#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on March 29, 2024; 15:03 GMT TreeBASE (cc) 1994-2008 Study reference: Sandona K., Tobia T.B., Hutchinson M.I., Natvig D.O., & Porras-alfaro A. 2019. Diversity of thermophilic fungi in corn grain. Mycologia, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S23897] BEGIN TAXA; TITLE Taxa1; DIMENSIONS NTAX=30; TAXLABELS Circinella_muscae_JN205854 Circinella_sp._JX644553 Corn_isolate_TAFCN20 Corn_isolate_TAFCg8 Corn_isolate_TAFCn11 Corn_isolate_TAFCn2 Corn_isolate_TAFCn35 Dichotomocladium_floridanum_JQ775409 Fennellomyces_linderi_FJ713096 Lichtheimia_corymbifera_FJ719398 Phycomyces_blakesleeanus_AY997071 Phycomyces_blakesleeanus_JN206308 Rhizomucor_miehei_JF412011 Rhizomucor_miehei_JN206322 Rhizomucor_miehei_JX644572 Rhizomucor_pusillus_AB369914 Rhizomucor_pusillus_EF151443 Rhizomucor_pusillus_HQ285701 Rhizomucor_pusillus_HQ285702 Rhizomucor_pusillus_HQ285716 Rhizomucor_pusillus_HQ404243 Rhizomucor_pusillus_HQ404245 Rhizomucor_pusillus_HQ404247 Rhizomucor_pusillus_JN206312 Rhizomucor_pusillus_JQ796883 Rhizomucor_pusillus_JX661046 Rhizomucor_tauricus_JN206310 Thamnostylum_piriforme_JX629062 'Thermomucor indicae-seudaticae JN206302' Uncultured_compost_fungus_AM711501 ; END; BEGIN TAXA; TITLE Taxa2; DIMENSIONS NTAX=32; TAXLABELS Aspergillus_fumigatus_AY214448 Aspergillus_fumigatus_GU566217 Aspergillus_fumigatus_KF651175 Aspergillus_niger_AY939784 Coccidioides_immitis_AB232891 Coccidioides_immitis_EF186790 Corn_isolate_TAFCg4 Corn_isolate_TAFCg5 Corn_isolate_TAFCg7 Corn_isolate_TAFCn24 Corn_isolate_TAFCn48 Corn_isolate_TAFCn8 Corn_isolate_TAFCs1 Corn_isolate_TCSB141 Corn_isolate_TCSB240 Corn_isolate_TCSB342 Corn_isolate_TCSB36 Corn_isolate_TCSB5 Eurotiales_sp._JN659413 Eurotiales_sp._JN659418 Eurotiales_sp._JN659425 Eurotiales_sp._JN659468 Eurotiales_sp._JN659471 Eurotiales_sp._JN659472 Thermoascus_aurantiacus_EU021617 Thermoascus_crustaceus_JX845310 Thermomyces_dupontii_KC342037 Thermomyces_dupontii_KF728887 Thermomyces_lanuginosus_AB085929 Thermomycesl_anuginosus_JQ639282 Uncultured_compost_fungus_AM711400 Uncultured_compost_fungus_FM177684 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M51079] TITLE Eurotiales_ITS; LINK TAXA = Taxa2; DIMENSIONS NCHAR=618; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Aspergillus_fumigatus_AY214448 TCATTA---------CCGAGTGA-GGG-----CCCTCTGGG-----------TCCAACCTCCCACCCGTGTCT-ATCGTACCT--TGTTGCTTCGGCGGGCCCGCCG---------TTTCGACGG-CCGCCGGGGA--GGCCCTGCG--------------CCCCCGGGCCCGCGCCCGCCGAAGACCC-CAACATGAACGCTG---TTCTGAAAGTATG--CAGTCTGAGTTGATT-ATCGTAATCAGTTAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCT-GCCC-TCAAGCACGGCTTGTGTGTTGGGCCCCCGTCCCCCTCTCCC--------GGGGGACGGGCCCGAAAGGCAGCGGCGGCACCGCGT--CCGGTCCTCGAGCGTATGGGGCTTTGTCACCTGCTC---TGTAGGCCCGGCCGGCGCCAGCCGAC---ACCCAACTTTA----TTT---------TTCTAAGGTTGACCTCG- Aspergillus_fumigatus_GU566217 TCATTA---------CCGAGTGA-GGG-----CCCTCTGGG-----------TCCAACCTCCCACCCGTGTCT-ATCGTACCT--TGTTGCTTCGGCGGGCCCGCCG---------TTTCGACGG-CCGCCGGGGA--GGCCCTGCG--------------CCCCCGGGCCCGCGCCCGCCGAAGACCC-CAACATGAACGCTG---TTCTGAAAGTATG--CAGTCTGAGTTGATT-ATCGTAATCAGTTAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCT-GCCC-TCAAGCACGGCTTGTGTGTTGGGCCCCCGTCCCCCTCTCCC--------GGGGGACGGGCCCGAAAGGCAGCGGCGGCACCGCGT--CCGGTCCTCGAGCGTATGGGGCTTTGTCACCTGCTC---TGTAGGCCCGGCCGGCGCCAGCCGAC---ACCCAACTTTA----TTT---------TTCTAAGGTTGACCTCG- Aspergillus_fumigatus_KF651175 TCATTA---------CCGAGTGA-GGG-----CCCTCTGGG-----------TCCAACCTCCCACCCGTGTCT-ATCGTACCT--TGTTGCTTCGGCGGGCCCGCCG---------TTTCGACGG-CCGCCGGGGA--GGCCTTGCG--------------CCCCCGGGCCCGCGCCCGCCGAAGACCC-CAACATGAACGCTG---TTCTGAAAGTATG--CAGTCTGAGTTGATT-ATCGTAATCAGTTAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCT-GCCC-TCAAGCACGGCTTGTGTGTTGGGCCCCCGTCCCCCTCTCCC--------GGGGGACGGGCCCGAAAGGCAGCGGCGGCACCGCGT--CCGGTCCTCGAGCGTATGGGGCTTTGTCACCTGCTC---TGTAGGCCCGGCCGGCGCCAGCCGAC---ACCCAACTTTA----TTT---------TTCTAAGGTTGACCTCG- Aspergillus_niger_AY939784 TCATTA---------CCGAGTGC-GGG-----TCCTTTGGG-----------CCCAACCTCCCATCCGTGTCT-ATTGTACCC--TGTTGCTTCGGCGGGCCCGCCG-----------CTTGTCGGCCGCCGGGGG--GGCGCCTCTGC------------CCCCCGGGCCCGTGCCCGCCGGAGACCC-CAACACGAACACTG----TCTGAAAGCGTG--CAGTCTGAGTTGATTGAATGCAATCAGTTAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAACTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCT-GCCC-TCAAGCCCGGCTTGTGTGTTGGGTCGCCGTCCCCCTCTCC--------GGGGGGACGGGCCCGAAAGGCAGCGGCGGCACCGCGT--CCGATCCTCGAGCGTATGGGGCTTTGTCACATGCTC---TGTAGGATTGGCCGGCGCCTGCCGACGTTTTCCAACCA------TTC---------TTTCCAGGTTGACCTCG- Coccidioides_immitis_AB232891 TCATTAAAGTGGCGTCCGGCTGC-GCACCTCCCCCGCGGGGGTTCGCGCGGTCCGTACCTCCCACCCGTGTTT-ACTGAACCA-TTGTTGCCTTGGCAGGCCTGCCG------GGCCTCCGG----CTGCCGGGGATCGCCCGCCTTGCGCGGC-------GTCCCGGGCGCGCGTCTGCCAGCGGATC---AATTGAACTCTT---ATGTGAAGATTGT--CAGTCTGAGCATCATAGCAAAAATCAAACAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTGCAAACCCTTCAAGCACGGCTTGTGTGTTGGGCCAACGTCCCCGC----------TTGTGTGGACGGGCCTGAAATGCAGTGGCGGCACCGAGTTCCTGGTGTCTGAGTGTATGGGAA---ATCACTTCATCGCTCAAAGACCCGATCGGGGCCGATCTCTTTTTTTTA----------TTT---------TATCCGGTTTGACCTCG- Coccidioides_immitis_EF186790 GCGT-----------CCGGCTGC-GCACCTCCCCCGCGGGG-GTCGCGCGGTCCGTACCTCCCACCCGTGTTT-ACTG-AACTATTGTTGCCTTGGCAGGCCTGCCG------GGCCTCCGG----CTGCCGGGGATCGCCCGCCTTGCGCGGC-------GTCCCGGGCGCGCGCCTGCCAGTGGATC---AATTGAACTCTT---ATGTGAAGATTGT--CAGTCTGAGCATCATAGCAAAAATCAAACAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTGCAAACCCTTCAAGCACGGCTTGTGTGTTGGGCTAACGTCCCCGC----------TTGTGTGGACGGGCCTGAAATGCAGTGGCGGCACCGAGTTCCTGGTGTCTGAGTGTATGGGAA---ATCACTTCATCGCTCAAAGACCCGATCGGGGCCGATCTTT------------------TTT---------TTT-----------TTA- Corn_isolate_TAFCg4 