#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on April 25, 2024; 9:39 GMT TreeBASE (cc) 1994-2008 Study reference: Soreng R., Davis J., & Doyle J. 1990. A phylogenetic analysis of chloroplast DNA restriction site variation in Poaceae subfam. Pooideae. Plant Systematics and Evolution, 172: 83-97. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S187] BEGIN TAXA; TITLE Taxa1; DIMENSIONS NTAX=45; TAXLABELS Arctagrostis_latifolia Arctagrostis_poaeoides Arrhenatherum_elatius Avena_sativa Bellardiochloa_violacea Brachypodium_pinnatum Briza_media Briza_minor Bromus_inermis Catabrosa_aquatica Chascolytrum_erectum Chascolytrum_subaristata Dactylis_glomerata Danthonia_californica Deschampsia_cespitosa Festuca_arundinacea Festuca_pratensis Glyceria_grandis Glyceria_striata Hordeum_vulgare Leucopoa_karatavica Leucopoa_sclerophylla Lolium_multiflorum Melica_altissima Melica_cupanii Microbriza_poaemorpha Oryza_sativa_A Oryza_sativa_B Pennisetum_americanum Piptatherum_miliaceum Poa_lanigera Poa_palustris Puccinellia_distans Puccinellia_gigantea Schizachne_purpurascens Sclerochloa_dura Secale_cereale Sesleria_coerulea Sorghum_bicolor Stipa_barbata Stipagrostis_uniplumis Torreychloa_pauciflora Torreyochloa_erecta Triticum_aestivum Zea_mays ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M334] TITLE Table_2; LINK TAXA = Taxa1; DIMENSIONS NCHAR=91; FORMAT DATATYPE=Standard SYMBOLS= "0 1" MISSING=- GAP= "; MATRIX [ 10 20 30 40 50 60 70 80 90 ] [ . . . . . . . . . ] Arctagrostis_latifolia 0110110000100110010100001010001000110100011000011000000011000100111011100000000000001000001 Arctagrostis_poaeoides 0110110000100110010100001010001000110100011000011000000011000100111011100000000000001000001 Arrhenatherum_elatius 0110110000101110010100001010001000100100101100011100000011000110011011100000100001001101011 Avena_sativa -----------------101000010100010001001001011001011----------0110001011000------------------ Bellardiochloa_violacea 0110110000100111010000001010001000110100001000011000000011000100111011100000000000001000000 Brachypodium_pinnatum 0110110001101100010110001100001000110100001000010000000110010100011001100100100100001000011 Briza_media 0110110000101110010100001010001000100100101100011100000011000110011011100000100001001101011 Briza_minor 0110110000101110010100001010001000100100101100011100000011000110011011100000100001001101011 Bromus_inermis 0100110001100110010110011011011000000100000000010000000011010100011001110100100100001000011 Catabrosa_aquatica 0110110000100111010100000010001100110100011000001000000011000100011011100000100000000010011 Chascolytrum_erectum 0110110000101110010100101010001000100100101100011100000011001110011011100000100001001101010 Chascolytrum_subaristata 0110110000101110010100101010001000100100101100011100000011001110011011100000100001001101010 Dactylis_glomerata 0110110000100110010100001010001000110100001000011000000011000100111011100000000000001000001 Danthonia_californica 0111100100001100000011000110101000000100001000101011011010010000001001100100100010010000010 Deschampsia_cespitosa 0110110000101110010100001010001000100100101100011100000011001110011011100000100001001101010 Festuca_arundinacea 0110010000100111010100001010001000110100001000010000000011000100111011100001100000101000010 Festuca_pratensis --------------------------------------------------0000001100------------------------------- Glyceria_grandis 1110110000000110001110101100101000110110001000101000000110000100011001100010101100001000110 Glyceria_striata 1110110000000110000110101100101000110110001000101000100110000100011001100010101100001000110 Hordeum_vulgare 010011-----------10100011011011000000000000000000000000011010100010111000------------------ Leucopoa_karatavica 0110010000100111010100001010001000110100001000010000000011000100111011100001100000101000010 Leucopoa_sclerophylla 