#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on April 25, 2024; 0:15 GMT TreeBASE (cc) 1994-2008 Study reference: Belhoucine L., Smahi H., Berraf-tebbal A., Chouih S., Arkam M., Franceschini A., Linaldeddu B.T., & Phillips A.J. 2017. Molecular characterization and pathogenicity of Diplodia corticola and other Botryosphaeriaceae species associated with canker and dieback of Quercus suber in Algeria. Mycosphere, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S21656] BEGIN TAXA; TITLE Taxa1; DIMENSIONS NTAX=49; TAXLABELS 'Diplodia corticola BOT17_2' 'Diplodia corticola BOT18_1' 'Diplodia corticola BOT22_2' 'Diplodia corticola BOT23_1' 'Diplodia corticola BOT24_1' 'Diplodia corticola BOT25_2' 'Diplodia corticola BOT26_1' 'Diplodia corticola BOT28_1' 'Diplodia corticola BOT29_1' 'Diplodia corticola BOT2_1' 'Diplodia corticola BOT30_1' 'Diplodia corticola BOT31_2' 'Diplodia corticola BOT32_2' 'Diplodia corticola BOT33_2' 'Diplodia corticola BOT34_1' 'Diplodia corticola BOT35_2' 'Diplodia corticola BOT39_1' 'Diplodia corticola BOT3_1' 'Diplodia corticola BOT40_1' 'Diplodia corticola BOT4_1' 'Diplodia corticola BOT5_1' 'Diplodia corticola BOT6_2' 'Diplodia corticola BOT7_1' 'Diplodia corticola BOT8_1' 'Diplodia corticola BOT9_2' 'Diplodia corticola CBS112549_1' 'Diplodia corticola CBS678_88_2' 'Diplodia corticola CSC14_2_KX881741' 'Diplodia corticola CSC1_2_KX881728' 'Diplodia corticola CSC227_1_KX881732' 'Diplodia corticola CSC23_1_KX881733' 'Diplodia corticola CSC24_2_KX881735' 'Diplodia corticola CSC28_2_KX881738' 'Diplodia corticola CSC2_2_KX881737' 'Diplodia corticola CSC38_1_KX881739' 'Diplodia corticola CSC3_2' 'Diplodia corticola CSC40_1_KX881734' 'Diplodia corticola CSC47_2_KX881726' 'Diplodia corticola CSC4_2_KX881743' 'Diplodia corticola CSC50_2_KX881727' 'Diplodia corticola CSC63_2_KX881742' 'Diplodia corticola CSC65_2' 'Diplodia corticola CSC66_2' 'Diplodia corticola CSC78_1_KX881731' 'Diplodia corticola CSC7_1_KX881730' 'Diplodia corticola CSC8_2_KX881729' 'Diplodia corticola CSC9_2_KX881736' Diplodia_quercivora_BL8 Diplodia_quercivora_BL9 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M44792] TITLE Diplodia_corticola_and_other_Botryosphaeriaceae; LINK TAXA = Taxa1; DIMENSIONS NCHAR=286; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] 'Diplodia corticola BOT17_2' CATCGAGAAGTTCGAGAAGGTAAGCCGATTATTCCCACTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCCCTGGTGAGGGGCATTTTTTGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTTTGCGACCGGCGTCAGGCCGACGCGCCCCTCACTAGCGAGAAATGCCCTGACCACTCATGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola BOT18_1' CATCGAGAAGTTCGAGAAGGTAAGCCGATTGTTCTCGCTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTT-GCGACCGGCGTCAGGCCGACACGCCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola BOT22_2' CATCGAGAAGTTCGAGAAGGTAAGCCGATTATTCCCACTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCCCTGGTGAGGGGCATTTTTTGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTTTGCGACCGGCGTCAGGCCGACGCGCCCCTCACTAGCGAGAAATGCCCTGACCACTCATGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola BOT23_1' CATCGAGAAGTTCGAGAAGGTAAGCCGATTGTTCTCGCTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTT-GCGACCGGCGTCAGGCCGACACGCCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola