#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on April 19, 2024; 4:52 GMT TreeBASE (cc) 1994-2008 Study reference: Gonçalves M.F., & Alves A. 2019. Trichoderma aestuarinum. Persoonia, 43: 223-425. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S24289] BEGIN TAXA; TITLE Taxa1; DIMENSIONS NTAX=21; TAXLABELS 'Trichoderma aestuarinum CMG_1_TYPE' 'Trichoderma gamsii CBS_120072_TYPE' 'Trichoderma gamsii GJS_04_09' 'Trichoderma gamsii GJS_92_60' 'Trichoderma harzianum CBS_226_95_TYPE' 'Trichoderma hispanicum CBS_130538' 'Trichoderma hispanicum CBS_130540_TYPE' 'Trichoderma junci CBS_120926_TYPE' 'Trichoderma koningii CBS_119500' 'Trichoderma koningii CBS_457_96_TYPE' 'Trichoderma neokoningii CBS_120070_TYPE' 'Trichoderma nothescens CBS_134882_TYPE' 'Trichoderma paraviridescens CBS_119321_TYPE' 'Trichoderma samuelsii CBS_130537_TYPE' Trichoderma_samuelsii_S42 'Trichoderma trixiae CBS_134702_TYPE' 'Trichoderma trixiae GJS_99_11' 'Trichoderma vinosum CBS_119087_TYPE' 'Trichoderma vinosum GJS_99_156' 'Trichoderma vinosum GJS_99_183' 'Trichoderma viridescens CBS_433_34_TYPE' ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M53262] TITLE Trichoderma_combined_ITS_TEF; LINK TAXA = Taxa1; DIMENSIONS NCHAR=1295; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] 'Trichoderma aestuarinum CMG_1_TYPE' ACGCGGAGGGA-CATTACCGAGTTTACAACTCCCAAACCC-AATGTGAACCATACCAAACTGTTGCCTCGGCGGGGTCAC-GCCCCGGGTGCGTCGCAGCCCCGGAACCAGGCGCCCGCCGGAGGGACCAACC--AAACTCTTT-CTGTA-GTCCCCTCGCGGACGTTATTTCTTACAGCTCTGAG-C-----------------AAAAATTC--AAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGAACGGGAGCCCCTAAGACGGGATCCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCATGCGCAGTAGTTTGCACAACTCGCACCGGGAGCGCGGCGCGTCCACGTCCGTAAAACACCCAACTTCTGAAATG-TTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGTACATCGAGAAGTTCGAGAAGGTAAGCTCATTTCACTGCTTTT-TCACTACGCTTTC-------ATGGCAC--AATCGTGT--CCGACAATTCTGTT------CTCAGTCTTGACAATTTTTC--TCGCATCGTCACACCCCGCTCTACC--TGTC----TACCCCTCCTTTG--GCACAGCA-AAATTTTCTGGCTGCCTTGTTTGGCTTTTAGTGGGGTGCCAACTTTTTTTTT--------GGCAACAACCCCGCTA--TCGCCGTCCTATCGCCGTTTTCCCTCATCTATCGTCCCAACAATTTGTTC-CCACTCAAT-CACATCGTCTTTTGCCTCATTTTCTCCCT-GTCCATTG-TGCTGATCATGATTCAATCAATAGGAAGCCGCCGAACTCGGCAAGGGTTCTTTCAAGTATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTATGTT-TTGGTTTCCTCATTGACAC-CTCCGAAAT----CATCATT-CTAACTTGTCGCTCCACAGACGCTCCCGGCCACCGTGATTTCATCAAGAACATGATCACTGG-TACCTCCCAGGCTGACTGCGCTATCCTGATTATCGCTGCCGGTACTGGTGAGTTCGAGG 'Trichoderma gamsii CBS_120072_TYPE' CAGCGGAGGGATCATTACCGAGTTTACAACTCCCAAACCC-AATGTGAACCATACCAAACTGTTGCCTCGGCGGGGTCAC-GCCCCGGGTGCGTCGCAGCCCCGGAACCAGGCGCCCGCCGGAGGGACCAACC--AAACTCTTTTCTGTA-GTCCCCTCGCGGACGTTATTTCTTACAGCTCTGAG-C-----------------AAAAATTC--AAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGATCGGGAACCCCTAAGACGGGATCCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACAACTCGCACCGGGAGCGCGGCGCGTCCACGTCCGTAAAACACCCAACTTCTGAAATG-TTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAA-----------------------TAAGCTAATTTCACTACTTTT-TCACTACGCTTTC-------TTGGCAC--AATCGTGT--CCGACAATCCTGTT------CTCAGTCTTGTCAATTTTTTTCTTGCATCGTCACACCCCGCTCTACC--TGTCTC--TACCCCTCCTTTG--GCACAGCAAAAATTTTCTGGCTGCCTTGTTTGGTTTTTAGTGGGGTGCCAGCTTTTTTTT-------CTGGC---AACCCCGCTAA-TCGCCGC-----------TGTCCCTCATCCATCGTCTTAACAATTTG--T-TCACTCAAT-CGCATC----------TCATTTTCTCCGTGGTTCAATG-TGCTGATCATGATTCAATCAATAGGAAGCCGCCGAACTCGGCAAGGGTTCTTTCAAGTATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTATGTT-TTAGTATCCTCATTGGCA--TTTCGAAAT----CATGATT-CTAACGTGCCACTCTACAGACGCTCCCGGCCACCGTGATTTCATCAAGAACATGATCACTGG-TACCTCCCAGGCTGACTGCGCTATCCTGATTATCGCTGCCGGTACTGGTGAGTTCGAGG 