TCATTA---------CCGAGTGC-GGGAACC-CAGTCGGGT-----------CCCAATCTCCCACCCGTGTCT-ACCACACCTAGTGTTGCTTTGGCGGGCCCACTC---------CTCCGGTGTTCCGCCGGGGG--GGTCGTCCCGGGGCGCGGTGTGCCCCCGGGGCCCGTGCCCGCCAGAGGCACTCACTGTGAACGCTT---TTGTGAATGCGAGGATTGTCTGAGTGACGA-AATGCAATCGTTCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCGAACCC-TCAAGCACGGCTTGTGTGTTGGGCCGCCGTCCCCTCGTT-------TGGAGGGGACGGGCCTGAAAGGCAGCGGCGGCGTCGCGT--CCGGTCCTCGAGCGTATGGGGCTCTGTCACGCGCTCAAGGAGGGGTCCGGCCGGGGCC-ATAGCC---TCTGAAGGTCAA---TTC---------TTCCAAGGTTGACCTCG- Corn_isolate_TAFCg5 TCATTA---------CCGAGTGC-GGGAACC-CAGTCGGGT-----------CCCAATCTCCCACCCGTGTCT-ACCACACCTAGTGTTGCTTTGGCGGGCCCACTC---------CTCCGGTGTTCCGCCGGGGG--GGTCGTCCCGGGGCGCGGTGTGCCCCCGGGGCCCGTGCCCGCCAGAGGCACTCACTGTGAACGCTT---TTGTGAATGCGAGGATTGTCTGAGTGACGA-AATGCAATCGTTCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCGAACCC-TCAAGCACGGCTTGTGTGTTGGGCCGCCGTCCCCTCGTT-------TGGAGGGGACGGGCCTGAAAGGCAGCGGCGGCGTCGCGT--CCGGTCCTCGAGCGTATGGGGCTCTGTCACGCGCTCAAGGAGGGGTCCGGCCGGGGCC-ATAGCC---TCTGAAGGTCAA---TTC---------TTCCAAGGTTGACCTCG- Corn_isolate_TAFCg7 TC-TTA---------CCGAGTGC-GGGAACCCCCATCGGGT-----------CCCAATCTCCCACCCGTGTCT-ACCACACCTGGTGTTGCTTTGGCGGGCCCACTC---------CTCCGGTCT-CCGCCGGGGG--GGTCGTCCCGGGGCGCGGTTT--TGCCGGGGCGCGTGCCCGCCAGAGGCACTCACTGTGAATGCTT--GTTGTGAATGCGAGGATTGTCTGAGTGATGA-AATGCAATCGTTCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCGAACCC-TCAAGCACGGCTTGTGTGTTGGGCCGCCGTCCCCCCGTTGCAGG--GGGGGGGGACGGGCCTGAAAGGCAGCGGCGGCGTCGCGT--CCGGTCCTCGAGCGTATGGGGCTCTGTCACGCGCTCAAGGAGGGGTCCGGCCGGGGCC-ATAGCC----TCAAAGGTCAGACTTTT---------TTCCAAGGTTGACCTCG- Corn_isolate_TAFCn24 TC-TTA---------CCGAGTGC-GGGAACCCCCATCGGGT-----------CCCAATCTCCCACCCGTGTCT-ACCACACCTGGTGTTGCTTTGGCGGGCCCACTC---------CCCCGGTCT-CCGCCGGGGG--GGTCGTCCCGGGGCGCGGTTT--TGCCGGGGCCCGTGCCCGCCAGAGGCACTCACTGTGAACGCTT--GTTGTGAATGCGAGGATTGTCTGAGTGATGA-AATGCAATCGTTCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCGAACCC-TCAAGCACGGCTTGTGTGTTGGGCCGCCGTCCCCCCGTTGCA----GGGGGGGGACGGGCCTGAAAGGCAGCGGCGGCGTCGCGT--CCGGTCCTCGAGCGTATGGGGCTCTGTCACGCGCTCAAGGAGGGGTCCGGCCGGGGCC-ATAGCC----TCAAAGGTCAGACTTTT---------TTCCAAGGTTGACCTCG- Corn_isolate_TAFCn48 TC-TTA---------CCGAGTGC-GGGAACCCCCATCGGGT-----------CCCAATCTCCCACCCGTGTCT-ACTACACCTGGTGTTGCTTTGGCGGGCCCACTC---------CCCCGGTCT-CCGCCGGGGG--GGTCGTCCCGGGGCGCGGTTT--TGCCGGGGCCCGTGCCCGCCAGAGGCACTCACTGTGAACGCTT--GTTGTGAATGCGAGGATTGTCTGAGTGATGA-AATGCAATCGTTCAAAACTTTCAACAATGGATCTCTTGGTTCCCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCCGTGAATCATCGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Corn_isolate_TAFCn8 TCATTA---------CCGAGTGC-GGGAACC-CAGTCGGGT-----------CCCAATCTCCCACCCGTGTCT-ACCACACCTAGTGTTGCTTTGGCGGGCCCACTC---------CTCCGGTGTTCCGCCGGGGG--GGTCGTCCCGGGGCGCGGTGTGCCCCCGGGGCCCGTGCCCGCCAGAGGCACTCACTGTGAACGCTT---TTGTGAATGCGAGGATTGTCTGAGTGACGA-AATGCAATCGTTCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCGAACCC-TCAAGCACGGCTTGTGTGTTGGGCCGCCGTCCCCTCGTT-------TGGAGGGGACGGGCCTGAAAGGCAGCGGCGGCGTCGCGT--CCGGTCCTCGAGCGTATGGGGCTCTGTCACGCGCTCAAGGAGGGGTCCGGCCGGGGCC-ATAGCC---TCTGAAGGTCAA---TTC---------TTCCAAGGTTGACCTCG- Corn_isolate_TAFCs1 TC-TTA---------CCGAGTGC-GGGAACCCCCATCGGGT-----------CCCAATCTCCCACCCGTGTCT-ACCACACCTGGTGTTGCTTTGGCGGGCCCACTC---------CCCCGGTCT-CCGCCGGGGG--GGTCGTCCCGGGGCGCGGTTT--TGCCGGGGCCCGTGCCCGCCAGAGGCACTCACTGTGAACGCTT--GTTGTGAATGCGAGGATTGTCTGAGTGATGA-AATGCAATCGTTCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCGAACCC-TCAAGCACGGCTTGTGTGTTGGGCCGCCGTCCCCCCGTTGCA----GGGGGGGGACGGGCCTGAAAGGCAGCGGCGGCGTCGCGT--CCGGTCCTCGAGCGTATGGGGCTCTGTCACGCGCTCAAGGAGGGGTCCGGCCGGGGCC-ATAGCC----TCAAAGGTCAGACTTTT---------TTCCAAGGTTGACCTCG- Corn_isolate_TCSB141 TCATTA---------CCGAGTGC-GGGAACC-CAGTCGGGT-----------CCCAATCTCCCACCCGTGTCT-ACCACACCTAGTGTTGCTTTGGCGGGCCCACTC---------CTCCGGTGTTCCGCCGGGGG--GGTCGTCCCGGGGCGCGGTGTGCCCCCGGGGCCCGTGCCCGCCAGAGGCACTCACTGTGAACGCTT---TTGTGAATGCGAGGATTGTCTGAGTGACGA-AATGCAATCGTTCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCGAACCC-TCAAGCACGGCTTGTGTGTTGGGCCGCCGTCCCCTCGTT-------TGGAGGGGACGGGCCTGAAAGGCAGCGGCGGCGTCGCGT--CCGGTCCTCGAGCGTATGGGGCTCTGTCACGCGCTCAAGGAGGGGTCCGGCCGGGGCC-ATAGCC---TCTGAAGGTCAA---TTC---------TTCCAAGGTTGACCTCG- Corn_isolate_TCSB240 TCATTA---------CCGAGTGA-GGG-----CCCTCTGGG-----------TCCAACCTCCCACCCGTGTCT-ATCGTACCT--TGTTGCTTCGGCGGGCCCGCCG---------TTTCGACGG-CCGCCGGGGA--GGCCCTGCG--------------CCCCCGGGCCCGCGCCCGCCGAAGACCC-CAACATGAACGCTG---TTCTGAAAGTATG--CAGTCTGAGTTGATT-ATCGTAATCAGTTAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCT-GCCC-TCAAGCACGGCTTGTGTGTTGGGCCCCCGTCCCCCTCTCCC--------GGGGGACGGGCCCGAAAGGCAGCGGCGGCACCGCGT--CCGGTCCTCGAGCGTATGGGGCTTTGTCACCTGCTC---TGTAGGCCCGGCCGGCGCCAGCCGAC---ACCCAACTTTA----TTT---------TTCTAAGGTTGACCTCG- Corn_isolate_TCSB342 TCATTA---------CCGAGTGA-GGG-----CCCTCTGGG-----------TCCAACCTCCCACCCGTGTCT-ATCGTACCT--TGTTGCTTCGGCGGGCCCGCCG---------TTTCGACGG-CCGCCGGGGA--GGCCTTGCG--------------CCCCCGGGCCCGCGCCCGCCGAAGACCC-CAACATGAACGCTG---TTCTGAAAGTATG--CAGTCTGAGTTGATT-ATCGTAATCAGTTAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCT-GCCC-TCAAGCACGGCTTGTGTGTTGGGCCCCCGTCCCCCTCTCCC--------GGGGGACGGGCCCGAAAGGCAGCGGCGGCACCGCGT--CCGGTCCTCGAGCGTATGGGGCTTTGTCACCTGCTC---TGTAGGCCCGGCCGGCGCCAGCCGAC---ACCCAACTTTA----TTT---------TTCTAAGGTTGACCTCG- Corn_isolate_TCSB36 