#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on April 18, 2024; 4:36 GMT TreeBASE (cc) 1994-2008 Study reference: Schubert K., Braun U., Groenewald J.Z., & Crous P.W. 2007. Cladosporium leaf-blotch and stem rot of Paeonia spp. caused by Dichocladosporium chlorocephalum gen. nov. Studies in Mycology, 58: 95-104. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S1896] BEGIN TAXA; TITLE Taxa1; DIMENSIONS NTAX=26; TAXLABELS Botryosphaeria_ribis Botryosphaeria_stevensii Cercospora_apii Cercospora_beticola Cladosporium_bruhnei Cladosporium_herbarum Cladosporium_iridis Cladosporium_macrocarpum Cladosporium_ossifragi Cladosporium_tenellum Cladosporium_variabile Dichocladosporium_chlorocephalum_CBS_100405 Dichocladosporium_chlorocephalum_CBS_213.73 Dichocladosporium_chlorocephalum_CPC_11383 Dichocladosporium_chlorocephalum_CPC_11969 Mycosphaerella_aurantia Mycosphaerella_punctiformis Passalora_arachidicola Passalora_fulva Readeriella_mirabilis Readeriella_novaezelandiae Teratosphaeria_microspora Teratosphaeria_readeriellophora Trimmatostroma_abietina Trimmatostroma_abietis Trimmatostroma_salicis ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M3766] TITLE ITS; LINK TAXA = Taxa1; DIMENSIONS NCHAR=743; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Botryosphaeria_ribis --------------------------------------------------------------------------------------------------------------------------------GGAAGGATCATTACC-GAGTTGAT---TCGAGC----------------------------------------------------TCC--GGCTCGAC------------TCTCCCACCCAATGTGTACCTACCTCTGTTGCTTTGGCGGGCCGCGGTCCTCCGCACCGGCGCCCTTCGGGGGGCTGGCCAGCGCCCGCCAGAGGACCATAAAA-CTCCAGTCAGTGAACTTCGCAGTCTGAGAA--ACAA-GTTAATAAAC-TAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCTCTGCTTGGTATTGGGCTCCGTCCTCCAC-----GGACGCGCCTTAAAGACCTCGGCGGTGGC-GTCTTGCC-TCAAGCGTAGTAGAAAA--CACCTCGCTTTGGAGCG--CACGGCGTCGCCCGCCGGACGAACCTTTGAATTATTTCTC-AAGGTTGACCTCGGAT------------ Botryosphaeria_stevensii --------------------------------------------------------------------------------------------------------------------------------------ATCATT-CC-GAGTTCTC-----GGGC----------------------------------------------------TTC--GGCCCGAA------------TCTCCCACCCTTTGTGAACATACCTCTGTTGCTTTGGCGGCTCTTGCCGC---GTGGAGGCCCTCAAAAGCCCCCCCGCGCGCTTCCGCCAGAGGACCTTCAAA-CTCCAGTCAGTAAACGTCGACGTCTGAAAA--ACAA-GTTAATAAAC-TAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCGCCGTCCTCTCT---GCGGACGCGCCTCAAAGACCTCGGCGGTGGCTGTTCAGCCCTCAAGCGTAGTAGAATA--CACCTCGCTTTGGAGTG--GTTGGCGTCGCCCGCCGGACGAACCTTCTGAACTTTTCTC-AAGGTTGACCTCGGAT------------ Cercospora_apii ------------------------------------------------------------------------------------------------------------------------------------GGATCATTACT-GAGT-------GAGGGC---------------------------------------------------CTTCG-GGCTCGA-------------CCTCCAACCCTTTGTGA-ACACAACTTGTTGCTTCGGGGGCGACCCTGCC--GTTTCGACGGC----GAGCG-CCCCCGGAGGCCT-------------TCAAA-CACT-GCA-----TCTTTGC-GTCGGAGTT--TAA--GTAAATTAAA-CAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTCGCTTGGTATTGGGCGCCGCGGTGT------TCCGCGCGCCTCAAAGTCTCCGGCTGAGCTGTCCGTCTC--TAAGCGTTGTGATTTCA-TTAATCGCTTCGGAGCG--CGGGCGGTCGCG-GCCGTTAAATC----------TTTCAC-AAGGTTGACCTCGGATCAGGTAGGGATA Cercospora_beticola ------------------------------------------------------------------------------------------------------------------------------------GGATCATTACT-GAGT-------GAGGGC---------------------------------------------------CTTCG-GGCTCGA-------------CCTCCAACCCTTTGTGA-ACACAACTTGTTGCTTCGGGGGCGACCCTGCC--GTTTCGACGGC----GAGCG-CCCCCGGAGGCCT-------------TCAAA-CACT-GCA-----TCTTTGC-GTCGGAGTT--TAA--GTAAATTAAA-CAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTCGCTTGGTATTGGGCGCCGCGGTGT------TCCGCGCGCCTCAAAGTCTCCGGCTGAGCTGTCCGTCTC--TAAGCGTTGTGATTTCA-TTAATCGCTTCGGAGCG--CGGGCGGTCGCG-GCCGTTAAATC----------TTTCAC-AAGGTTGACCTCGGATCAGGTAGGGATA Cladosporium_bruhnei ---------------------------------------------------------------------------------------------------------------------GGTGAACCTGCGGAGGGATCATTACA--AGA--ACGCCC-GGGC----------------------------------------------------TTC--GGCCTGGTTA----------TTCATAACCCTTTGTTG-TCCGACTCTGTTGCCTCCGGGGCGACCCTGCC----TTCGGG-------CGGGGGCTCCGGGTGGACACT-----------TCAAA-CTCTTGCGTA---ACTTTGCAGTCTGAGTAAACTTAATTAA-TAAAT-TAAAACTTTTAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTCGCTTGGTATTGGGCAACGCGGTCC------GCCGCGTGCCTCAAATCGTCCGGCTGGGTCTTCTGTCCCC-TAAGCGTTGTGGAAAC--TATT-CGCTAAAGGGTGTTCGGGAGG-CTAC-GCCGTAAAACAA----CCCCATTTCT--AAGGTTGACCTCGGATCAGGT------- Cladosporium_herbarum ----------------------------------------------------------------------------------------------------------------------------------AGGGATCATTACA--AGA--ACGCCC-GGGC----------------------------------------------------TTC--GGCCTGGTTA----------TTCATAACCCTTTGTTG-TCCGACTCTGTTGCCTCCGGGGCGACCCTGCC----TTCGGG-------CGGGGGCTCCGGGTGGACACT-----------TCAAA-CTCTTGCGTA---ACTTTGCAGTCTGAGTAAACTTAATTAA-TAAAT-TAAAACTTTTAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTCGCTTGGTATTGGGCAACGCGGTCC------GCCGCGTGCCTCAAATCGTCCGGCTGGGTCTTCTGTCCCC-TAAGCGTTGTGGAAAC--TATT-CGCTAAAGGGTGTTCGGGAGG-CTAC-GCCGTAAAACAA----CCCCATTTCT--AAGGTTGACCTCGGATCAGGTAGGGATA Cladosporium_iridis --------------------------------------------------------------------------------------------------------------------------------------ATCATTACA--AGA--ACGCCC-GGGC----------------------------------------------------TTC--GGCCTGGTTA----------TTCATAACCCTTTGTTG-TCCGACTCTGTTGCCTCCGGGGCGACCCTGCC----TTCGGG-------CGGGGGCTCCGGGTGGACACT-----------TCAAA-CTCTTGCGTA---ACTTTGCAGTCTGAGTAAACTTAATTAA-TAAAT-TAAAACTTTTAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTCGCTTGGTATTGGGCAACGCGGTCC------GCCGCGTGCCTCAAATCGTCCGGCTGGGTCTTCTGTCCCC-TAAGCGTTGTGGAAAC--TATT-CGCTAAAGGGTGTTCGGGAGG-CTAC-GCCGTAAAACAA----CCCCATTTCT--AAGGTTGACC------------------ Cladosporium_macrocarpum --------------------------------------------------------------------------------------------------------------------------------------ATCATTACA--AGA--ACGCCC-GGGC----------------------------------------------------TTC--GGCCTGGTTA----------TTCATAACCCTTTGTTG-TCCGACTCTGTTGCCTCCGGGGCGACCCTGCC----TTCGGG-------CGGGGGCTCCGGGTGGACACT-----------TCAAA-CTCTTGCGTA---ACTTTGCAGTCTGAGTAAACTTAATTAA-TAAAT-TAAAACTTTTAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTCGCTTGGTATTGGGCAACGCGGTCC------GCCGCGTGCCTCAAATCGTCCGGCTGGGTCTTCTGTCCCC-TAAGCGTTGTGGAAAC--TATT-CGCTAAAGGGTGTTCGGGAGG-CTAC-GCCGTAAAACAA----CCCCATTTCT--AAGGTTGACC------------------ Cladosporium_ossifragi --------------------------------------------------------------------------------------------------------------------------------------ATCATTACA--AGA--ACGCCC-GGGC----------------------------------------------------TTC--GGCCTGGTTA----------TTCATAACCCTTTGTTG-TCCGACTCTGTTGCCTCCGGGGCGACCCTGCC----TTCGGG-------CGGGGGCTCCGGGTGGACACT-----------TCAAA-CTCTTGCGTA---ACTTTGCAGTCTGAGTAAACTTAATTAA-TAAAT-TAAAACTTTTAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTCGCTTGGTATTGGGCAACGCGGTCC------GCCGCGTGCCTCAAATCGTCCGGCTGGGTCTTCTGTCCCC-TAAGCGTTGTGGAAAC--TATT-CGCTAAAGGGTGTTCGGGAGG-CTAC-GCCGTAAAACAA----CCCCATTTCT--AAGGTTGACC------------------ Cladosporium_tenellum --------------------------------------------------------------------------------------------------------------------------------GGAGGGATCATTACA--AGA--ACTTCC-GGGC----------------------------------------------------TTC--GGCCTGGTTA----------TTCATAACCCTTTGTTG-TCCGACTCTGTTGCCTCCGGGGCGACCCTGCC----TTCGGG-------CGGGGGCTCCGGGTGGACACT-----------TCAAA-CTCTTGCGTA---ACTTTGCAGTCTGAGTAAACTTAATTAA-TAAAT-TAAAACTTTTAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTCGCTTGGTATTGGGCAACGCGGTCC------GCCGCGTGCCTCAAATCGTCCGGCTGGGTCTTCTGTCCCC-TAAGCGTTGTGGAAAC--TATT-CGCTAAAGGGTGTTCGGGAGG-CTAC-GCCGTAAAACAA----CCCCATTTCT--AAGGTTGACCTCGGATCAGGTAGGGATA Cladosporium_variabile ------------------------------------------------------------------------------------AGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATCATTACA--AGA--ACGCCC-GGGC----------------------------------------------------TTC--GGCCTGGTTA----------TTCATAACCCTTTGTTG-TCCGACTCTGTTGCCTCCGGGGCGACCCTGCC----TTCGGG-------CGGGGGCTCCGGGTGGACACT-----------TCAAA-CTCTTGCGTA---ACTTTGCAGTCTGAGTAAACTTAATTAA-TAAAT-TAAAACTTTTAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTCGCTTGGTATTGGGCAACGCGGTCC------GCCGCGTGCCTCAAATCGTCCGGCTGGGTCTTCTGTCCCC-TAAGCGTTGTGGAAAC--TATT-CGCTAAAGGGTGTTCGGGAGG-CTAC-GCCGTAAAACAA----CCCCATTTCT--AAGGTTGACCTCGGATCAGGTAGGGATA