'Trichoderma gamsii GJS_04_09' -----------TCATTACCGAGTTTACAACTCCCAAACCC-AATGTGAACCATACCAAACTGTTGCCTCGGCGGGGTCAC-GCCCCGGGTGCGTCGCAGCCCCGGAACCAGGCGCCCGCCGGAGGGACCAACC--AAACTCTTTTCTGTA-GTCCCCTCGCGGACGTTATTTCTTACAGCTCTGAG-C-----------------AAAAATTC--AAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGATCGGGAACCCCTAAGACGGGATCCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACAACTCGCACCGGGAGCGCGGCGCGTCCACGTCCGTAAAACACCCAACTTCTGAAATG-TTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAA--------------------AGGTAAGCTAATTTCACTATTTTTATCACTACGCTTTA-------TTGGCAC--AGTCGTGTGTCCGACAATCCTGTT------CTCAGTCTTGTCAATTTTTTTCTCGCATCGTCACACCCCGCTCTACC--TGTCTC--TACCCCTCCTTTG--GCACAGCAAAAATTTTCTGGCTGCCTTGTTTGGTTTTTAGTGGGGTGCCAGCTTTTTTTTTT-----CTGGC---AACCCCGCTAA-TCGCCGC-----------TGTCCCTCATCCATCGTCTTCACAATTTG--T-TCACTCAAT-CGCATC----------TCATTTTCTCCGTGGTTCAATG-TGCTGATCATGATTCAATCAATAGGAAGCCGCCGAACTCGGCAAGGGTTCTTTCAAGTATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTATGTT-TTAGTATCCTCATTGGCG--TTTCGAAAT----CATGATT-CTAACGTGCCACTCTACAGACGCTCCCGGCCACCGTGATTTCATCAAG-------------------------------------------------------------------------- 'Trichoderma gamsii GJS_92_60' -----------TCATTACCGAGTTTACAACTCCCAAACCC-AATGTGAACCATACCAAACTGTTGCCTCGGCGGGGTCAC-GCCCCGGGTGCGTCGCAGCCCCGGAACCAGGCGCCCGCCGGAGGGACCAACC--AAACTCTTTTCTGTA-GTCCCCTCGCGGACGTTATTTCTTACAGCTCTGAG-C-----------------AAAAATTC--AAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGATCGGGAACCCCTAAGACGGGATCCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACAACTCGCACCGGGAGCGCGGCGCGTCCACGTCCGTAAAACACCCAACTTCTGAAATG-TTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAA-----------------AGAAGGTAAGCTAATTTCACTACTTTTATCACTACGCTTTG-------TTGGCAC--AGTCGTGTGTCCGACAATCCTGTT------CTCAGTCTTGTCAATTTTTCTCTCGCATCGTCACACCCCGCTCTACC--TGTCTC--TACCCCTCCTTTG--GCACAGCAAAAATTTTCTGGCTGCCTT---TGGTTTTTAGTGGGGTGCTAGCTTTTTTTTT------CTGGC---AACCCCGCTAA-TCGCCTC-----------TGTCCCTCATCCATCGTCTTAACAATTTG--T-TCACTCAAT-CGCATC----------TCATTTTCTCTGTGGTTCAATG-TGCTGATCATGATTCAATCAATAGGAAGCCGCCGAACTCGGCAAGGGTTCTTTCAAGTATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTATGTT-TTAGTATCCTCATTGGCG--TTTCGAAAT----CATGATT-CTAACGTGCCACTCTACAGACGCTCCCGGCCACCGTGATTTCATCAAG-------------------------------------------------------------------------- 'Trichoderma harzianum CBS_226_95_TYPE' ----------------------TTTACAACTCCCAAACCC-AATGTGAACGTTACCAAACTGTTGCCTCGGCGGGATCTCTGCCCCGGGTGCGTCGCAGCCCCGGACCAAGGCGCCCGCCGG{AG}{AG}G-ACCAACCTAAAACTCTTA-TTGTATACCCCCTCGCGG--GTTTTTTTTTATAA-TCTGAGCCTTCTCGGCGCCTCTCGTAGGCGTTTCGAAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAA{AG}AACGCAGCGAAATGCGATAAGTAATGTGAATTGCA{AG}AATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGATCGGCCCTCCCTTAG-CGGGTGGCCGTCTCCGAAATACAG{GT}GGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGC{AC}CA-CTCGCATCGGGAGCGCGGCGCGTCCACAGCCGTTAAACACCCAACTTCTGAAATG-TTGACC{CT}CGGATCAGGTAGGAATACCCGCTGAACTTAATACCATCGAGAAGTTCGAGAAGGTAAGCT--TCAACTCATTTTCGCCTCGATTCTCCC-------TCCACATTTAATTGTGC--CCGATAATTCTGCAGAGAATTTTCGTGTCGACAATTTTT---------CATCAC--CCCGATTTGCAT---------TACCCCTCCTTTGCAGCGACGCA-AATTTTTTTGGCTG--TCGTTTGG-TTTTAGTGGGGT-------TTCTCGT----------GC----ACCCCACTAGGTCACTGC-----------TTTTTTTC-TGCTTCGCTCTTACTGCCCAGCCATCATTCAACGTGCTCTGCGTCT--CATCACT----------TTCAGCGATGCTAACCACTTTTCCATCAATAGGAAGCCGCCGAACTCGGCAAGGGTTCCTTCAAGTACGCTTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCTCTGTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTATGTTCTTTCCATCAAC-TTCACA----CAGCGATTACAAGCCAGTGCTAACAAGCAATTC-ACAGACGCTCCCGGCCACCGTGATTTCATCAAGAACATGATCACTGG-TACTTCCCAGGCCGATTGCGCTATCCTCATCATTGCCGCCGGTACTGGTGAG------- 'Trichoderma hispanicum CBS_130538' CAGCGGAGGGATCATTACCGAGTTTACAACTCCCAAACCC-AATGTGAACCATACCAAACTGTTGCCTCGGCGGGGTCAC-GCCCCGGGTGCGTCGCAGCCCCGGAACCAGGCGCCCGCCGGAGGGACCAACC--AAACTCTTT-CTGTA-GTCCCCTCGCGGACGTTATTTCTTACAGCTCTGAG-C-----------------AAAAATTC--AAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGATCGGGAACCCCTAAGACGGGATCCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCATGCGCAGTAGTTTGCACAACTCGCACCGGGAGCGCGGCGCGTCCACGTCCGTAAAACACCCAACTTCTGAAATG-TTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAA---------------------------------------------------CGCTTTC-------TTGGCGC--A-TCGTGT--CCGACAATTCTGTT------CTCAGTCTTGACAATTTTT--CTCGCATCGTCACACCCCGCTCTATCTCTGTC----TACCCCTCCTTTG--GCACAGCAAAAATTTTCTGGCTGCCTTGTTTGGCTTTTAGTGGGGTGTCGACTTTTTTTTTTTT-----GGC---AACCCCGCTT--TCGCCGC-----------TGTCCCTCACCCATCGTCCCAACAACTTGTTC-TCACTCAAT-CACATCGTCTTTAGCCTCATTTTTCTCGTAGTTCATTG-GGCTGATCAGGATTCAATCAATAGGAAGCCGCCAAATTTGGCAAGGGTTCTTTCAAGTATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTATGTT-TTGGTTTCCTCATTGACAC-TCCCGAAAT----CATCATT-CTAACGTGCCGCTCCACAGACGCTCCCGGCCACCGTGATTTCATCAAGAACATGATCACTGG-TACCTCCCAGGCTGACTGCGCTATCCTGATTATCGCTGCCGGTACTGGTGAGTTCGAGG 'Trichoderma hispanicum CBS_130540_TYPE' CAGCGGAGGGATCATTACCGAGTTTACAACTCCCAAACCC-AATGTGAACCATACCAAACTGTTGCCTCGGCGGGGTCAC-GCCCCGGGTGCGTCGCAGCCCCGGAACCAGGCGCCCGCCGGAGGGACCAACC--AAACTCTTT-CTGTA-GTCCCCTCGCGGACGTTATTTCTTACAGCTCTGAG-C-----------------AAAAATTC--AAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGATCGGGAACCCCTAAGACGGGATCCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCATGCGCAGTAGTTTGCACAACTCGCACCGGGAGCGCGGCGCGTCCACGTCCGTAAAACACCCAACTTCTGAAATG-TTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAA---------------------------------------------------CGCTTTC-------TTGGCGC--AATCGTGT--CCGACAATTCTGTT------CTCAGTCTTGACAATTTTT--CTCGCATCGTCACACCCCGCTCTATCTCTGTC----TACCCCTCCTTTG--GCACAGCAAAAATTTTCTGGCTGCCTTGTTTGGCTTTTAGTGGGGTGTCGACTTTTTTTTTTTTTTT--GGC---AACCCCGCTT--TCGCCGC-----------TGTCCCTCACCCATCGTCCCAACAACTTGTTC-TCACTCAAT-CACATCGTCTTT-GCCTCATTTTTCTCGTGGTTCATTG-TGCTGATCAGGATTCAATCAATAGGAAGCCGCCGAACTTGGCAAGGGTTCTTTCAAGTATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTATGTT-TTGGTTTCCTCATTGACAC-TCCCGAAAT----CATCATT-CTAACGTGCCGCTCCACAGACGCTCCCGGCCACCGTGATTTCATCAAGAACATGATCACTGG-TACCTCCCAGGCTGACTGCGCTATCCTGATTATCGCTGCCGGTACTGGTGAGTTCGAGG 'Trichoderma junci