TCATTA---------CCGAGTGC-GGGT----CCTTCGGGG-----------CCCAACCTCCCACCCGTGTCT-ACCGTACC--GTGTTGCTTCGGCGGGCCCGCCG---------CAAGG-----CCGCCGGGGGGCGT---------------------CCCCCCGGCCCGTGCCCGCCGGAGACCC----TGTGAACGCTG-ATCTGTGAAGGCGTG--TCGTCTGAGTCGCGTGA--GAAATCGTG-AAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCT-GCCC-TCAAGCACGGCTTGTGTGTTGGGCCGCCGTCCCCGCCCTCC-----GCGGGGGGACGGGCCCGAAAGGCAGCGGCGGCGCCGCGT--CCGGTCCTCGAGCGTATGGGGCTCTGTCACCCGCTC---TGCAGGCCCGGCCGGCGCCCGCCG----------AGTCAACCACTTC---------TTTCCAGGTTGACCTCG- Corn_isolate_TCSB5 TCATTA---------CCGAGTGC-GGGAACC-CAGTCGGGT-----------CCCAATCTCCCACCCGTGTCT-ACCACACCTAGTGTTGCTTTGGCGGGCCCACTC---------CTCCGGTGTTCCGCCGGGGG--GGTCGTCCCGGGGCGCGGTGTGCCCCCGGGGCCCGTGCCCGCCAGAGGCACTCACTGTGAACGCTT---TTGTGAATGCGAGGATTGTCTGAGTGACGA-AATGCAATCGTTCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCGAACCC-TCAAGCACGGCTTGTGTGTTGGGCCGCCGTCCCCTCGTT-------TGGAGGGGACGGGCCTGAAAGGCAGCGGCGGCGTCGCGT--CCGGTCCTCGAGCGTATGGGGCTCTGTCACGCGCTCAAGGAGGGGTCCGGCCGGGGCC-ATAGCC---TCTGAAGGTCAA---TTC---------TTCCAAGGTTGACCTCG- Eurotiales_sp._JN659413 TCATTA---------CCGAGTGCGGGGAACCCCCATCGGGT-----------CCCAATCTCCCACCCGTGTCT-ACCACACCTGGTGTTGCTTTGGCGGGCCCACTC---------CCCCGGTCT-CCGCCGGGGG--GGTCGTCCCGGGGCGCGGTTT--TGCCGGGGCCCGTGCCCGCCAGAGGCACTCACTGTGAACGCTT--GTTGTGAATGCGAGGATTGTCTGAGTGATGA-AATGCAATCGTTCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCGAACCC-TCAAGCACGGCTTGTGTGTTGGGCCGCCGTCCCCCCGTTGCA----GGGGGGGGACGGGCCTGAAAGGCAGCGGCGGCGTCGCGT--CCGGTCCTCGAGCGTATGGGGCTCTGTCACGCGCTCAAGGAGGGGTCCGGCCGGGGCC-ATAGCC----TCAAAGGTCAGACTTTT---------TTCCAAGGTTGACCTCG- Eurotiales_sp._JN659418 TCATTA---------CCGAGTGC-GGGAACCCCCATCGGGT-----------CCCAATCTCCCA??CGTGTCT-ACTACACCTGGTGTTGCTTTGGCGGGCCCACTC---------CCCCGGTCT-CCGCCGGGGG--GGTCGTCCCGGGGCGCGGTTT--TGCCGGGGCCCGTGCCCGCCAGAGGCACTCACTGTGAACGCTT--GTTGTGAATGCGAGGATTGTCTGAGTGATGA-AATGCAATCGTTCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCGAACCC-TCAAGCACGGCTTGTGTGTTGGGCCGCCGTCCCCCCGTTGCA----GGGGGGGGACGGGCCTGAAAGGCAGCGGCGGCGTCGCGT--CCGGTCCTCGAGCGTATGGGGCTCTGTCACGCGCTCAAGGAGGGGTCCGGCCGGGGCC-ATAGCC----TCAAAGGTCAGACTTTT---------TTCCAAGGTTGACCTCG- Eurotiales_sp._JN659425 TCATTA---------CCGAGTGC-GGGAACC-CAGTCGGGT-----------CCCAATCTCCCACCCGTGTCT-ACCACACCTAGTGTTGCTTTGGCGGGCCCACTC---------CTCCGGTGTTCCGCCGGGGG--GGTCGTCCCGGGGCGCGGTGTGCCCCCGGGGCCCGTGCCCGCCAGAGGCACTCACTGTGAACGCTT---TTGTGAATGCGAGGATTGTCTGAGTGACGA-AATGCAATCGTTCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCGAACCC-TCAAGCACGGCTTGTGTGTTGGGCCGCCGTCCCCTCGTT-------TGGAGGGGACGGGCCTGAAAGGCAGCGGCGGCGTCGCGT--CCGGTCCTCGAGCGTATGGGGCTCTGTCACGCGCTCAAGGAGGGGTCCGGCCGGGGCC-ATAGCC---TCTGAAGGTCAA---TTC---------TTCCAAGGTTGACCTCG- Eurotiales_sp._JN659468 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACTCACTGTGAATGCTT--GTTGTGAATGCGAGGATTGTCTGAGTGATGA-AATGCAATCGTTCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGT-TTCCGGGGGGCATGCCTGTCCGAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Eurotiales_sp._JN659471 TCATTA---------CCGAGTGC-GGGT----CCTCCGGGG-----------CCCAACCTCCCACCCGTGTGT-ACCGTACCC--TGTTGCTTCGGCGGGCCCGCCG---------CAAGG-----CCGCCGGGGG--GCGTGTCCCG-------------CCCCCGGGCCCGCGCCCGCCGGAGACCC----TTCGAACGCTGAGCTTTTGAAGGCGTG--CCGTCTGAGTCGCGT-GA-GAAATCGTG-AAAACTTTCAACAACGG-TCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCT-GCCC-TCAAGCCCGGCTTGTGTGTTGGGCCGCCGTCCCCGCCCGCC-----GCGGGGGGACGGGCCCG---GGCAGCGGCGGCGCCGCGT--CCGGTCCTCGAGCGTATGG---------------------------------------------------------------------------------------------- Eurotiales_sp._JN659472 -----------------------------------------------------------------------------------------------------------------------------------GGGGA--GGCCTTGCG--------------CCCCCGGGCCCGCGCCCGCCGAAGACCC-CAACA-GAACGCTG---TTCTGAAAGTATG--CAGTCTGAGTTGATT-ATCGTAATCAGTTAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGCAGC-----GCCC-TCAAGCACGGCTTGTGTGTTGGGCCCCCGTCCCCCTCTCCC--------GGGGGACGGGCCCGAAAGGCAGCGGCGGCACCGCGT--CCGGTCCTCGAGCGTATGGGGCTTTGTCACCTGCTC---TGTAGGCCCGGCCGGCGCCAGCCGAC---ACCCAACTTTA----TTT---------TTCTAAGGTTGACCTCG- Thermoascus_aurantiacus_EU021617 TCATTA---------CCGAGTGC-GGGT----CCTCCGGGG-----------CCCAACCTCCCACCCGTGTGT-ACCGTACCC--TGTTGCTTCGGCGGGCCCGCCG---------CAAGG-----CCGCCGGGGG--GCGTGTCCCG-------------CCCCCGGGCCCGCGCCCGCCGGAGGCCC----TTCGAACGCTGAGCTTTTGAAGGCGTG--CCGTCTGAGTCGCGT-GA-GAAATCGTG-AAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCT-GCCC-TCAAGCCCGGCTTGTGTGTTGGGCCGCCGTCCCCGCCCGCC-----GCGGGGGGACGGGCCCGAAAGGCAGCGGCGGCGCCGCGT--CCGGTCCTCGAGCGTATGGGGCTTCGTCACCCGCTC--TTGCAGGCCCGGCCGGAGCC--TCAGCCCGACCCCGCGTCAACATCTT------------CCAGGTTGACCTCG- Thermoascus_crustaceus_JX845310 TCATTA---------CCGAGTGC-GGGT----CCTTCGGGG-----------CCCAACCTCCCACCCGTGTCT-ACCGTACC--GTGTTGCTTCGGCGGGCCCGCCG---------CAAGG-----CCGCCGGGGGGCGT---------------------CCCCCCGGCCCGTGCCCGCCGGAGACCC----TGTGAACGCTG-ATCTGTGAAGGCGTG--TCGTCTGAGTCGCGTGA--GAAATCGTG-AAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCT-GCCC-TCAAGCACGGCTTGTGTGTTGGGCCGCCGTCCCCGCCCTCC-----GCGGGGGGACGGGCCCGAAAGGCAGCGGCGGCGCCGCGT--CCGGTCCTCGAGCGTATGGGGCTCTGTCACCCGCTC---TGCAGGCCCGGCCGGCGCCCGCCG----------AGTCAACCACTTC---------TTTCCAGGTTGACCTCG- Thermomyces_dupontii_KC342037 --------------------------------CCATCGGG------------TCCAATCTCCCACCCGTGTCT-ACCACACCTGGTGTTGCTTTGGCGGGCCCACTC---------CTCCGGTCT-CCGCCGGGGG--GGTCGTCCCGGGGCGCGGTTT--TGCCGGGGCGCGTGCCCGCCAGAGGCACTCACTGTGAATGCTT--GTTGTGAATGCGAGGATTGTCTGAGTGATGA-AATGCAATCGTTCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCGAACCC-TCAAGCACGGCTTGTGTGTTGGGCCGCCGTCCCCCCGTTGCAGGGGGGGGGGGGACGGGCCTGAAAGGCAGCGGCGGCGTCGCGT--CCGGTCCTCGAGCGTATGGGGCTCTGTCACGCGCTCAAGGAGGGGTCCGGCCGGGGCC-ATAGCC----TCAAAGGTCAGACTTT----------TTCCAAGG-TGACCTCG- Thermomyces_dupontii_KF728887 