#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on April 24, 2024; 1:01 GMT

TreeBASE (cc) 1994-2008

Study reference:
Freudenstein J. 1994. Character transformation and relationships in Corallorhiza
(Orchidaceae: Epidendroideae). II. Morphological variation and phylogenetic analysis.
American Journal of Botany, 81: 1458-1467.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S204]

BEGIN TAXA;
        TITLE  Taxa1;
        DIMENSIONS NTAX=11;
        TAXLABELS
            Aplectrum_hyemale
            Corallorhiza_bulbosa
            Corallorhiza_macrantha
            Corallorhiza_maculata
            Corallorhiza_mertensiana
            Corallorhiza_odontorhiza
            Corallorhiza_striata
            Corallorhiza_trifida
            Corallorhiza_williamsii
            Corallorhiza_wisteriana
            Oreorchis_patens
            ;
END;

BEGIN TAXA;
        TITLE  Taxa2;
        DIMENSIONS NTAX=8;
        TAXLABELS
            Aplectrum_hyemale
            Corallorhiza_bulbosa
            Corallorhiza_maculata
            Corallorhiza_mertensiana
            Corallorhiza_odontorhiza
            Corallorhiza_striata
            Corallorhiza_trifida
            Corallorhiza_wisteriana
            ;
END;

BEGIN CHARACTERS;
[! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M482]

	TITLE Table_1b;
	LINK TAXA = Taxa2;
	DIMENSIONS NCHAR=51;
	FORMAT DATATYPE=Standard SYMBOLS= "0 1" MISSING=? GAP= -;

MATRIX
[                                    10        20        30        40        50 ]
[                                     .         .         .         .         . ]
Aplectrum_hyemale            0000000-0000000000000000000000000000000000000000000
Corallorhiza_bulbosa         101001101100000100110110000101010101110100110010101
Corallorhiza_maculata        101001101100001000011110010101110101010100110010101
Corallorhiza_mertensiana     101001101100001000110110010101110101010100110?10111
Corallorhiza_odontorhiza     111111111100010010110111001011011101100101110101000
Corallorhiza_striata         1010100-1011100?01000000100000000010000010001000000
Corallorhiza_trifida         1010010-11000?0100100011000000010000000100100000000
Corallorhiza_wisteriana      111111111100010010110111001001001101101110110101000
;
END;

BEGIN CHARACTERS;
[! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M472]

	TITLE Table_1a;
	LINK TAXA = Taxa1;
	DIMENSIONS NCHAR=10;
	FORMAT DATATYPE=Standard SYMBOLS= "0 1" MISSING=? GAP= -;

MATRIX
Aplectrum_hyemale            0000000-00
Corallorhiza_bulbosa         1010011011
Corallorhiza_macrantha       1010011011
Corallorhiza_maculata        1010011011
Corallorhiza_mertensiana     1010011011
Corallorhiza_odontorhiza     1111111111
Corallorhiza_striata         1010100-10
Corallorhiza_trifida         1010010-11
Corallorhiza_williamsii      11111?1111
Corallorhiza_wisteriana      1111111111
Oreorchis_patens             0000010-10
;
END;

BEGIN TREES;
      TITLE Tb4934;
      LINK TAXA = Taxa1;
         TRANSLATE
            1    Aplectrum_hyemale,
            2    Oreorchis_patens,
            3    Corallorhiza_macrantha,
            4    Corallorhiza_wisteriana,
            5    Corallorhiza_maculata,
            6    Corallorhiza_mertensiana,
            7    Corallorhiza_odontorhiza,
            8    Corallorhiza_bulbosa,
            9    Corallorhiza_striata,
            10   Corallorhiza_trifida,
            11   Corallorhiza_williamsii;
      TREE Fig._10 = [&R] (1,2,(9,(10,((4,(7,11)),3,5,6,8))));
      TREE Fig._11 = [&R] (1,2,(9,(10,((4,(7,11)),(3,5,6,8)))));
      TREE Fig._13 = [&R] (1,(9,(2,(10,((4,(7,11)),3,5,6,8)))));



END;
BEGIN TREES;
      TITLE Tb4935;
      LINK TAXA = Taxa2;
         TRANSLATE
            1    Aplectrum_hyemale,
            2    Corallorhiza_maculata,
            3    Corallorhiza_mertensiana,
            4    Corallorhiza_odontorhiza,
            5    Corallorhiza_bulbosa,
            6    Corallorhiza_striata,
            7    Corallorhiza_trifida,
            8    Corallorhiza_wisteriana;
      TREE Fig._12 = [&R] (1,(6,(7,((4,8),(5,(2,3))))));



END;