CBS_120926_TYPE' ------------CATTACCGAGTTTACAACTCCCAAACCCCGATGTGAACCATACCAAACTGTTGCCTCGGCGGGGTCAC-GCCCCGGGTGCGTCGCAGCCCCGGAACCAGGCGCCCGCCGGAGG-ACCAACC--AAACTCTCTTCTGTA-GTCCCCTCGCGGACGTTATTTCTCACAGCTCTGAG-C-----------------AAAAATTC--AAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAACCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCCCCGGGGGTCCGGCGTTGGGGATCGGGAGCCCCTGAGACGGGATCCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCATGCGCAGTAGTTTGCACAACTCGCACCGGGAGCGCGGCGCGTCCACGTCCGTAAAACACCCAACTTCTGAAATG-TTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAA-----------------------------------------------ACTACGTTTTC-------TTGGCAC--CATCGTGT--CCGACAATGCTGTT------CTCAGCCTTGACAATTTTT--CT-GCATCGTCACACCCCGCCCTACC--TGTCTGCATACCCCTCCTTTG--GCACAGAAAATTTTTTCTGGCTGTCTTGTTTGGCTTTTAGTGGGGTGCCA---TTCTTTTG--------GGCTACAACCCCGCTG--TCGCCGC-----------TGTCCCTC---CATCGTCCCAACAATCTGTTT-TCACTTGAT-CACATCGTCTTTTGCTTCATTTTCTCCGCGGTTCATTG-TGCTGATCATGATTCAATCAATAGGAAGCCGCCGAGCTCGGCAAGGGTTCTTTCAAGTATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTATGTT-TTGATTTCCTCACTGACAC-TCCCGAAATT---CATCATT-CTAACGTGCCGCCCCACAGACGCTCCCGGCCACCGTGATTTCATCAAGAACATGATCACTGG-AACCTCCCAGGCTGACTGCGCTATCCTGATTATCGCTGCCGGTACTGGTGAGTTCGAGG 'Trichoderma koningii CBS_119500' ------------CATTACCGAGTTTACAACTCCCAAACCC-AATGTGAACCATACCAAACTGTTGCCTCGGCGGGGTCAC-GCCCCGGGTGCGTCGCAGCCCCGGAACCAGGCGCCCGCCGGAGGGACCAACC--AAACTCTTT-CTGTA-GTCCCCTCGCGGACGTTATTTCTTACAGCTCTGAG-C-----------------AAAAATTC--AAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGATCGGGAACCCCTAAGACGGGATCCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCATGCGCAGTAGTTTGCACAACTCGCACCGGGAGCGCGGCGCGTCCACGTCCGTAAAACACCCAACTTCTGAAATG-TTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAA--------------------------------------------------ACGCT-----------TGACAC--AATCGTGT--CCGACAATTCTGTT------CTCAGTCTTGTCCATCTTC--CTCGCAGCATCACACCCCGCTTTGCC--TGTC----TACCCCTCCTTTG--GCA--GCAAAATTTTTTCTGCTGCATCGTTTGGTTTTTAGTGGGGTGTCAA--TTTTTTTG--------AGC---AACCCCGCTA--TCGCCGC-----------TGTCCCTCGTCCATCGTCTCAACAAATTGCAC-TCTTTCAAT-CGCATCGCCTTT------------------ATTCATTG-TGCTGATCATGTTTCAATCAATAGGAAGCCGCCGAACTCGGCAAGGGTTCTTTCAAGTATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTATGTCATTTCTAACTC--TTGACA--TGTCGAAATTCATCATCATT-CTAACGTGCCGCT--GCAGACGCTCCCGGTCACCGTGATTTCATCAAGAACATGATCACTGG-TACCTCCCAGGCTGACTGCGCTATCCTGATTATCGCTGCCGGTACTGGTGAGTTCGAGG 'Trichoderma koningii CBS_457_96_TYPE' ----------ATCATTACCGAGTTTACAACTCCCAAACCC-AATGTGAACCATACCAAACTGTTGCCTCGGCGGGGTCAC-GCCCCGGGTGCGTCGCAGCCCCGGAACCAGGCGCCCGCCGGAGGGACCAACC--AAACTCTTT-CTGTA-GTCCCCTCGCGGACGTTATTTCTTACAGCTCTGAG-C-----------------AAAAATTC--AAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGATCGGGAACCCCTAAGACGGGATCCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCATGCGCAGTAGTTTGCACAACTCGCACCGGGAGCGCGGCGCGTCCACGTCCGTAAAACACCCAACTTCTGAAATGGTTGACC-----------------------------------CATCGAGAAGTTCGAGAAGGTAAGCTCATTTCCACTGCTTTTTCACCACGCT-----------TGACAC--AATCGTGT--CCGACAATTCTGTT------CTCAGTCTTGTCCATCTTC--CTCGCAGCATCACACCCCGCTTTGCC--TGTC----TACCCCTCCTTTG--GCA--GCAAAATTTTTTCTGCTGCATCGTTTGGTTTTTAGTGGGGTGTCAATTTTTTTG----------AGC---AACCCCGCTA--TCGCCGC-----------TGTCCCTCGTCCATCGTCTCAACAAATTGCAC-TCTTTCAAT-CGCATCGCCTTT------------------ATTCATTG-TGCTGATCATGTTTCAATCAATAGGAAGCCGCCGAACTCGGCAAGGGTTCTTTCAAGTATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTATGTCATTTCTAACTC--TTGACA--TGTCGAAATTCATCATCATT-CTAACGTGCCGCT--GCAGACGCTCCCGGTCACCGTGATTTCATCAAG-------------------------------------------------------------------------- 'Trichoderma