BOT24_1' CATCGAGAAGTTCGAGAAGGTAAGCCGATTGTTCTCGCTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTT-GCGACCGGCGTCAGGCCGACACGCCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola BOT25_2' CATCGAGAAGTTCGAGAAGGTAAGCCGATTATTCCCACTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCCCTGGTGAGGGGCATTTTTTGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTTTGCGACCGGCGTCAGGCCGACGCGCCCCTCACTAGCGAGAAATGCCCTGACCACTCATGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola BOT26_1' CATCGAGAAGTTCGAGAAGGTAAGCCGATTGTTCTCGCTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTT-GCGACCGGCGTCAGGCCGACACGCCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola BOT28_1' CATCGAGAAGTTCGAGAAGGTAAGCCGATTGTTCTCGCTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTT-GCGACCGGCGTCAGGCCGACACGCCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola BOT29_1' CATCGAGAAGTTCGAGAAGGTAAGCCGATTGTTCTCGCTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTT-GCGACCGGCGTCAGGCCGACACGCCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola BOT2_1' CATCGAGAAGTTCGAGAAGGTAAGCCGATTGTTCTCGCTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTT-GCGACCGGCGTCAGGCCGACACGCCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola BOT30_1' CATCGAGAAGTTCGAGAAGGTAAGCCGATTGTTCTCGCTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTT-GCGACCGGCGTCAGGCCGACACGCCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola BOT31_2' CATCGAGAAGTTCGAGAAGGTAAGCCGATTATTCCCACTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCCCTGGTGAGGGGCATTTTTTGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTTTGCGACCGGCGTCAGGCCGACGCGCCCCTCACTAGCGAGAAATGCCCTGACCACTCATGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola BOT32_2' CATCGAGAAGTTCGAGAAGGTAAGCCGATTATTCCCACTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCCCTGGTGAGGGGCATTTTTTGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTTTGCGACCGGCGTCAGGCCGACGCGCCCCTCACTAGCGAGAAATGCCCTGACCACTCATGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola BOT33_2' CATCGAGAAGTTCGAGAAGGTAAGCCGATTATTCCCACTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCCCTGGTGAGGGGCATTTTTTGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTTTGCGACCGGCGTCAGGCCGACGCGCCCCTCACTAGCGAGAAATGCCCTGACCACTCATGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola BOT34_1' CATCGAGAAGTTCGAGAAGGTAAGCCGATTGTTCTCGCTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTT-GCGACCGGCGTCAGGCCGACACGCCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola BOT35_2' CATCGAGAAGTTCGAGAAGGTAAGCCGATTATTCCCACTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCCCTGGTGAGGGGCATTTTTTGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTTTGCGACCGGCGTCAGGCCGACGCGCCCCTCACTAGCGAGAAATGCCCTGACCACTCATGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola BOT39_1' CATCGAGAAGTTCGAGAAGGTAAGCCGATTGTTCTCGCTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTT-GCGACCGGCGTCAGGCCGACACGCCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola BOT3_1' CATCGAGAAGTTCGAGAAGGTAAGCCGATTGTTCTCGCTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTT-GCGACCGGCGTCAGGCCGACACGCCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola BOT40_1' CATCGAGAAGTTCGAGAAGGTAAGCCGATTGTTCTCGCTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTT-GCGACCGGCGTCAGGCCGACACGCCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola BOT4_1' CATCGAGAAGTTCGAGAAGGTAAGCCGATTGTTCTCGCTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTT-GCGACCGGCGTCAGGCCGACACGCCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola BOT5_1' CATCGAGAAGTTCGAGAAGGTAAGCCGATTGTTCTCGCTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTT-GCGACCGGCGTCAGGCCGACACGCCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola BOT6_2' CATCGAGAAGTTCGAGAAGGTAAGCCGATTATTCCCACTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCCCTGGTGAGGGGCATTTTTTGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTTTGCGACCGGCGTCAGGCCGACGCGCCCCTCACTAGCGAGAAATGCCCTGACCACTCATGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola BOT7_1' CATCGAGAAGTTCGAGAAGGTAAGCCGATTGTTCTCGCTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTT-GCGACCGGCGTCAGGCCGACACGCCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola BOT8_1' CATCGAGAAGTTCGAGAAGGTAAGCCGATTGTTCTCGCTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTT-GCGACCGGCGTCAGGCCGACACGCCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola BOT9_2' CATCGAGAAGTTCGAGAAGGTAAGCCGATTATTCCCACTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCCCTGGTGAGGGGCATTTTTTGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTTTGCGACCGGCGTCAGGCCGACGCGCCCCTCACTAGCGAGAAATGCCCTGACCACTCATGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola CBS112549_1' CATCGAGAAGTTCGAGAAGGTAAGCCGATTGTTCTCGCTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTT-GCGACCGGCGTCAGGCCGACACGCCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola CBS678_88_2' --------------------TAAGCCGATTATTCCCACTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCCCTGGTGAGGGGCATTTTTTGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTTTGCGACCGGCGTCAGGCCGACGCGCCCCTCACTAGCGAGAAATGCCCTGACCACTCATGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola CSC14_2_KX881741' CATCGAGAAGTTCGAGAAGGTAAGCCGATTATTCCCACTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCCCTGGTGAGGGGCATTTTTTGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTTTGCGACCGGCGTCAGGCCGACGCGCCCCTCACTAGCGAGAAATGCCCTGACCACTCATGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola CSC1_2_KX881728' CATCGAGAAGTTCGAGAAGGTAAGCCGATTATTCCCACTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCCCTGGTGAGGGGCATTTTTTGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTTTGCGACCGGCGTCAGGCCGACGCGCCCCTCACTAGCGAGAAATGCCCTGACCACTCATGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola CSC227_1_KX881732' CATCGAGAAGTTCGAGAAGGTAAGCCGATTGTTCTCGCTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTT-GCGACCGGCGTCAGGCCGACACGCCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola CSC23_1_KX881733' CATCGAGAAGTTCGAGAAGGTAAGCCGATTGTTCTCGCTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTT-GCGACCGGCGTCAGGCCGACACGCCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola CSC24_2_KX881735' CATCGAGAAGTTCGAGAAGGTAAGCCGATTATTCCCACTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCCCTGGTGAGGGGCATTTTTTGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTTTGCGACCGGCGTCAGGCCGACGCGCCCCTCACTAGCGAGAAATGCCCTGACCACTCATGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola CSC28_2_KX881738' CATCGAGAAGTTCGAGAAGGTAAGCCGATTATTCCCACTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCCCTGGTGAGGGGCATTTTTTGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTTTGCGACCGGCGTCAGGCCGACGCGCCCCTCACTAGCGAGAAATGCCCTGACCACTCATGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola CSC2_2_KX881737' CATCGAGAAGTTCGAGAAGGTAAGCCGATTATTCCCACTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCCCTGGTGAGGGGCATTTTTTGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTTTGCGACCGGCGTCAGGCCGACGCGCCCCTCACTAGCGAGAAATGCCCTGACCACTCATGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola CSC38_1_KX881739' CATCGAGAAGTTCGAGAAGGTAAGCCGATTGTTCTCGCTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTT-GCGACCGGCGTCAGGCCGACACGCCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola CSC3_2' CATCGAGAAGTTCGAGAAGGTAAGCCGATTATTCCCACTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCCCTGGTGAGGGGCATTTTTTGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTTTGCGACCGGCGTCAGGCCGACGCGCCCCTCACTAGCGAGAAATGCCCTGACCACTCATGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola CSC40_1_KX881734' CATCGAGAAGTTCGAGAAGGTAAGCCGATTGTTCTCGCTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTT-GCGACCGGCGTCAGGCCGACACGCCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola CSC47_2_KX881726' CATCGAGAAGTTCGAGAAGGTAAGCCGATTATTCCCACTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCCCTGGTGAGGGGCATTTTTTGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTTTGCGACCGGCGTCAGGCCGACGCGCCCCTCACTAGCGAGAAATGCCCTGACCACTCATGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola CSC4_2_KX881743' CATCGAGAAGTTCGAGAAGGTAAGCCGATTATTCCCACTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCCCTGGTGAGGGGCATTTTTTGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTTTGCGACCGGCGTCAGGCCGACGCGCCCCTCACTAGCGAGAAATGCCCTGACCACTCATGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola CSC50_2_KX881727' CATCGAGAAGTTCGAGAAGGTAAGCCGATTATTCCCACTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCCCTGGTGAGGGGCATTTTTTGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTTTGCGACCGGCGTCAGGCCGACGCGCCCCTCACTAGCGAGAAATGCCCTGACCACTCATGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola CSC63_2_KX881742' CATCGAGAAGTTCGAGAAGGTAAGCCGATTATTCCCACTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCCCTGGTGAGGGGCATTTTTTGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTTTGCGACCGGCGTCAGGCCGACGCGCCCCTCACTAGCGAGAAATGCCCTGACCACTCATGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola CSC65_2' CATCGAGAAGTTCGAGAAGGTAAGCCGATTATTCCCACTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCCCTGGTGAGGGGCATTTTTTGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTTTGCGACCGGCGTCAGGCCGACGCGCCCCTCACTAGCGAGAAATGCCCTGACCACTCATGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola CSC66_2' CATCGAGAAGTTCGAGAAGGTAAGCCGATTATTCCCACTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCCCTGGTGAGGGGCATTTTTTGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTTTGCGACCGGCGTCAGGCCGACGCGCCCCTCACTAGCGAGAAATGCCCTGACCACTCATGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola CSC78_1_KX881731' CATCGAGAAGTTCGAGAAGGTAAGCCGATTGTTCTCGCTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTT-GCGACCGGCGTCAGGCCGACACGCCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola CSC7_1_KX881730' CATCGAGAAGTTCGAGAAGGTAAGCCGATTGTTCTCGCTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCGCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTT-GCGACCGGCGTCAGGCCGACACGCCCCTCACTAGCGAGAAATGCCCTGACCACTCAGGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola CSC8_2_KX881729' CATCGAGAAGTTCGAGAAGGTAAGCCGATTATTCCCACTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCCCTGGTGAGGGGCATTTTTTGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTTTGCGACCGGCGTCAGGCCGACGCGCCCCTCACTAGCGAGAAATGCCCTGACCACTCATGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- 'Diplodia corticola CSC9_2_KX881736' CATCGAGAAGTTCGAGAAGGTAAGCCGATTATTCCCACTCCTGCACGTGTGCGGTGCTGCTGCGCACAGCCCGTCTTATCATCGCCCTGGTGAGGGGCATTTTTTGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTTTTGCGACCGGCGTCAGGCCGACGCGCCCCTCACTAGCGAGAAATGCCCTGACCACTCATGTGCTCTCGTATGACCACAAGCTAACGCACGCCACTACAGGAAGCCGCTGAGCTC-- Diplodia_quercivora_BL8 CATCGAGAAGTTCGAGAAGGTAAGCTGATTATTCCCGCTCCTGCACGTGTGCGGTGCTGCTGCGCACACCCCGTC---TCCTCGTCCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTT--GCGACCGGCGTCAGGCCGATGCGCCCCTCACTAGCGAGAAATGCCTTGACCACTCATGTGCTCTCGTGTGACCATAAGCTAACGCACGCCACTACAGGAAGCCGCTGAACTC-- Diplodia_quercivora_BL9 CATCGAGAAGTTCGAGAAGGTAAGCTGATTATTCCCGCTCCTGCACGTGTGCGGTGCTGCTGCGCACACCCCGTC---TCCTCGTCCTGGTGAGGGGCATTTTGCGTGGTGGGGTTTGGCCCGCGCTAAGCCTCGTCTGCGCTCGGCAAACTGGCCGCACTCGCTTTTTT--GCGACCGGCGTCAGGCCGATGCGCCCCTCACTAGCGAGAAATGCCTTGACCACTCATGTGCTCTCGTGTGACCATAAGCTAACGCACGCCACTACAGGAAGCCGCTGAACTC-- ; END; BEGIN TREES; TITLE Diplodia_corticola_and_other_Botryosphaeriaceae_MPhr; LINK TAXA = Taxa1; TRANSLATE 1 'Diplodia corticola BOT17_2', 2 'Diplodia corticola BOT18_1', 3 'Diplodia corticola BOT2_1', 4 'Diplodia corticola BOT22_2', 5 'Diplodia corticola BOT23_1', 6 'Diplodia corticola BOT24_1', 7 'Diplodia corticola BOT25_2', 8 'Diplodia corticola BOT26_1', 9 'Diplodia corticola BOT28_1', 10 'Diplodia corticola BOT29_1', 11 'Diplodia corticola BOT30_1', 12 'Diplodia corticola BOT3_1', 13 'Diplodia corticola BOT31_2', 14 'Diplodia corticola BOT32_2', 15 'Diplodia corticola BOT33_2', 16 'Diplodia corticola BOT34_1', 17 'Diplodia corticola BOT35_2', 18 'Diplodia corticola BOT39_1', 19 'Diplodia corticola BOT40_1', 20 'Diplodia corticola BOT4_1', 21 'Diplodia corticola BOT5_1', 22 'Diplodia corticola BOT6_2', 23 'Diplodia corticola BOT7_1', 24 'Diplodia corticola BOT8_1', 25 'Diplodia corticola BOT9_2', 26 'Diplodia corticola CBS112549_1', 27 'Diplodia corticola CBS678_88_2', 28 'Diplodia corticola CSC3_2', 29 'Diplodia corticola CSC65_2', 30 'Diplodia corticola CSC66_2', 31 Diplodia_quercivora_BL8, 32 Diplodia_quercivora_BL9, 33 'Diplodia corticola CSC47_2_KX881726', 34 'Diplodia corticola CSC50_2_KX881727', 35 'Diplodia corticola CSC1_2_KX881728', 36 'Diplodia corticola CSC8_2_KX881729', 37 'Diplodia corticola CSC7_1_KX881730', 38 'Diplodia corticola CSC78_1_KX881731', 39 'Diplodia corticola CSC227_1_KX881732', 40 'Diplodia corticola CSC23_1_KX881733', 41 'Diplodia corticola CSC40_1_KX881734', 42 'Diplodia corticola CSC24_2_KX881735', 43 'Diplodia corticola CSC9_2_KX881736', 44 'Diplodia corticola CSC2_2_KX881737', 45 'Diplodia corticola CSC28_2_KX881738', 46 'Diplodia corticola CSC38_1_KX881739', 47 'Diplodia corticola CSC14_2_KX881741', 48 'Diplodia corticola CSC63_2_KX881742', 49 'Diplodia corticola CSC4_2_KX881743'; TREE PAUP_1 = [&U] ((31:0.0,32:0.0):0.0,((2:0.0,3:0.0,5:0.0,6:0.0,8:0.0,9:0.0,10:0.0,11:0.0,12:0.0,16:0.0,18:0.0,19:0.0,20:0.0,21:0.0,23:0.0,24:0.0,26:0.0,37:0.0,38:0.0,39:0.0,40:0.0,41:0.0,46:0.0):14.0,(1:0.0,4:0.0,7:0.0,13:0.0,14:0.0,15:0.0,17:0.0,22:0.0,25:0.0,27:0.0,28:0.0,29:0.0,30:0.0,33:0.0,34:0.0,35:0.0,36:0.0,42:0.0,43:0.0,44:0.0,45:0.0,47:0.0,48:0.0,49:0.0):12.0):0.0) [%setBetweenBits = impossible unrooted = on ]; END;