TCATTA---------CCGAGTGC-GGGAACCCCCATCGGGT-----------CCCAATCTCCCACCCGTGTCT-ACCACACCTGGTGTTGCTTTGGCGGGCCCACTC---------CCCCGGTCT-CCGCCGGGGG--GGTCGTCCCGGGGCGCGGTTT--TGCCGGGGCCCGTGCCCGCCAGAGGCACTCACTGTGAACGCTT--GTTGTGAATGCGAGGATTGTCTGAGTGATGA-AATGCAATCGTTCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCGAACCC-TCAAGCACGGCTTGTGTGTTGGGCCGCCGTCCCCCCGTTGCA----GGGGGGGGACGGGCCTGAAAGGCAGCGGCGGCGTCGCGT--CCGGTCCTCGAGCGTATGGGGCTCTGTCACGCGCTCAAGGAGGGGTCCGGCCGGGGCC-ATAGCC----TCAAAGGTCAGACTTTT---------TTCCAAGGTTGACCTCG- Thermomyces_lanuginosus_AB085929 TCATTA---------CCGAGTGC-GGGAACC-CAGTCGGGT-----------CCCAATCTCCCACCCGTGTCT-ACCACACCTAGTGTTGCTTTGGCGGGCCCACTC---------CTCCGGTGTTCCGCCGGGGG--GGTCGTCCCGGGGCGCGGTGTGCCCCCGGGGCCCGTGCCCGCCAGAGGCACTCACTGTGAACGCTT---TTGTGAATGCGAGGATTGTCTGAGTGACGA-AATGCAATCGTTCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCGAACCC-TCAAGCACGGCTTGTGTGTTGGGCCGCCGTCCCCTCGTT-------TGGAGGGGACGGGCCTGAAAGGCAGCGGCGGCGTCGCGT--CCGGTCCTCGAGCGTATGGGGCTCTGTCACGCGCTCAAGGAGGGGTCCGGCCGGGGCC-ATAGCC---TCTGAAGGTCAA---TTC---------TTCCAAGGTTGACCTCG- Thermomycesl_anuginosus_JQ639282 TCATTA---------CCGAGTGC-GGGAACC-CAGTCGGGT-----------CCCAATCTCCCACCCGTGTCT-ACCACACCTAGTGTTGCTTTGGCGGGCCCACTC---------CTCCGGTGTTCCGCCGGGGG--GGTCGTCCCGGGGCGCGGTGTGCCCCCGGGGCCCGTGCCCGCCAGAGGCACTCACTGTGAACGCTT---TTGTGAATGCGAGGATTGTCTGAGTGACGA-AATGCAATCGTTCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCGAACCC-TCAAGCACGGCTTGTGTGTTGGGCCGCCGTCCCCTCGTT-------TGGAGGGGACGGGCCTGAAAGGCAGCGGCGGCGTCGCGT--CCGGTCCTCGAGCGTATGGGGCTCTGTCACGCGCTCAAGGAGGGGTCCGGCCGGGGCC-ATAGCC---TCTGAAGGTCAA---TTC---------TTCCAAGGTTGACCTCG- Uncultured_compost_fungus_AM711400 TCATTA---------CCGAGTGC-GGGAACCCCCATCGGGT-----------CCCAATCTCCCACCCGTGTCT-ACCACACCTGGTGTTGCTTTGGCGGGCCCACTC---------CTCCGGTCT-CCGCCGGGGG--GGTCGTCCCGGGGCGCGGTTT--TGCCGGGGCGCGTGCCCGCCAGAGGCACTCACTGTGAATGCTT--GTTGTGAATGCGAGGATTGTCTGAGTGATGA-AATGCAATCGTTCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCGAACCC-TCAAGCACGGCTTGTGTGTTGGGCCGCCGTCCCCCCGTTGCAGGGGGGGGGGGGACGGGCCTGAAAGGCAGCGGCGGCGTCGCGT--CCGGTCCTCGAGCGTATGGGGCTCTGTCACGCGCTCAAGGAGGGGTCCGGCCGGGGGCCATAGCC----TCAAAGGTCAGACTTTT---------TTCCAAGGTTGACCTCG- Uncultured_compost_fungus_FM177684 TCATTA---------CCGAGTGC-GGGAACCCCCATCGGGT-----------CCCAATCTCCCACCCGTGTCT-ACCACACCTGGTGTTGCTTTGGCGGGCCCACTC---------CTCCGGTCT-CCGCCGGGGG--GGTCGTCCCGGGGCGCGGTTT--TGCCGGGGCCCGTGCCCGCCAGAGGCACTCACTGTGAACGCTT--GTTGTGAATGCGAGGATTGTCTGAGTGATGA-AATGCAATCGTTCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCGAACCC-TCAAGCACGGCTTGTGTGTTGGGCCGCCGTCCCCCCGTTGCAGGGGGGGGGGGGACGGGCCTGAAAGGCAGCGGCGGCGTCGCGT--CCGGTCCTCGAGCGTATGGGGCTCTGTCACGCGCTCAAGGAGGGGTCCGGCCGGGGCC-ATAGCC----TCAAAGGTCAGACTTTT---------TTCCAAGGTTGACCTCG- ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M51078] TITLE Mucorales_ITS; LINK TAXA = Taxa1; DIMENSIONS NCHAR=671; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Circinella_muscae_JN205854 ACCGCAAAGGTTCTTCTGAACCAACCTTATGTTTATTAAACT------------CTGAACTTATAACAA---AAGGGTGTTTTGGTCTT----AATTGACTAG----CCTTTTTATTTAATGTGGTCTTGATTGACTACTAAAACAACTTTTAGCAATGGATCTCTTGGTTCTCGCATCGATGAAGAGCGTAGCAAATTGCGATAATTAGTGCGAATTGCAGACTTTGTGAATCATCGAGTTCTTGAACGCACCTTGCACCTAGTGGTTTATTCTACTAGGTACGGTTGTTTCAGTATC---ACAAAAC------TCAACAACCTATTCATTTGTTTGAATACGTGTTGGAGATGAGTCTTT--TGGTC-----------------------TTCTCGTTAAGACTAAATGACTTGAAATCTATTT----------------------ACCAAA--AATCTTGG------ATTTGCCAAGAGACTGGATCGTAATTGGT-TTTAAATC-----------------TGGTCTTGATAATTCGAACTTTTGGTGTAAAA----------CAA{CT}CCAAACCAAAAC------------------------------------------------CGTGATCTGAAATCAACTGAGACTACCCGCTG-AACTTA- Circinella_sp._JX644553 ACCGCAAAGGTTCTTTTGAACCAACTTTATATATATGAAATT------------CTGATTCTATAACAA--AAAGGACGTATTTGGTCTT---AATTGACTTGGTCTCTTTTATACTTAACGTGGTCTTGATTGACTACTAAAACAACTTTTAGCAATGGATCTCTTGGTTCTCGCATCGATGAAGAGCGTAGCAAATTGCGATAATTAGTGCGAATTGCAGACTTTGCGAATCATCGAGTTCTTGAACGCACCTTGCACCTAATGGTTTATTCTATTAGGTACGGTTGTTTCAGTATC---ACAAAAC------TCAACAACCTATTCATTTGTTTGAATACGAGTTGGAGATGAGACTTT--TGGAT---------------------CTACTAGCTTAGGACCAAATGACTTGAAATCTATCT----------------------ACCAAA--AATCTTGG------GTTTGCCAAGAGACTGGATCGTAATTTGGTTTAAAATC-----------------TGGTCTTGATAACTTGAACTTTTGGTATAAAA---------CAAAGTTAAACCAAAAC------------------------------------------------CGTGATCTGAAATCAACTGAGACTACCCGCTG-AACTTA- Corn_isolate_TAFCN20 ATTGCTCCAGATCTCTCGACCTTTTATTTTACATATTTGATTGACTGTTG-----------TTTAACAA--ATTGAAAGTTTTGGATCAG---AAATGATTCAAGA-----------CGATAAAATTTC-----------AAAACAACTTTAAGCAATGGATCACTTGGTTCTCGCATCGATGAAGAGCGTAGCAAATTGCGAAAAGTAATGCGATCTGCAGCCTTTGCGAATCATCGAATTCTCGAACGCACCTTGCACCCTTTGG-TTCATCCATTGGGTACGTCTAGTTCAGTATCTTTATTAACC-----CCTAAAGGTTTATTTTTTGATAAATCTT-----TGGATTTGCGGTGCTGATGGAT----------------------TTTCATCC---GTTCAAGCTACCCGAA---CAATTTGTATGTTGTTG----------ACCCTT--GATATTTC----------CTTGAGGGTTTGCATTGGTA------TCTAATTTT----------------TTACCAGTGTGCTTCGAGATGATCAAGTATAA-----------AGGTCAATCAACCACAA----------------------------------------------ATAAATTTCAACT--------------------------- Corn_isolate_TAFCg8 ATTGCTCCAGATCTCTCGACCTTTTATTTTACATATTTGATTGACTGGTG-----------TTTAACAA--ATTGAAAGTTTTGGATCAA---AAATGATTCAAGA-----------CGATAAAATTTC-----------AAAACAACTTTAAGCAATGGATCACTTGGTTCTCGCATCGATGAAGA?CGTAACAAATTGCGAAAAGTAATGCGATCTGCAGCCTTTGCGAATCATCGAATTCTCGAACGCACCTTGCACCCTTTGG-TTCATCCATTGGGTACGTCTAGTTCAGTATCTTTATTAACC-----CCTAAAGGTTTATTTTTTGATAAATCTT-----TGGATTTGCGGTGCTGATGGAT----------------------TTTCATCC---GTTCAAGCTACCCGAA---CAATTTGTATGTTGTTG----------ACCCTT--GATATTTC----------CTTGAGGGTTTGCATTGGTA------TCTAATTTT----------------TTACCAGTGTGCTTCGAGATGATCAAGTATAA-----------AGGTCAATCAACCACAAATAAATTTC------------------------AACT---------ATGGATCTGAACTTAAATGGGATTACCCGCTG-AACTTA- Corn_isolate_TAFCn11 