neokoningii CBS_120070_TYPE' ----------ATCATTACCGAGTTTACAACTCCCAAACCC-AATGTGAACCATACCAAACTGTTGCCTCGGCGGGGTCAC-GCCCCGGGTGCGTCGCAGCCCCGGAACCAGGCGCCCGCCGGAGGGACCAACC--AAACTCTTTTCTGTA-GTCCCCTCGCGGACGTTATTTCTTACAGCTCTGAG-C-----------------AAAAATTC--AAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGATCGGGAACCCCTAAGACGGGATCCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCCTGCGCAGTAGTTTGCACAACTCGCACCGGGAGCGCGGCGCGTCCACGTCCGTAAAACACCCAACTTCTGAAATGGTTGACC--------------------------------------------------------------------------CTTTTTCGACGCTGTC-------TTGGCAC--AATCGTGT--CGGACAATTCTGTT------CTCAGTCTCA---AATTTT--CTCACATCGTCACACCCCGCTCGACC--TGTCCC--TACCCCTCCTTTG--GCACAGCAAAATTTTTCTGGCTGCCTTGTTTGGCTTTTAGTGGGGTGCCAGCTTTTTTTTC--------TGA---CACCCCGCTA--TCGTCGC-----------TGTCCATCATCCATCATTCCAACAATTTGTTC-TCACTCAAT-CGCATCGTCTTTTATCTCAAATTCTTCGTGGTTCATTG-TGCTGATCATGATTCAATCAATAGGAAGCCGCCGAACTCGGCAAGGGTTCTTTCAAGTATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTATGTT-TTGGTATCCCCATTGACA--TTTCGAAAT----CATTATT-CTAACGTGCCGCTCTACAGACGCTCCCGGCCACCGTGATTTCATCAAGAACATGATCACTGG-TACTTCCCAGGCTGACTGCGCTATCCTGATTATCGCTGCCGGTACTGGTGAGTTCGAGG 'Trichoderma nothescens CBS_134882_TYPE' -----------TCATTACCGAGTTTACAACTCCCAAACCC-AATGTGAACCATACCAAACTGTTGCCTCGGCGGGGTCAC-GCCCCGGGTGCGTCGCAGCCCCGGAACCAGGCGCCCGCCGGAGGGACCAACC--AAACTCTTT-CTGTA-GTCCCCTCGCGGACGTTATTT-TTACAGCTCTGAG-C-----------------AAAAATTC--AAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGATCGGGAACCCCTAAGACGGGATCCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCATGCGCAGTAGTTTGCACAACTCGCACCGGGAGCGCGGCGCGTCCACGTCCGTAAAACACCCAACTTCTGAAATG-TTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAA------------------------------------------------------------------------------------------------------------------------------------------------CTCTCCC--TGCC----TACCCCTCCTTTG--GCACAGCAGAAATTTTCTGGCTGCCTTGTTTGGCTTTTAGTGGGGTGCCATCTTTTTTTTTTTTTTTTTGGCAACAACCCCGCTA--TCGCCGT-----------TGTCCCTCATCCATCGTCCCAACAATTTGATC-TCACTCAAT-CACATCGTCTTCTGCCTCATTTTCTCCGTGGTTCATTG-TGCTAATCATGATTCAATCAATAGGAAGCCGCCGAACTCGGCAAGGGTTCTTTCAAGTATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTATGTT-TTGGTTCCCTCATTGACGC-CCCCGGAAT----CATTGTT-CTAACGTGCCGCTCCACAGACGCTCCCGGCCACCGTGATTTCATCAAG-------------------------------------------------------------------------- 'Trichoderma paraviridescens CBS_119321_TYPE' ACGCGGAGG-ATCATTACCGAGTTTACAACTCCCAAACCC-AATGTGAACCATACCAAACTGTTGCCTCGGCGGGGTCAC-GCCCCGGGTGCGTCGCAGCCCCGGAACCAGGCGCCCGCCGGAGGGACCAACC--AAACTCTTT-CTGTA-GTCCCCTCGCGGACGTTATTT-TTACAGCTCTGAG-C-----------------AAAAATTC--AAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGTCCGGCGTTGGGGATCGGGAACCCCTAAGACGGGATCCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCATGCGCAGTAGTTTGCACAACTCGCACCGGGAGCGCGGCGCGTCCACGTCCGTAAAACACCCAACTTCTGAAATGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAG------------------------------------------------CTACGCTTTC-------TTGACAC--AATCGTGT--CCGACAATTCTGTC------CTCAGTCTTGACAATTTTTT-CTCGCGTCGTCACACCCCGCTCTACC--TGTC----TACCCCTCCTTTG--GCACAGCAGAAATTTTCTGGCTGCCTTGTTTGGCTTTTAGTGGGGTGCCATTTTTTTTTTTT-------GGCAACAACCCCGCTA--TCGCCGT-----------TGTCCCTCATCCCTTGTACCAACAATTTGATC-TCACTCAAT-CACATCGTCTTCTGCCTCATGTTGTCCGTGGTTCATTG-TGCTGATCATAATTCAATCAATAGGAAGCTGCCGAACTCGGCAAGGGTTCTTTCAAGTATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTATGTT-TTGGTTTCCTCATTGACA---CCTGGAAT----CATTATT-CTAACGTGCCGCTCCACAGACGCTCCCGGTCACCGTGATTTCATCAAGAACATGATCACTGG-TACCTCCCAGGCTGACTGCGCTATCCTGATTATCGCTGCCGGTACTGGTGAGTTCGAGG 