_hamiltonii, 23 Basiphyllaea_carabiaiana; TREE ITS_consensus = [&R] ((((23,(22,(4,3))),((((21,18,17),16,(7,(20,14))),(((15,13),(9,8)),((12,11),10))),19)),(5,(2,1))),6); END; BEGIN TREES; TITLE Tb8120; LINK TAXA = Taxa3; TRANSLATE 1 Ponera_striata, 2 Isochilus_linearis, 3 Hexalectris_revoluta, 4 Helleriella_guerrerensis, 5 Chysis_bractescens, 6 Bletia_urbana, 7 Bletia_reflexa, 8 Bletia_purpurea, 9 Bletia_purpurata, 10 Bletia_punctata, 11 Bletia_parkinsonii, 12 Bletia_neglecta, 13 Bletia_macristhmochila, 14 Bletia_lilacina, 15 Bletia_jucunda, 16 Bletia_gracilis, 17 Bletia_coccinea, 18 Bletia_catenulata_s.l., 19 Bletia_campanulata_s.l., 20 Bletia_adenocarpa, 21 Basiphyllaea_hamiltoniana, 22 Basiphyllaea_carabiaiana; TREE 'ITS-trnL 3' = [&R] (5,((3,(21,(22,(18,(((15,(16,(20,17))),(6,(19,13))),(((14,12),(8,7)),(9,(11,10)))))))),(1,(2,4)))); TREE 'ITS-trnL 2' = [&R] (5,((3,(21,(22,(18,((15,((17,(20,16)),(6,(19,13)))),(((14,12),(8,7)),(9,(11,10)))))))),(1,(2,4)))); TREE 'ITS-trnL 1' = [&R] (5,((3,(21,(22,(18,((15,((16,(20,17)),(6,(19,13)))),(((14,12),(8,7)),(9,(11,10)))))))),(1,(2,4)))); END; BEGIN TREES; TITLE Tb8119; LINK TAXA = Taxa3; TRANSLATE 1 Ponera_striata, 2 Isochilus_linearis, 3 Hexalectris_revoluta, 4 Helleriella_guerrerensis, 5 Chysis_bractescens, 6 Bletia_urbana, 7 Bletia_reflexa, 8 Bletia_purpurea, 9 Bletia_purpurata, 10 Bletia_punctata, 11 Bletia_parkinsonii, 12 Bletia_neglecta, 13 Bletia_macristhmochila, 14 Bletia_lilacina, 15 Bletia_jucunda, 16 Bletia_gracilis, 17 Bletia_coccinea, 18 Bletia_catenulata_s.l., 19 Bletia_campanulata_s.l., 20 Bletia_adenocarpa, 21 Basiphyllaea_hamiltoniana, 22 Basiphyllaea_carabiaiana; TREE combined_tree = [&R] (5,((3,(21,(22,(18,((15,((16,(20,17)),(19,(13,6)))),((9,(11,10)),((14,12),(8,7)))))))),(1,(2,4)))); END;