ATTGCTCCAGATCTCTCGACCTTTTATTTTACATATTTGATTGACTGTTG-----------TTTAACAA--ATTGAAAGTTTTGGATCAG---AAATGATTCAAGA-----------CGATAAAATTTC-----------AAAACAACTTTAAGCAATGGATCACTTGGTTCTCGCATCGATGAAGAGCGTAGCAAATTGCGAAAAGTAATGCGATCTGCAGCCTTTGCGAATCATCGAATTCTCGAACGCACCTTGCACCCTTTGG-TTCATCCATTGGGTACGTCTAGTTCAGTATCTTTATTAACC-----CCTAAAGGTTTATTTTTTGATAAATCTT-----TGGATTTGCGGTGCTGATGGAT----------------------TTTCATCC---GTTCAAGCTACCCGAA---CAATTTGTATGTTGTTG----------ACCCTT--GATATTTC----------CTTGAGGGTTTGCATTGGTA------TCTAATTTT----------------TTACCAGTGTGCTTCGAGATGATCAAGTATAA-----------AGGTCAATCAACCACAAATTC------------------------------------------TTTCAACTAG------------------------------ Corn_isolate_TAFCn2 ATTGCTCCAGATCTCTCGACCTTTTATTTTACATATTTGATTGACTGTTG-----------TTTAACAA--ATTGAAAGTTTTGGATCAG---AAATGATTCAAGA-----------CGATAAAATTTC-----------AAAACAACTTTAAGCAATGGATCACTTGGTTCTCGCATCGATGAAGAGCGTAGCAAATTGCGAAAAGTAATGCGATCTGCAGCCTTTGCGAATCATCGAATTCTCGAACGCACCTTGCACCCTTTGG-TTCATCCATTGGGTACGTCTAGTTCAGTATCTTTATTAACC-----CCTAAAGGTTTATTTTTTGATAAATCTT-----TGGATTTGCGGTGCTGATGGAT----------------------TTTCATCC---GTTCAAGCTACCCGAA---CAATTTGTATGTTGTTG----------ACCCTT--GATATTTC----------CTTGAGGGTTTGCATTGGTA------TCTAATTTT----------------TTACCAGTGTGCTTCGAGATGATCAAGTATAA-----------AGGTCAATCAACCACAATTCTTTCAA-------------------------------------CTAGGAGCGAACTTAGATGGGATACC-------------- Corn_isolate_TAFCn35 ATTGCTCCAGATCTCTCGACCTTTTATTTTACATATTTGATTGACTGGTG-----------TTTAACAA--ATTGAAAGTTTTGGATCAA---AAATGATTCAAGA-----------CGATAAAATTTC-----------AAAACAACTTTAAGCAATGGATCACTTGGTTCTCGCATCGATGAAGAACGTA?CAAATTGCGAAAAGTAATGCGATCTGCAGCCTTTGCGAATCATCGAATTCTCGAACGCACCTTGCACCCTTTGG-TTCATCCATTGGGTACGTCTAGTTCAGTATCTTTATTAACC-----CCTAAAGGTTTATTTTTTGATAAATCTT-----TGGATTTGCGGTGCTGATGGAT----------------------TTTCATCC---GTTCAAGCTACCCGAA---CAATTTGTATGTTGTTG----------ACCCTT--GATATTTC----------CTTGAGGGTTTGCATTGGTA------TCTAATTTT----------------TTACCAGTGTGCTTCGAGATGATCAAGTATAA-----------AGGTCAATCAACCACAAATAAATTTC------------------------AACT---------ATGGATCTGAACTTAGATGGGATTACCCGCTG-AACTTA- Dichotomocladium_floridanum_JQ775409 ATCTCGACTGGTCTC------------TTTGTTCGTTAAATGCTTTGGACTTGAGCAACCCAATATAAA-----TAAGATTGATGTATGATTGAAATAATTCAAACTTGATAGTCTGTAATGGATTGTC---------TAAAAACAACTCTTAGCAATGGATCTCTTGGTTCTCGCATCGATGAAGAGCGTAGCAAAGTGCGATAATTAGTGCGACTTGCATACATTGCGAATCATCGAGTTCTTGAACGCATCTTGCACCTGGAGG-TTCTTCCTCCAGGTATGGTTGTTTCAGTATC--CACAAAAC-------CCCAAACGCGACTTTTAGGAGTCG-------TGGAAATGGGCATCCTAGGGAG-------------------------TATTC-----TCTAATGCCTTAAAACCTAACG----------------------ATCAGTCCGTTGTATT--------TGATGTATAACTTGGTCTCCCA------TTTCAGTCGTTGAGCCTTAGGGCACTTGGGTTTACAACCTTGGGTTTCAACGCGGAAGACTAGGGTCGAGTGCGA--------------------------------------------------------CTTGATCTGAAA--GAATGAG------------------- Fennellomyces_linderi_FJ713096 ACCGCAAAGGTTCTTCTGAACCAACTTTATGTTTATTAAACT------------CTGAACTTATAACAA-----AGGGGTTTTGGTCTT----AATTGACCTA----CCTTTTTATTTAATGTGGTCTTGATTGACTACTAAAACAACTTTTAGCAATGGATCTCTTGGTTCTCGCATCGATGAAGAGCGTAGCAAATTGCGATAATTAGTGCGAATTGCAGACTTTGTGAATCATCGAGTTCTTGAACGCACCTTGCACCTAGTGGTTTATTCTACTAGGTACGGTTGTTTCAGTATC---ACAAAAC------TCAACAACCTATTCATTTGTTTGAATACGTGTTGGAGATGAGTCTTT--TGGTC-----------------------TTCTCGTTAAGACTAAATGACTTGAAATCTATTT----------------------ACCAAA--AATCTTGG------ATTTGCCAAGAGACTGGATCGTAATTGGT-TTTAAATC-----------------TGGTCTTGATAATTCGAACTTTTGGTATAAAA----------CAATCCAAACCAAAAC------------------------------------------------CGTGATCTGAAATCAACTGAGACTACCCGCTG-AACTT-- Lichtheimia_corymbifera_FJ719398 ACCCCAAAGGTTTTTTC-------TACTATGTCTATGAATTG------------------ATGTATGAA--AAAAAAGTTATTTG----------TTAACTTGAAGGCTTCTGTA---AAAAGAGTCTT---------TAAAAACAACTCTTGGCAATGGATCTCTTGGTTCTCGCATCGATGAAGAGCGTAGCAAAGTGCGATAATTATTGCGACTTGCATTCATAGTGAATCATCGAGTTCTTGAACGCATCTTGCGCCTAGTAG-TCAATCTACTAGGCACAGTTGTTTCAGTATCTGCATCCACC-------AATCAACTTAACCTTTTGTGTTGAGT-----TGGAACTGGGCTTCTAGTTGAT-------------------GGCATTTAGTT---GCTGTCATGGCCTTAAATCAATGTCCTAGGTGTTAGAACATCTAACACCGGATGGAAACTTTAGAGCGCTTTAAGAGCAGCTTGGTTAGTGAG-----TTCAATAATTCCAAGCATTAAGTCTTTTAATGAACTAGCTTTTCTATCTATGGGACACTACTTGGAGAAATCCAAGTAACCTTTAAACTCCAT--------------------------------------TTAGATCTGAAATCAACTGAGACCACCCGCTG-AACTTA- Phycomyces_blakesleeanus_AY997071 ATCCCTATAGG------AAAACAAAATCTTACTGAAGAACTG--------------AATCTAGTTGGAA--AACTAAA---------------AGTTAACATGACC-------------GCAAGGTTAT-----------AAAACAACTTTCAGCAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGTAGCAAACTGCGATACTTAATGTGAATTGCAAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCTCACTGG--TATTCCAGTGAGCACGCCTGTTTCAGCATC---ACAAAACAACCACAAAACAATTTGTTTATTCGAATTTGTTT----TGATTATGGATAGATCATGGTA-----------------------TTTATAC---CGTTGAATCATCTTAAGCAAAGCT----------------------TGTAAAAGAATCTTGT-----CGGTTATCAACAGATCAAACTTTA-------TAAAAATCACCTGGCTATGG-----TTGCCGGTGCTAGTTTATCTGGGCAGACATAAGAACGGTTCCCAAGTAAAAAGTAGTTTGGCTCATTTA-------------------------------------TTTAAGCCAAATTTCTTTAATACAA--------------- Phycomyces_blakesleeanus_JN206308 