'Trichoderma samuelsii CBS_130537_TYPE' CAGCGGAGGGATCATTACCGAGTTTACAACTCCCAAACCC-AATGTGAACCATACCAAACTGTTGCCTCGGCGGGGTCAC-GCCCCGGGTGCGTCGCAGCCCCGGAACCAGGCGCCCGCCGGAGGGACCAACC--AAACTCTTT-CTGTA-GTCCCCTCGCGGACGTTATTTCTTACAGCTCTGAG-C-----------------AAAAATTC--AAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGATCGGGAACCCCTAAGACGGGATCCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCATGCGCAGTAGTTTGCACAACTCGCACCGGGAGCGCGGCGCGTCCACGTCCGTAAAACACCCAACTTCTGAAATG-TTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAA---------------------------------------------------CGCTTTC-------TTGGCAC--AATCGTGT--CCGACAATTCTGTTTTCA--CTCAGTCTTGACAAATTTT--GTTGCATCGTCACACCCCGCTCTATCTCTGTC----TACCCCTCCTTTG--GCACAGCAAAAATTTTCTGGCTGCCTTGTTTGGCTTTTAGTGGGGTGCCAATTTTTTTT----------GGC---AACCCCGCTA--TCGCCGC-----------TGTCCCTCATCCATCGTCCCAACAATTTGTTC-TCA----AT-CACATCGTCTTT-GTCTCAATTCCTCCGTGGTTCATTG-TGCTGATCATGATTCAATCAATAGGAAGCCGCCGAACTTGGCAAGGGTTCTTTCAAGTATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTTTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTATGTT-TTGGTTTCCTCATTGACAT-CCCCGAAAT----CATCATT-CTAACGTACCGCTCCACAGACGCTCCCGGCCACCGTGATTTCATCAAGAACATGATCACTGG-TACCTCCCAGGCTGACTGCGCTATCCTGATTATCGCTGCCGGTACTGGTGAGTTCGAGG Trichoderma_samuelsii_S42 CAGCGGAGGGATCATTACCGAGTTTACAACTCCCACACCC-AATGTGAACCATACCAAACTGTTGCCTCGGCGGGGTCAC-GCCCCGGGTGCGTCGCAGCCCCGGAACCAGGCGCCCGCCGGAGGGACCAACC--AAACTCTTT-CTGTA-GTCCCCTCGCGGACGTTATTTCTTACAGCTCTGAG-C-----------------AAAAATTC--AAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGATCGGGAACCCCTAAGACGGGATCCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCATGCGCAGTAGTTTGCACAACTCGCACCGGGAGCGCGGCGCGTCCACGTCCGTAAAACACCCAACTTCTGAAATG-TTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAA---------------------------------------------------CGCTTTC-------TTGGCAC--A-TCGTGT--CCGACAATTCTGTTCTCA--CTCAGTCGTGACAATTTTT--CCTGCATCGTCACACCCCGCTCTATCTCTGTC----TACCCCTCCTTTG--GCACAGCAAAA-TTTTCTGGCTGCCTTGTTTGGCTTTTAGTGGGGTGCCAATTTTTTTTTT--------GGC---AACCCCGCTA--TCGCCAC-----------TGTCCCTCATCCATCGTCCCAACAATTTGTTC-TCA----AT-CACATCGTCTTT-GTCTCAATTCCTCCGTGGTTCATTG-TGCTGATCATGATTCAATCAATAGGAAGCCGCCGAACTTGGCAAGGGTTCTTTCAAGTATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTTTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTATGTT-TTGGTTTCCTCATTGACAT-CCCCGAAAT----CATCATT-CTAACGTACCGCTCCACAGACGCTCCCGGCCACCGTGATTTCATCAAGAACATGATCACTGG-TACCTCCCAGGCTGACTGCGCTATCCTGATTATCGCTGCCGGTACTGGTGAGTTCGAGG 'Trichoderma trixiae CBS_134702_TYPE' ------------------------------------------------------------------------------------------------------------------CCCGCCGGAGGGACCAACC--AAACTCTTT-CTGTA-GTCCCCTCGCGGACGTTATTTCTTACAGCTCTGAGGC-----------------AAAAATTC--AAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGTCCGGCGTTGGGGATCGGGAACCCCTAAGACGGGATCCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCATGCGCAGTAGTTTGCACAACTCGCACCGGGAGCGCGGCGCGTCCACGTCCGTAAAACACCCAACTTCTGAAATG-TTG--------------------------------------------------------------------------------------------------------------------------------CTGTT------CTCAGTCTTGACAATTTTTC-CTCGCGTCGTCACACCCCGCTCTACC--TGTC----TACCCCTCCTTTG--GCACAGCAGAAATTTTCTGGCTGCCTTGTTTGGCTTTTAGTGGGGTGCCATCTTTTTT-----------GGCAACAACCCCGCTA--TCGCCGT-----------TGTCCCTCATCCATCGTCCCAACAATTTGATC-TCACTCAAT-CACATCGTCTTCTGCCTCATTTTCTCTGTGGTTCATTG-TGCTGATCATGATTCGATCAACAGGAAGCCGCCGAACTCGGCAAGGGTTCTTTCAAGTATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTATGTT-TTGGTTTCCTCATTGACAC-CCCCGGAAC----CATTATT-CTAACGTGCCGCTCCACAGACGCTCCCGGTCACCGTGATTTCATCAAGAACATGATCACTGGGTACC------------------------------------------------------- 'Trichoderma trixiae GJS_99_11' ---CGGAGGGATCATTACCGAGTTTACAACTCCCAAACCC-AATGTGAACCATACCAAACTGTTGCCTCGGCGGGGTCAC-GCCCCGGGTGCGTCGCAGCCCCGGAACCAGGCGCCCGCCGGAGGGACCAACC--AAACTCTTT-CTGTA-GTCCCCTCGCGGACGTTATTT-TTACAGCTCTGAG-C-----------------AAAAATTC--AAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGTCCGGCGTTGGGGATCGGGAACCCCTAAGACGGGATCCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCATGCGCAGTAGTTTGCACAACTCGCACCGGGAGCGCGGCGCGTCCACGGA?GTAAAACACCCAAC------------------------------------------------------------------------------------TAAGCTCATTTCACTGCTTTTTCACTACGCTTGGCAC--AATCGTGT--CCGACAATTCTGTT------CTCAGTCTTGACAATTTTTC--TCGCGTCGTCACACCCCGCTCTACC--TGTC----TACCCCTCCTTTG--GCACAGCAGAAATTTTCTGGCTGCCTTGTTTGGCTTTTAGTGGGGTGCCATCTTTTTT-----------GGCAACAACCCCGCTA--TCGCCGT-----------TGTCCCTCATCCATCGTCCCAACAATTTGATC-TCACTCAAT-CACATCGTCTTCTGCCTCATTTTCTCTGTGGTTCATTG-TGCTGATCATGATTCGATCAACAGGAAGCCGCCGAACTCGGCAAGGGTTCTTTCAAGTATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTATGTT-TTGGTTTCCTCATTGACAC-CCCCGGAAC----CATTATT-CTAACGTGCCGCTCCACAGACGCTCCCGGTCACCGTGATTTCATCAAGAACATGATCACTGG-TACTTCCCAGGCTGATTGCGCTATCC--------------------------------- 'Trichoderma vinosum CBS_119087_TYPE' -----------------CCGAGTTTACAACTCCCAAACCC-AATGTGAACCATACCAAACTGTTGCCTCGGCGGGGTCAC-GCCCCGGGTGCGTCGCAGCCCCGGAACCAGGCGCCCGCCGGAGGGACCAACC--AAACTCTTT-CTGTA-GTCCCCTCGCGGACGTTATTTCTTACAGCTCTGAG-C-----------------AAAAATTC--AAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGATCGGGAACCCCTAAGACGGGATCCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCATGCGCAGTAGTTTGCACAACTCGCACCGGGAGCGCGGCGCGTCCACGTCCGTAAAACACCCAACTTCTGAAATG----------------------------------------------------------------------------CTGCTTTTTCACTACGCTTTC-------TTGGCAC--AATCGTGC--CCGACAATTCTGTT------CTCAGTCTTGACAAGTTTT--CTCGCATCGTCACACCCCGCTCTACC--TGTC----TACCCCTCCTTTG--GCACAGCAAAAATTTTCTGGCTGCCTTGATTGGCTTTTAGTGGGGTGCCAACTTTTTTTTTTCT-----GGCAGTAACCCCGCTA--TCGCCGT-----------TGTCCCTCATCCATCGTCCCAACAATTTGATC-TCA----AT-CACATCGTCTTTTGCCTTGTTTTCTCCGTGGTTCATTG-TGCTGATCATGATTCAATCAATAGGAAGCCGCCGAACTCGGCAAGGGTTCTTTCAAGTATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTATGTT-TTGGTTTCCTCATTGATATCCCCCGAAAT----CATCATT-CTAACGTGCCGCTCCACAGACGCTCCCGGTCACCGTGATTTCATCAAGAACATGATCACTGG-TACCTCCCAGGCTGACTGCGCTATCCTGATTATCGCTGCCGGTACTGGTGAGTTCGAGG 'Trichoderma vinosum