0110010000100111010100001010001000110100001000010000000011000100111011100001100000101000010 Lolium_multiflorum --------------------------------------------------0000001100------------------------------- Melica_altissima 1010110000010110001110101100000000110110001000101000100010000100010001100010101100000000110 Melica_cupanii 1010110000010110001110101100000000110110001000101000100100000100010001100010101100000000110 Microbriza_poaemorpha 011011-----------10100101010001000100100101000011100000011001110011011100000100001001101010 Oryza_sativa_A ------------------------------1000100100001000001000001010010000010010001------------------ Oryza_sativa_B 0111100000101100010010001011101000100100001000001000001010010000010011001000100100000001010 Pennisetum_americanum ------01000010000-------------------------------------------0000011001100------------------ Piptatherum_miliaceum 0110110010001110110110001110100000000100001000011000010010000100011001100000110100001000011 Poa_lanigera 0110111000100110010100001010001000110101011000011000100011010100111011100000000000001000001 Poa_palustris 0110111000100010010100001010001000110101011000001000000011010100111011100000000000001000001 Puccinellia_distans 0110110000100111010100000010001100110100010000001000000011000100011011100000100000000010011 Puccinellia_gigantea 0110110000100111010100000010001100110100010000001000000011000100011011100000100000000010011 Schizachne_purpurascens -----------------00110101100000000110110001000001000100110000100011001100010101100000000110 Sclerochloa_dura 0110110000100111010100000010001100110100011000001000000011000100011011100000100000000010011 Secale_cereale -----------------101000110110110000001000000100100----------0100011111000------------------ Sesleria_coerulea 0110110000100111010100001010001000110100011000001000000010000100111011100000100000001000011 Sorghum_bicolor ------------------------------10110011000010011010----------0001011000111------------------ Stipa_barbata 0110110010001110110110001110100000000100001000011000000010000100001001100000110100001000011 Stipagrostis_uniplumis 0111100001001100010011001110001000000000001000101011011010010000011011100100011010010000010 Torreychloa_pauciflora 0110110000101110010100001010001000100100101100011100000011100010011011100000000001001101010 Torreyochloa_erecta 0110110000101110010100001010001000100100101100011100000011100010011011100000000001001101010 Triticum_aestivum -----------------101000110110110000001000000100100----------0100011111000------------------ Zea_mays ------------------------------1011101100001001101001001000010001011000111------------------ ; END; BEGIN TREES; TITLE Tb4915; LINK TAXA = Taxa1; TRANSLATE 1 Danthonia_californica, 2 Arrhenatherum_elatius, 3 Deschampsia_cespitosa, 4 Briza_minor, 5 Chascolytrum_erectum, 6 Torreyochloa_erecta, 7 Brachypodium_pinnatum, 8 Bromus_inermis, 9 Glyceria_grandis, 10 Glyceria_striata, 11 Melica_altissima, 12 Melica_cupanii, 13 Arctagrostis_poaeoides, 14 Bellardiochloa_violacea, 15 Catabrosa_aquatica, 16 Dactylis_glomerata, 17 Festuca_arundinacea, 18 Leucopoa_sclerophylla, 19 Poa_lanigera, 20 Poa_palustris, 21 Puccinellia_distans, 22 Sclerochloa_dura, 23 Sesleria_coerulea, 24 Piptatherum_miliaceum, 25 Stipa_barbata, 26 Hordeum_vulgare, 27 Stipagrostis_uniplumis, 28 Oryza_sativa_A, 29 Oryza_sativa_B, 30 Sorghum_bicolor, 31 Zea_mays, 32 Pennisetum_americanum, 33 Avena_sativa, 34 Briza_media, 35 Chascolytrum_subaristata, 36 Microbriza_poaemorpha, 37 Torreychloa_pauciflora, 38 Schizachne_purpurascens, 39 Arctagrostis_latifolia, 40 Festuca_pratensis, 41 Leucopoa_karatavica, 42 Lolium_multiflorum, 43 Puccinellia_gigantea, 44 Secale_cereale, 45 Triticum_aestivum; TREE Fig._2 = [&R] ((1,((9,(10,(11,12)))Meliceae,((25,24),((7,(8,26))Triticodae,((4,2,(6,(5,3)))Aveneae,(((17,18),(14,(16,(39,(19,20))))),(23,(21,22,15)))Poeae))))Pooideae)); END;