ATCCCTATAGG------AAAACAAAATCTTACTGAAGAACTG--------------AATCTAGTTGGAA--AACTAAA---------------AGTTAACATGACC-------------GCAAGGTTAT-----------AAAACAACTTTCAGCAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGTAGCAAACTGCGATACTTAATGTGAATTGCAAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCTCACTGG--TATTCCAGTGAGCACGCCTGTTTCAGCATC---ACAAAACAACCACAAAACAATTTGTTTATTCGAATTTGTTT----TGATTATGGATAGATCATGGTA-----------------------TTTATAC---CGTTGAATCATCTTAAGCAAAGCT----------------------TGTAAAAGAATCTTGT-----CGGTTATCAACAGATCAAACTTTA-------TAAAAATCACCTGGCTATGG-----TTGCCGGTGCTAGTTTATCTGGGCAGACATAAGAACGGTTCCCAAGTAAAAAGTAGTTTGGCTCATTTATTTAAGCCAAATTTCTTTAATACAAACCATTTTAAAATTGGATCTGAAATCAGGTGGGATTACCCGCTG-AACTTA- Rhizomucor_miehei_JF412011 ATTGCTCCAGATCTCTCTTTCCTTTTTTTTACGTATTGATTTGACTGAACATTTTTG----TTTTAAAATGAAAAAAAGTTTTGAAGCCAATCAATTGGTTCAAGA----------CAAATCAAATTTT-----------GAAACAACTTTAAGCAATGGATCACTTGGTTCTCGCATCGATGAAGAGCGTAGCAAATTGCGAAAAGTAATGCGATCTGCAGCCTTTGCGAATCATCGAATTCTCGAACGCATCTTGCACCCTTTGG-TTCATCCATTGGGTACGTCTAGTTCAGTATCTTTTTGAAAC-----CCTAAAGATTCAATTTTGTTGTTGAATCTT---TGGATTTGCGGTGCTGATGGGGGGGAGGACAAAGCAAATCTTTTGTGTGTCCCCCGTTCAAGCTACTCGAA---CAGTTTTTGAGTTTTTGGCCTTTTTAGATTGGT--GAACATTC----------TTGAAGGGCTTACTTTGATAT-----CTAAAATT-----------------TTCGAATTTTGGGTTATCATTGCTTTGAGAAAACACAATCTAAAAGCAAAAA------------------------------------------------------CTCTATATAAACTTT------------------------- Rhizomucor_miehei_JN206322 ATTGCTCCAGATCTCTCTTTCCTTTTTTTTACGTATTGATTTGACTGAACATTTTTG----TTTTAAAATGAAAAAAAGTTTTGAAGCCAATCAATTGGTTCAAGA----------CAAATCAAATTTT-----------GAAACAACTTTAAGCAATGGATCACTTGGTTCTCGCATCGATGAAGAGCGTAGCAAATTGCGAAAAGTAATGCGAT{CT}TGCAGCCTTTGCGAATCATCGAATTCTCGAACGCATCTTGCACCCTTTGG-TTCATCCATTGGGTACGTCTAGTTCAGTATCTTTTTGAAAC-----CCTAAAGATTCAATTTTGTTGTTGAATCTT---TGGATTTGCGGTGCTGATGGGGGGGAGGACAAAGCAAATCTTTTGTGTGTCCCCCGTTCAAGCTACTCGAA---CAGTTTTTGAGTTTTTGGCCTTTTTAGATTGGT--GAACATTC----------TTGAAGGGCTTACTTTGATAT-----CTAAAATT-----------------TTCGAATTTTGGGTTATCATTGCTTTGAGAAAACACAATCTAAAAGCAAAAACTCTATATAAACTTTTTTTTTTTTTCATTC------------------------ATGGATCTGAACTTAGACAGGACTACCC------------ Rhizomucor_miehei_JX644572 ATTGCTCCAGATCTCTCTTTCCTTTTTTTTACGTATTGATTTGACTGAACATTTTTG----TTTTAAAATGAAAAAAAGTTTTGAAGCCAATCAATTGGTTCAAGA----------CAAATCAAATTTT-----------GAAACAACTTTAAGCAATGGATCACTTGGTTCTCGCATCGATGAAGAGCGTAGCAAATTGCGAAAAGTAATGCGATCTGCAGCCTTTGCGAATCATCGAATTCTCGAACGCATCTTGCACCCTTTGG-TTCATCCATTGGGTACGTCTAGTTCAGTATCTTTTTGAAAC-----CCTAAAGATTCAATTTTGTTGTTGAATCTT---TGGATTTGCGGTGCTGATGGGGGGGAGGACAAAGCAAATCTTTTGTGTGTCCCCCGTTCAAGCTACTCGAA---CAGTTTTTGAGTTTTTGGCCTTTTTAGATTGGT--GAACATTC----------TTGAAGGGCTTACTTTGATAT-----CTAAAATT-----------------TTCGAATTTTGGGTTATCATTGCTTTGAGAAAACACAATCTAAAAGCAAAAA------------------------------------------------------CTCTATATAAACTTTTTT-----------------TTTT- Rhizomucor_pusillus_AB369914 ATTGCTCCAGATCTCTCGACCTTTTATTTTACATATTTGATTGACTGTTG-----------TTTAACAA--ATTGAAAGTTTTGGATCAG---AAATGATTCAAGA-----------CGATAAAATTTC-----------AAAACAACTTTAAGCAATGGATCACTTGGTTCTCGCATCGATGAAGAGCGTAGCAAATTGCGAAAAGTAATGCGATCTGCAGCCTTTGCGAATCATCGAATTCTCGAACGCACCTTGCACCCTTTGG-TTCATCCATTGGGTACGTCTAGTTCAGTATCTTTATTAACC-----CCTAAAGGTTTATTTTTTGATAAATCTT-----TGGATTTGCGGTGCTGATGGAT----------------------TTTCATCC---GTTCAAGCTACCCGAA---CAATTTGTATGTTGTTG----------ACCCTT--GATATTTC----------CTTGAGGGCTTGCATTGGTA------TCTAATTTT----------------TTACCAGTGTGCTTCGAGATGATCAAGTATAA-----------AGGTCAATCAACCACAAATAAATTTC------------------------AACT---------ATGGATCTGAACTTAGATGGGATTACCCGCTG-AACTTA- Rhizomucor_pusillus_EF151443 ATTGCTCCAGATCTCTCGACCTTTTATTTTACATATTTGATTGACTGTTG-----------TTTAACAA--ATTGAAAGTTTTGGATCAG---AAATGATTCAAGA-----------CGATAAAATTTC-----------AAAACAACTTTAAGCAATGGATCACTTGGTTCTCGCATCGATGAAGAGCGTAGCAAATTGCGAAAAGTAATGCGATCTGCAGCCTTTGCGAATCATCGAATTCTCGAACGCACCTTGCACCCTTTGG-TTCATCCATTGGGTACGTCTAGTTCAGTATCTTTATTAACC-----CCTAAAGGTTTATTTTTTGATAAATCTT-----TGGATTTGCGGTGCTGATGGAT----------------------TTTCATCC---GTTCAAGCTACCCGAA---CAATTTGTATGTTGTTG----------ACCCTT--GATATTTC----------CTTGAGGGCTTGCATTGGTA------TCTAATTTT----------------TTACCAGTGTGCTTCGAGATGATCAAGTATAA-----------AGGTCAATCAACCACAAATAAATTTC------------------------AACT---------ATGGATCTGAACTTAGATGGGATTACCCGCTG-AACTTA- Rhizomucor_pusillus_HQ285701 ATTGCTCCAGATCTCTCGACCTTTTATTTTACATATTTGATTGACTGTTG-----------TTTAACAA--ATTGAAAGTTTTGGATCAG---AAATGATTCAAGA-----------CGATAAAATTTC-----------AAAACAACTTTAAGCAATGGATCACTTGGTTCTCGCATCGATGAAGAGCGTAGCAAATTGCGAAAAGTAATGCGATCTGCAGCCTTTGCGAATCATCGAATTCTCGAACGCACCTTGCACCCTTTGG-TTCATCCATTGGGTACGTCTAGTTCAGTATCTTTATTAACC-----CCTAAAGGTTTATTTTTTGATAAATCTT-----TGGATTTGCGGTGCTGATGGAT----------------------TTTCATCC---GTTCAAGCTACCCGAA---CAATTTGTATGTTGTTG----------ACCCTT--GATATTTC----------CTTGAGGGTTTGCATTGGTA------TCTAATTTT----------------TTACCAGTGTGCTTCGAGATGATCAAGTATAA-----------AGGTCAATCAACCACAAATAAATTTC------------------------AACT---------ATGGATCTGAACTTAGATGGGATTACCCGCTG-AACTTA- Rhizomucor_pusillus_HQ285702 ATTGCTCCAGATCTCTCGACCTTTTATTTTACATATTTGATTGACTGTTG-----------TTTAACAA--ATTGAAAGTTTTGGATCAG---AAATGATTCAAGA-----------CGATAAAATTTC-----------AAAACAACTTTAAGCAATGGATCACTTGGTTCTCGCATCGATGAAGAGCGTAGCAAATTGCGAAAAGTAATGCGATCTGCAGCCTTTGCGAATCATCGAATTCTCGAACGCACCTTGCACCCTTTGG-TTCATCCATTGGGTACGTCTAGTTCAGTATCTTTATTAACC-----CCTAAAGGTTTATTTTTTGATAAATCTT-----TGGATTTGCGGTGCTGATGGAT----------------------TTTCATCC---GTTCAAGCTACCCGAA---CAATTTGTATGTTGTTG----------ACCCTT--GATATTTC----------CTTGAGGGTTTGCATTGGTA------TCTAATTTT----------------TTACCAGTGTGCTTCGAGATGATCAAGTATAA-----------AGGTCAATCAACCACAAATAAATTTC------------------------AACT---------ATGGATCTGAACTTAGATGGGATTACCCGCTG-AACTTA- Rhizomucor_pusillus_HQ285716 