Dichocladosporium_chlorocephalum_CBS_100405 ATGGCTCAGTGAGGCCTTCGGACTGGCCCAGGGAGGTCGGCAACGACCACCCAGGGCCGGAAAGTTCGTCAAACTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATCATTAATTGAATATGCGCCGAGGGCGCCACCCCTCCGGGGGATCAATGGCGTGCCGAAGCACTCCCTCCCGCGGCCGGCCTCGGCCACCGTGGGAGGTGAATCATATAACCCAATGTTG-TCCGACCGTGTTGCCTCGGGGGCGACCCTGCC----TTTGGGCT-----CGGGGGTCCCCGGTGGACATTA----------CCAAAACTCTTGCGTA---TCTTTGTCGTCTGAGTG--ATTATATCAATCAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTCGCTTGGTATTGGGCGACGCGGTCC------GCCGCGCGCCCCAAATCGACCGGCTGGGTCGATCGTCCCCTCA-GCGTTGTGGAAA---CTATTCGCCGAAGGGTT-TGACGGTCGGTCACGCCGCAAAACAAAA--CCTCATTTCT--AAGGTTGACCTCGGATCAGGTAGGGATA Dichocladosporium_chlorocephalum_CBS_213.73 ATGGCTCAGTGAGGCCTTCGGACTGGCCCAGGGAGGTCGGCAACGACCACCCAGGGCCGGAAAGTTCGTCAAACTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATCATTAATTGAATATGCGCCGAGGGCGCCACCCCTCCGGGGGATCAATGGCGTGCCGAAGCACTCCCTCCCGCGGCCGGCCTCGGCCACCGTGGGAGGTGAATCATATAACCCAATGTTG-TCCGACCGTGTTGCCTCGGGGGCGACCCTGCC----TTTGGGCT-----CGGGGGTCCCCGGTGGACATTA----------CCAAAACTCTTGCGTA---TCTTTGTCGTCTGAGTG--ATTATATCAATCAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTCGCTTGGTATTGGGCGACGCGGTCC------GCCGCGCGCCCCAAATCGACCGGCTGGGTCGATCGTCCCCTCA-GCGTTGTGGAAA---CTATTCGCCGAAGGGTT-TGACGGTCGGTCACGCCGCAAAACAAAA--CCTCATTTCT--AAGGTTGACCTCGGATCAGGTAGGGATA Dichocladosporium_chlorocephalum_CPC_11383 ----------------------------------------------------------------------------------------------------------------------------------AGGGATCATTAATTGAATATGCGCCGAGGGCGCCACCCCTCCGGGGGATCAATGGCGTGCCGAAGCACTCCCTCCCGCGGCCGGCCTCGGCCACCGTGGGAGGTGAATCATATAACCCAATGTTG-TCCGACCGTGTTGCCTCGGGGGCGACCCTGCC----TTTGGGCT-----CGGGGGTCCCCGGTGGACATTA----------CCAAAACTCTTGCGTA---TCTTTGTCGTCTGAGTG--ATTATATCAATCAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTCGCTTGGTATTGGGCGACGCGGTCC------GCCGCGCGCCCCAAATCGACCGGCTGGGTCGATCGTCCCCTCA-GCGTTGTGGAAA---CTATTCGCCGAAGGGTT-TGACGGTCGGTCACGCCGCAAAACAAAA--CCTCATTTCT--AAGGTTGACCTCGGATCAGGTAGGGATA Dichocladosporium_chlorocephalum_CPC_11969 ---------------------------------------------------------------------------------------------------------------------GGTGAACCTGCGGAGGGATCATTAATTGAATATGCGCCGAGGGCGCCACCCCTCCGGGGGATCAATGGCGTGCCGAAGCACTCCCTCCCGCGGCCGGCCTCGGCCACCGTGGGAGGTGAATCATATAACCCAATGTTG-TCCGACCGTGTTGCCTCGGGGGCGACCCTGCC----TTTGGGCT-----CGGGGGTCCCCGGTGGACATTA----------CCAAAACTCTTGCGTA---TCTTTGTCGTCTGAGTG--ATTATATCAATCAAATTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTCGCTTGGTATTGGGCGACGCGGTCC------GCCGCGCGCCCCAAATCGACCGGCTGGGTCGATCGTCCCCTCA-GCGTTGTGGAAA---CTATTCGCCGAAGGGTT-TGACGGTCGGTCACGCCGCAAAACAAAA--CCTCATTTCT--AAGGTTGACCTCGGATCA---------- Mycosphaerella_aurantia ----------------------------------------------------------------------------------------------------------------------------------AGGGATCATTACT-GAGT-------GAGGGC-----------------------------------------------------TCA-CGCCCGA-------------CCTCCAACCCTTTGTGA-ACCAACTCTGTTGCTTCGGGGGCGACCCCGCC--GTTTCGGCGA-----CGGCG-CCCCCGGAGGTCA-------------TCAAA-CACT-GCA-----TCTTTGC-GTCGGAGTC--TTAAAGTAAATTTAAACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTAGCTTGGTATTGGGCGTCGCGGT--------TCCGCGCGCCTTAAAGTCTCCGGCTGAGCAGTTCGTCTC--TAAGCGTTGTGGCATA--TATTTCGCTGAAGAGTT--CGGACGGCTTTTGGCCGTTAAATC----------TTTCTT-AAGGTTGACCTCGGATCAGGTAGGGATA Mycosphaerella_punctiformis ----------------------------------------------------------------------------------------------------------------------------------AGGGATCATTACT-GAGT-------GAGGGC----------------------------------------------------TTCC-GGCCCGA-------------CCTCCAACCCTTTGTGA-ACACATCTTGTTGCTTCGGGGGCGACCCTGCC--GTT-CG-CGG-----CATTC-CCCCCGGAGGTCA-------------TCAAAACACT-GCA-----TTCTTAC-GTCGGAGTA--AAAA-GTTAATTTAA-TAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTCGCTTGGTATTGGGCGTCGCGAGTCT-----CTCGCGCGCCTCAAAGTCTCCGGCTGTGCGGTTCGTCTC--CCAGCGTTGTGGCAAC--TATTTCGCAGTGGAGTT--CGAGTCGTCGTG-GCCGTTAAATC----------TTTCA--AAGGTTGACCTCGGATCAGG-------- Passalora_arachidicola ------------------------------------------------------------------------------------------------------------------------------------GGATCATTACT-GAGT-------GAGGGC-----------------------------------------------------GCG-AGC-CGA-------------CCTCCAACCCTTTGTGC-ACCAACTCTGTTGCTTCGGGGGCGACCCCGCC--GTCTGGGCGA-----CGGCG-CCCCCGGAGGTCG-------------TCAAAACACT-GCA-----TCTCTGC-GTCGGAGTC--GTCAAGTAAATTGAAACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTAGCTTGGTATTGGGCGTCGCGGT--------TCCGCGCGCCTTAAAGTCTCCGGCTGAGCAGTCCGTCTC--TAAGCGTTGTGGCACA--TATTTCGCTGCAGAGTC--CGGGCGGCTTTCGGCCGTTAAATC----------TTTCTC-AAGGTTGACCTCGGATCAGGTAGGGATA Passalora_fulva ------------------------------------------------------------------------------------------------------------------------------------GGATCATTACT-GAGT-------GAGGGC-----------------------------------------------------TCA-CGCCCGA-------------CCTCCAACCCTCTGTGA-ACCAACTCTGTTGCTTCGGGGGCGACCCCGCC--GTTTCGGCGA-----CGGCG-CCCCCGGAGATCA-------------TCAAA-CACT-GCA-----TCTTTGC-GTCGGAGTC--TTAAAGTAAATTTAAACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTAGCTTGGTATTGGGCGTCGCGGT--------TCCGCGCGCCTTGAAGTCTCCGGCTGAGCAGTTCGTCTC--TAAGCGTTGTGGCATA--TATTTCGCTAAAGAGTT--CGGGCGGCTTTTGGCCGTTAAATC----------TTTTCA-AAGGTTGACCTCGGATCAGGTAGGGATA Readeriella_mirabilis ------------------------------------------------------------------------------------------------------------------------------------GGATCATTAAT-GAGT-------GACGGC---------------------------------------------------TCTCTGAGCCCAA-------------CCTCCAACCCCATGTTG-TCCGACTCTGTTGCCTCGGGGGCGACCCGGCC---TCACGGCCG-----CGGG--CCCCCGGTGGACTAC-----------TCAA--CTCT-GCA-----TCTTAGC-GTCTGAGTT--TAATTATAAATCAAT-TAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCAATCAAGCCTGGCTTGGTATTGGGCGCCGTGGTTCTCCGGAGCCGCGTGCCCTAATGTCCTCGGCTGGGCCGTCCGCCTC--GAAGCGTTGTGATAATA-CAGATCGCTTGTGGGTG--TGGACGGTCGCGCGCCGTAAAACC--------TTTTACTC-AAGGTTGACCTCGGATCAGGTAGGGATA Readeriella_novaezelandiae ---------------------------------------------------------------------------------------------------------------TCCGTAGGTGAACCTGCGGAGGGATCATTACT-GAGT-------GAGGGC---------------------------------------------------CCTCGCGGTCCGA-------------CCTCCAACCCTTTGTTG-TCCGACCATGTTGCCTCGGGGGCGACCCGGCC---CTACGGCCG-----CGGG--CCCCCGGTGGACTAC-----------TCAA--CTCT-GCA-----TCTTAGC-GTCTGAGTT--TAATGATAAATCAAT-TAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCAATCAAGCCTGGCTTGGTATTGGGCGCCGTGGTTCTCCGGAGCCGCGCGCCCTAATGTCCTCGGCTGGGCCGTCCGCCTC--GAAGCGTTGTGATTATA-CAGATCGCTTGTGGGTG--TGGACGGTCGCGCGCCGTTAAACC--------TTTCATTC-AAGGTTGACCTCGGATCAGGTAGGGATA Teratosphaeria_microspora ----------------------------------------------------------------------------------------------------------------------------------AGGGATCATTACT-GAGT-------GAGGGC----------------------------------------------------TTCT-GGCCCGA-------------CCTCCAACCCCATGTTA-TCTGACACTGTTGCCTCCGGGGCGACCCGGCCTGCCTTCGGGCGT--TTCGGGG-CCCCGGGTGGACCAT-----------TCAA--CTCT-GCA-----TCTTTGC-GTCTGAGTA--AATGATTGAATCAAT-CAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCCTCGCTTGGTATTGGGCGCCGCGGTCC------GCCGCGCGCCTCAATGTTTCCGGCTGAGCTCTCTGTCTC--TAAGCGTTGTGGTTGAAACTATCCGCTTGCGAGAT--CGGG-GGCGTCTGGCCGTTAA-CC---------ATTACTCAAAGGTTGACCTCGATTCAGGTAGGGATA Teratosphaeria_readeriellophora ----------------------------------------------------------------------------------------------------------------------------------AGGGATCATTACT-GAGT-------GAGGGC---------------------------------------------------CCTCG-GGTCCGA-------------CCTCCAACCCCATGTTG-TCCGACTCTGTTGCCTCGGGGGCGACCCGGCC---TTACGGCCG-----CGGG--CCCCCGGTGGACTAC-----------TCAA--CTCT-GCA-----TCTTAGC-GTCTGAGTT--TAATTATAAATCAAT-TAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCAATCAAGCCTGGCTTGGTATTGGGCGCCGTGGTTCTTCGGAGCCGCGCGCCCTAATGTCCTCGGCTGGGCCGTCCGCCTC--GAAGCGTTGTGATAATA-CAGATCGCTTGTGGGTG--TGGACGGTCGCGCGCCGTAAAACC--------TTTT-TTC-AAGGTTGACCTCGGATCAGGTAGG---- Trimmatostroma_abietina --------------------------------------------------------------------------------------------------------------------------------------ATCATTACT-GAGT-------GAGGGC----------------------------------------------------CTCT-GGCCCGA-------------CCTCCAACCCCATGTTA-TCTGACACTGTTGCCTCCGGGGCGACCCGGCCTGCCTTCGGGCGT--TTCGGGG-CCCCGGGTGGACCAT-----------TCAA--CTCT-GCA-----TCTTTGC-GTCTGAGTA--AATGATTGAATCAAT-CAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCCTCGCTTGGTATTGGGCGCCGCGGTCC------GCCGCGCGCCTCAATGTTTCCGGCTGAGCTCTCTGTCTC--TAAGCGTTGTGGTTAAAACTATCCGCTTGCGAGAT--CGGGGGGCGTCTGGCCGTTAAACC---------ATTACTCAAAGGTTGACC------------------ Trimmatostroma_abietis ----------------------------------------------------------------------------------------------------------------------------------------CATTACT-GAGT-------GAGGGC----------------------------------------------------CTCT-GGCCCGA-------------CCTCCAACCCCATGTTA-TCTGACACTGTTGCCTCCGGGGCGACCCGGCCTGCCTTCGGGCGT--TTCGGGG-CCCCGGGTGGACCAT-----------TCAA--CTCT-GCA-----TCTTTGC-GTCTGAGTA--AATGATTGAATCAAT-CAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCCTCGCTTGGTATTGGGCGCCGCGGTCC------GCCGCGCGCCTCAATGTTTCCGGCTGAGCTCTCTGTCTC--TAAGCGTTGTGGTTAAAACTATCCGCTTGCGAGAT--CGGGGGGCGTCTGGCCGTTAAACC---------ATTACTCAAAGGTTGAC------------------- Trimmatostroma_salicis --------------------------------------------------------------------------------------------------------------------------------------ATCATTACT-GAGT-------GAGGGC----------------------------------------------------CTCT-GGCCCGA-------------CCTCCAACCCCATGTTA-TCTGACACTGTTGCCTCCGGGGCGACCCGGCCTGCCTTCGGGCGA--TTCGGGG-CCCCGGGTGGACCAT-----------TCAA--CTCT-GCA-----TCTTTGC-GTCTGAGTA--AATGATTGAATCAAT-CAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCCTCGCTTGGTATTGGGCGCCGCGGTCC------GCCGCGCGCCTCAATGTTTCCGGCTGAGCTCTCTGTCTC--TAAGCGTTGTGGTTAAAACTATCCGCTTGCGAGAT--CGGGGGGCGTCTGGCCGTTAAACC---------ATTACTCAAAGGTTGACC------------------ ; END; BEGIN SETS; CHARSET its (CHARACTERS = ITS) = 137-162 213-228 239-327 338-724; END; BEGIN CODONS; CODONPOSSET * CodonPositions (CHARACTERS = ITS) = N: 1-743; CODONPOSSET CodonPositions (CHARACTERS = ITS) = N: 1-743; END; BEGIN TREES; TITLE Tb8648; LINK TAXA = Taxa1; TRANSLATE 1 Botryosphaeria_stevensii, 2 Botryosphaeria_ribis, 3 Dichocladosporium_chlorocephalum_CBS_100405, 4 Dichocladosporium_chlorocephalum_CBS_213.73, 5 Dichocladosporium_chlorocephalum_CPC_11969, 6 Dichocladosporium_chlorocephalum_CPC_11383, 7 Trimmatostroma_salicis, 8 Trimmatostroma_abietina, 9 Trimmatostroma_abietis, 10 Teratosphaeria_microspora, 11 Readeriella_mirabilis, 12 Teratosphaeria_readeriellophora, 13 Readeriella_novaezelandiae, 14 Cercospora_beticola, 15 Cercospora_apii, 16 Mycosphaerella_punctiformis, 17 Passalora_arachidicola, 18 Passalora_fulva, 19 Mycosphaerella_aurantia, 20 Cladosporium_iridis, 21 Cladosporium_ossifragi, 22 Cladosporium_bruhnei, 23 Cladosporium_macrocarpum, 24 Cladosporium_herbarum, 25 Cladosporium_variabile, 26 Cladosporium_tenellum; TREE Fig._1 = [&R] ((((26,25,24,23,22,21,20)Cladosporium,(6,5,4,3)Dichocladosporium_chlorocephalum),((((((19,18),17),16),(15,14)),((13,12),11)),(10,(9,8,7)Trimmatostroma))),2,1); END;