ATTGCTCCAGATCTCTCGACCTTTTATTTTACATATTTGATTGACTGTTG-----------TTTAACAA--ATTGAAAGTTTTGGATCAG---AAATGATTCAAGA-----------CGATAAAATTTC-----------AAAACAACTTTAAGCAATGGATCACTTGGTTCTCGCATCGATGAAGAGCGTAGCAAATTGCGAAAAGTAATGCGATCTGCAGCCTTTGCGAATCATCGAATTCTCGAACGCACCTTGCACCCTTTGG-TTCATCCATTGGGTACGTCTAGTTCAGTATCTTTATTAACC-----CCTAAAGGTTTATTTTTTGATAAATCTT-----TGGATTTGCGGTGCTGATGGAT----------------------TTTCATCC---GTTCAAGCTACCCGAA---CAATTTGTATGTTGTTG----------ACCCTT--GATATTTC----------CTTGAGGGCTTGCATTGGTA------TCTAATTTT----------------TTACCAGTGTGCTTCGAGATGATCAAGTATAA-----------AGGTCAATCAACCACAAATAAATTTC------------------------AACT---------ATGGATCTGAACTTAGATGGGATTACCCGCTG-AACTTA- Rhizomucor_pusillus_HQ404243 ATTGCTCCAGATCTCTCGACCTTTTATTTTACATATTTGATTGACTGTTG-----------TTTAACAA--ATTGAAAGTTTTGGATCAG---AAATGATTCAAGA-----------CGATAAAATTTC-----------AAAACAACTTTAAGCAATGGATCACTTGGTTCTCGCATCGATGAAGAGCGTAGCAAATTGCGAAAAGTAATGCGATCTGCAGCCTTTGCGAATCATCGAATTCTCGAACGCACCTTGCACCCTTTGG-TTCATCCATTGGGTACGTCTAGTTCAGTATCTTTATTAACC-----CCTAAAGGTTTATTTTTTGATAAATCTT-----TGGATTTGCGGTGCTGATGGAT----------------------TTTCATCC---GTTCAAGCTACCCGAA---CAATTTGTATGTTGTTG----------ACCCTT--GATATTTC----------CTTGAGGGTTTGCATTGGTA------TCTAATTTT----------------TTACCAGTGTGCTTCGAGATGATCAAGTATAA-----------AGGTCAATCAACCACAAATAAATTTC------------------------AACT---------ATGGATCTGAACTTAGATGGGATTACCCGCTG-AACTTA- Rhizomucor_pusillus_HQ404245 ATTGCTCCAGATCTCTCGACCTTTTATTTTACATATTTGATTGACTGTTG-----------TTTAACAA--ATTGAAAGTTTTGGATCAG---AAATGATTCAAGA-----------CGATAAAATTTC-----------AAAACAACTTTAAGCAATGGATCACTTGGTTCTCGCATCGATGAAGAGCGTAGCAAATTGCGAAAAGTAATGCGATCTGCAGCCTTTGCGAATCATCGAATTCTCGAACGCACCTTGCACCCTTTGG-TTCATCCATTGGGTACGTCTAGTTCAGTATCTTTATTAACC-----CCTAAAGGTTTATTTTTTGATAAATCTT-----TGGATTTGCGGTGCTGATGGAT----------------------TTTCATCC---GTTCAAGCTACCCGAA---CAATTTGTATGTTGTTG----------ACCCTT--GATATTTC----------CTTGAGGGTTTGCATTGGTA------TCTAATTTT----------------TTACCAGTGTGCTTCGAGATGATCAAGTATAA-----------AGGTCAATCAACCACAAATAAATTTC------------------------AACT---------ATGGATCTGAACTTAGATGGGATTACCCGCTG-AACTTA- Rhizomucor_pusillus_HQ404247 ATTGCTCCAGATCTCTCGACCTTTTATTTTACATATTTGATTGACTGTTG-----------TTTAACAA--ATTGAAAGTTTTGGATCAG---AAATGATTCAAGA-----------CGATAAAATTTC-----------AAAACAACTTTAAGCAATGGATCACTTGGTTCTCGCATCGATGAAGAGCGTAGCAAATTGCGAAAAGTAATGCGATCTGCAGCCTTTGCGAATCATCGAATTCTCGAACGCACCTTGCACCCTTTGG-TTCATCCATTGGGTACGTCTAGTTCAGTATCTTTATTAACC-----CCTAAAGGTTTATTTTTTGATAAATCTT-----TGGATTTGCGGTGCTGATGGAT----------------------TTTCATCC---GTTCAAGCTACCCGAA---CAATTTGTATGTTGTTG----------ACCCTT--GATATTTC----------CTTGAGGGTTTGCATTGGTA------TCTAATTTT----------------TTACCAGTGTGCTTCGAGATGATCAAGTATAA-----------AGGTCAATCAACCACAAATAAATTTC------------------------AACT---------ATGGATCTGAACTTAGATGGGATTACCCGCTG-AACTTA- Rhizomucor_pusillus_JN206312 ATTGCTCCAGATCTCTCGACCTTTTATTTTACATATTTGATTGACTGTTG-----------TTTAACAA--ATTGAAAGTTTTGGATCAG---AAATGATTCAAGA-----------CGATAAAATTTC-----------AAAACAACTTTAAGCAATGGATCACTTGGTTCTCGCATCGATGAAGAGCGTAGCAAATTGCGAAAAGTAATGCGATCTGCAGCCTTTGCGAATCATCGAATTCTCGAACGCACCTTGCACCCTTTGG-TTCATCCATTGGGTACGTCTAGTTCAGTATCTTTATTAACC-----CCTAAAGGTTTATTTTTTGATAAATCTT-----TGGATTTGCGGTGCTGATGGAT----------------------TTTCATCC---GTTCAAGCTACCCGAA---CAATTTGTATGTTGTTG----------ACCCTT--GATATTTC----------CTTGAGGGCTTGCATTGGTA------TCTAATTTT----------------TTACCAGTGTGCTTCGAGATGATCAAGTATAA-----------AGGTCAATCAACCACAAATAAATTTC------------------------AACT---------ATGGATCTGAACTTAGATGGGATTACCC------------ Rhizomucor_pusillus_JQ796883 ATTGCTCCAGATCTCTCGACCTTTTATTTTACATATTTGATTGACTGTTG-----------TTTAACAA--ATTGAAAGTTTTGGATCAG---AAATGATTCAAGA-----------CGATAAAATTTC-----------AAAACAACTTTAAGCAATGGATCACTTGGTTCTCGCATCGATGAAGAGCGTAGCAAATTGCGAAAAGTAATGCGATCTGCAGCCTTTGCGAATCATCGAATTCTCGAACGCACCTTGCACCCTTTGG-TTCATCCATTGGGTACGTCTAGTTCAGTATCTTTATTAACC-----CCTAAAGGTTTATTTTTTGATAAATCTT-----TGGATTTGCGGTGCTGATGGAT----------------------TTTCATCC---GTTCAAGCTACCCGAA---CAATTTGTATGTTGTTG----------ACCCTT--GATATTTC----------CTTGAGGGTTTGCATTGGTA------TCTAATTTT----------------TTACCAGTGTGCTTCGAGATGATCAAGTATAA-----------AGGTCAATCAACCACAAATAAATTTC------------------------AACT---------ATGGATCTGAACTTAGATGGGATTACCCGCTG-AACTTA- Rhizomucor_pusillus_JX661046 ATTGCTCCAGATCTCTCGACCTTTTATTTTACATATTTGATTGACTGTTG-----------TTTAACAA--ATTGAAAGTTTTGGATCAG---AAATGATTCAAGA-----------CGATAAAATTTC-----------AAAACAACTTTAAGCAATGGATCACTTGGTTCTCGCATCGATGAAGAGCGTAGCAAATTGCGAAAAGTAATGCGATCTGCAGCCTTTGCGAATCATCGAATTCTCGAACGCACCTTGCACCCTTTGG-TTCATCCATTGGGTACGTCTAGTTCAGTATCTTTATTAACC-----CCTAAAGGTTTATTTTTTGATAAATCTT-----TGGATTTGCGGTGCTGATGGAT----------------------TTTCATCC---GTTCAAGCTACCCGAA---CAATTTGTATGTTGTTG----------ACCCTT--GATATTTC----------CTTGAGGGCTTGCATTGGTA------TCTAATTTT----------------TTACCAGTGTGCTTCGAGATGATCAAGTATAA-----------AGGTCAATCAACCACAAATAAATTTC------------------------AACT---------ATGGATCTGAACTTAGATGGGATTACCCGCTGAAACTTA- Rhizomucor_tauricus_JN206310 ATTGCTCCAGATCTCTCGACCTTTTATTTTACATATTTGATTGACTGTTG-----------TTTAACAA--ATTGAAAGTTTTGGATCAG---AAATGATTCAAGA-----------CGATAAAATTTC-----------AAAACAACTTTAAGCAATGGATCACTTGGTTCTCGCATCGATGAAGAGCGTAGCAAATTGCGAAAAGTAATGCGATCTGCAGCCTTTGCGAATCATCGAATTCTCGAACGCACCTTGCACCCTTTGG-TTCATCCATTGGGTACGTCTAGTTCAGTATCTTTATTAACC-----CCTAAAGGTTTATTTTTTGATAAATCTT-----TGGATTTGCGGTGCTGATGGAT----------------------TTTCATCC---GTTCAAGCTACCCGAA---CAATTTGTATGTTGTTG----------ACCCTT--GATATTTC----------CTTGAGGGCTTGCATTGGTA------TCTAATTTT----------------TTACCAGTGTGCTTCGAGATGATCAAGTATAA-----------AGGTCAATCAACCACAAATAAATTTC------------------------AACT---------ATGGATCTGAACTTAGATGGGATTACCC------------ Thamnostylum_piriforme_JX629062 GCTCCAATGGTATTTCGGTACCAAACTTTTATATATACTATT-------------TTGTCAGATATGAA--AACTGAGGTTTTTGGTCTT---AATTGACT------ATCCTCTTTTAACTGTAGTTTT-----ACTACAAAAACAACTTTTAGCAATGGATCTCTTGGTTTCCGCATCGATGAAGAGCGTAGCAAATTGCGATAACTAGTGCGAATTGCAGACTTTGTGAATCATCGAGTTCTTGAACGCATCTTGCACCTAGTGGTTTATTCTACTAGGTACGGTTGCTTCAGTATC---ACGAAAC------TCACCAACTCAACCTTTTGGGGTTGAAGA---TGGAGCTGGACTTGCTAGGATC---------------------GTTTTTTTTACGGTCTTGGTAGTCTGAAATAGAGTAT---------------------ACCAAA--TGTCTTTTTGACCTTGTTTCAAAGAGATTGGACTATAAAGTGTACCTAGGTTCGGTATGATT-------TACCTAGTGTCGTCTGATCTTT-------------------GGAGGTTAA--------------------------------------------------------TGTGATTGGGATTTTGGTGG-------------AGGTTA- 'Thermomucor indicae-seudaticae JN206302' GACGATCCGGGTGTTTTATCCACATATTTATTATTATTATTC---------------AACCCATCGGGA--AACGAAGGTGGTGGTT-------GTTGATTT----TTCTCCCTATTGAAAAGGG-------GAAGAATAAAAACAACTTTCAGCAATGGATCTCTTGGTTCTCGCATCGATGAAGAGCGTAGCAAATTGCGATAATTAATGCGAATTGCA--TTTCGTGAGTCATCGAGTTCTCGAACGCACCTTGCACCTTTGGG--TAATCCGA-AGGTACGTCTGTTTCAGAATCAGACAGAAAC----CGCACACAACTCAGGGTTGTGGATTT--------GGGAGAAAAGTTTGCCTCGGGT---------------------------------CAGCTTGTCTCCTTAAAAATAGTT----------------------ACCCAA--GGTCGGAG----------GTGGGGGCTCTGTTCCGGTAG-----TTCCTATC-----------------TTTTTACTGTGAGTAGGGCTCTT---ACGCGA---------CCGTGTCAAAC------------------------------------------------------CCTGATCTGAAATCAGACGAGACTACCCGCTG------A- Uncultured_compost_fungus_AM711501 ATTGCTCCAGATCTCTCGACCTTTTATTTTACATATTTGATTGACTGTTG-----------TTTAACAA--ATTGAAAGTTTTGGATCAG---AAATGATTCAAGA-----------CGATAAAATTTC-----------AAAACAACTTTAAGCAATGGATCACTTGGTTCTCGCATCGATGAAGAGCGTAGCAAATTGCGAAAAGTAATGCGATCTGCAGCCTTTGCGAATCATCGAATTCTCGAACGCACCTTGCACCCTTTGG-TTCATCCATTGGGTACGTCTAGTTCAGTATCTTTATTAACC-----CCTAAAGGTTTATTTTTTGATAAATCTT-----TGGTTTTGCGGTGCTGATGGAT----------------------TTTCATCC---GTTCAAGCTACCCGAA---CAATTTGTATGTTGTTG----------ACCCTT--GATATTTC----------CTTGAGGGCTTGCATTGGTA------TCTAATTTT----------------TTACCAGTGTGCTTCGAGATGATCAAGTATAA-----------AGGTCAATCAACCACAAATAAATTTC------------------------AACT---------ATGGATCTGAACTTAGATGGGATTACCCGCTG-AACTTA- ; END; BEGIN TREES; TITLE Eurotiales; LINK TAXA = Taxa2; TRANSLATE 1 Thermomyces_lanuginosus_AB085929, 2 Coccidioides_immitis_AB232891, 3 Uncultured_compost_fungus_AM711400, 4 Aspergillus_fumigatus_AY214448, 5 Aspergillus_niger_AY939784, 6 Coccidioides_immitis_EF186790, 7 Thermoascus_aurantiacus_EU021617, 8 Uncultured_compost_fungus_FM177684, 9 Aspergillus_fumigatus_GU566217, 10 Eurotiales_sp._JN659413, 11 Eurotiales_sp._JN659418, 12 Eurotiales_sp._JN659425, 13 Eurotiales_sp._JN659468, 14 Eurotiales_sp._JN659471, 15 Eurotiales_sp._JN659472, 16 Thermomycesl_anuginosus_JQ639282, 17 Thermoascus_crustaceus_JX845310, 18 Thermomyces_dupontii_KC342037, 19 Aspergillus_fumigatus_KF651175, 20 Thermomyces_dupontii_KF728887, 21 Corn_isolate_TAFCg4, 22 Corn_isolate_TAFCg5, 23 Corn_isolate_TAFCg7, 24 Corn_isolate_TAFCn24, 25 Corn_isolate_TAFCn48, 26 Corn_isolate_TAFCn8, 27 Corn_isolate_TAFCs1, 28 Corn_isolate_TCSB141, 29 Corn_isolate_TCSB240, 30 Corn_isolate_TCSB342, 31 Corn_isolate_TCSB36, 32 Corn_isolate_TCSB5; TREE tree_1 = [&R] ((2:0.004743,6:0.020333):0.1965915,((((7:0.003571,14:0.0):0.068181,(17:0.0,31:0.0):0.017441):0.025242,(5:0.068413,(9:0.0,((4:0.0,29:0.0):0.0,(19:0.0,(15:0.010149,30:0.0):0.0):0.001967):0.0):0.049943):0.085472):0.045261,((1:0.0,(16:0.0,(21:0.0,(22:0.0,(26:0.0,(28:0.0,(12:0.0,32:0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.014428,(8:0.0,((13:0.0,(18:0.00193,(3:0.001834,23:0.0):0.0):0.0):0.003678,((11:0.0,25:0.003183):0.001842,(20:0.0,(24:0.0,(10:0.0,27:0.0):0.0):0.0):0.0):0.001842):0.0):0.01833):0.133057):0.1965915); END; BEGIN TREES; TITLE Mucorales; LINK TAXA = Taxa1; TRANSLATE 1 'Thermomucor indicae-seudaticae JN206302', 2 Phycomyces_blakesleeanus_JN206308, 3 Phycomyces_blakesleeanus_AY997071, 4 Rhizomucor_miehei_JN206322, 5 Rhizomucor_miehei_JF412011, 6 Rhizomucor_miehei_JX644572, 7 Corn_isolate_TAFCn2, 8 Corn_isolate_TAFCn11, 9 Rhizomucor_pusillus_HQ404245, 10 Uncultured_compost_fungus_AM711501, 11 Rhizomucor_pusillus_HQ285716, 12 Rhizomucor_pusillus_JN206312, 13 Rhizomucor_tauricus_JN206310, 14 Rhizomucor_pusillus_JX661046, 15 Rhizomucor_pusillus_AB369914, 16 Rhizomucor_pusillus_EF151443, 17 Rhizomucor_pusillus_HQ285702, 18 Rhizomucor_pusillus_HQ285701, 19 Corn_isolate_TAFCN20, 20 Rhizomucor_pusillus_HQ404247, 21 Rhizomucor_pusillus_HQ404243, 22 Rhizomucor_pusillus_JQ796883, 23 Corn_isolate_TAFCn35, 24 Corn_isolate_TAFCg8, 25 Circinella_sp._JX644553, 26 Fennellomyces_linderi_FJ713096, 27 Circinella_muscae_JN205854, 28 Thamnostylum_piriforme_JX629062, 29 Lichtheimia_corymbifera_FJ719398, 30 Dichotomocladium_floridanum_JQ775409; TREE Imported_tree_1 = [&R] ((2:1.0E-8,3:0.03305248):0.238454775,(((25:0.04734005,(26:0.00706194,27:0.00786334):0.05886198):0.13424828,(28:0.32471505,(29:0.33798041,30:0.39876397):0.12366231):0.05621481):0.10200321,(1:0.38892951,((4:3.5E-7,(5:1.0E-8,6:1.2E-7):0.01855799):0.24019806,((13:8.0E-8,14:1.0E-8):8.0E-8,(12:1.0E-7,(11:7.0E-8,(10:0.00211164,(15:1.0E-8,(16:1.0E-8,((23:1.4E-7,24:0.00264865):0.00797733,(21:1.0E-8,(20:1.0E-8,((17:1.0E-8,18:1.0E-8):1.0E-8,((22:1.0E-8,9:4.0E-8):4.0E-8,(19:0.00697933,(8:0.01249273,7:0.02138374):0.01000497):0.00529812):1.1E-7):1.8E-7):2.2E-7):2.2E-7):0.00211155):2.3E-7):2.5E-7):1.9E-7):2.5E-7):1.0E-7):0.10519215):0.35068647):0.0700213):0.238454775); END;