GJS_99_156' -----------TCATTACCGAGTTTACAACTCCCAAACCC-AATGTGAACCATACCAAACTGTTGCCTCGGCGGGGTCAC-GCCCCGGGTGCGTCGCAGCCCCGGAACCAGGCGCCCGCCGGAGGGACCAACC--AAACTCTTT-CTGTA-GTCCCCTCGCGGACGTTATTTCTTACAGCTCTGAG-C-----------------AAAAATTC--AAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGATCGGGAACCCCTAAGACGGGATCCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCATGCGCAGTAGTTTGCACAACTCGCACCGGGAGCGCGGCGCGTCCACGTCCGTAAAACACCCAACTTCTGAAATG-TTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAA------------------------------------ACTGCTTTTTCACTACGCTTTC-------TTGGCAC--AATCGTGC--CCGACAATTCTATT------CTCAGTCTTGACAAGTTTT--CTCGCATCGTCACACCCCGCTCTACC--TGTC----TACCCCTCCTTTG--GCACAGCGAAAATTTTCTGGCTGCCTTGATTGGCTTTTAGTGGGGTGCCAACTTTTTTCTTTT------GGCAACAACCCCGCTA--TCGCCGT-----------TGTCCCTCATCCATCGTCCCAACAATTTGATC-TCA----AT-CACATCGTCTTTGGCCTCATTTTCTCCGTGGTTCATTG-TGCTGATCATGATTCAATCAATAGGAAGCCGCCGAACTCGGCAAGGGTTCTTTCAAGTATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTATGTT-TTGGTTTCCTCATTGATATCCCCCGAAAT----CATCATT-CTAACGTGCCGCTCCACAGACGCTCCCGGTCACCGTGATTTCATCAAGAACATGATCACTGG-TACCTCCCAGGCTGACTGCGCTATCCTGATTATCGCTGCCGGTACTGGTGAGTTCGAGG 'Trichoderma vinosum GJS_99_183' CAGCGGAGGGATCATTACCGAGTTTACAACTCCCAAACCC-AATGTGAACCCTACCAAACTGTTGCCTCGGCGGGGTCAC-GCCCCGGGTGCGTCGCAGCCCCGGAACCAGGCGCCCGCCGGAGGGACCAACC--AAACTCTTTTCTGTA-GTCCCCTCGCGGACGTTATTTCTTACAGCTCTGAG-C-----------------AAAAATTC--AAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGGTCGGCGTTGGGGATCGGGAACCCCTAAGACGGGATCCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCATGCGCAGTAGTTTGCACAACTCGCACCGGGAGCGCGGCGCGTCCACGTCCGTAAAACACCCAACTTCTGAAATG-TTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAA-----------------------------TCATTTCATGCTTTTTTCACTACGCTTTC-------TTGGCAC--AATCGTGC--CCGACAATTCTATT------CTCAGTCTTGACAAGTTTT--CTCGCATCGTCACACCCCGCTCTACC--TGTC----TACCCCTCCTTTG--GCACAGCGAAAATTTTCTGGCTGCCTTGATTGGCTTTTAGTGGGGTGCCAACTTTTTTCTTTT------GGCAACAACCCCGCTA--TCGCCGT-----------TGTCCCTCATCCATCGTCCCAACAATTTGATC-TCA----AT-CACATCGTCTTTGGCCTCATTTTCTCCGTGGTTCATTG-TGCTGATCATGATTCAATCAATAGGAAGCCGCCGAACTCGGCAAGGGTTCTTTCAAGTATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTATGTT-TTGGTTTCCTCATTGATATCCCCCGAAAT----CATCATT-CTAACGTGCCGCTCCACAGACGCTCCCGGTCACCGTGATTTCATCAAGAACATGATCACTGG-TACCTCCCAGGCTGACTGCGCTATCCTGATTATCGCTGCCGGTACTGGTGAGTTCGAGG 'Trichoderma viridescens CBS_433_34_TYPE' ----------ATCATTACCGAGTTTACAACTCCCAAACCC-AATGTGAACCATACCAAACTGTTGCCTCGGCGGGGTCAC-GCCCCGGGTGCGTCGCAGCCCCGGAACCAGGCGCCCGCCGGAGGGACCAACC--AAACTCTTT-CTGTA-GTCCCCTCGCGGACGTTATTTCTTACAGCTCTGAG-C-----------------AAAAATTC--AAAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCAGTATTCTGGCGGGCATGCCTGTCCGAGCGTCATTTCAACCCTCGAACCCCTCCGGGGGTCCGGCGTTGGGGATCGGGAACCCCTAAGACGGGATCCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTCTCATGCGCAGTAGTTTGCACAACTCGCACCGGGAGCGCGGCGCGTCCACGTCCGTAAAACACCCAACTTCTGAAATGGTTGACC-----------------------------------CATCGAGAAGTTCGAGAAGGTAAGCTCATTTCATTGCTTTT-TCACTACGCTTTC-------TTGGCAC--AATCGTGT--CCGACAATTCTGTT------CTCAGTCTTGACAAATTTT----CGCGTCGTCACACCCCGCTCTACC--TGTC----TACCCCTCCTTTG--GCACAGCAGAAATTTTCTGGCTGCCTTGTTTGGCTTTTAGTGGGGTGCCAA--TTTTTTTT--------GGCAACAACCCCGCTA--TCGCCGT-----------TGTCCCTCATCCATCGTCCCAACAATTTGATC-TCACTCAAT-CACATCGTCTTCTGCCTCATTTTCTCCCTAGTTCATTG-TACTGATCATGATTCAATCAATAGGAAGCCGCCGAACTCGGCAAGGGTTCTTTCAAGTATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTATGTT-TTGGTTTCCTCATTGACAC-CCCCGCAAT----CATTATT-CTAACGTGCCGCTCCACAGACGCTCCCGGTCACCGTGATTTCATCAAG-------------------------------------------------------------------------- ; END; BEGIN TREES; TITLE Trichoderma_combined_ITS_TEF; LINK TAXA = Taxa1; TRANSLATE 1 'Trichoderma gamsii CBS_120072_TYPE', 2 'Trichoderma vinosum GJS_99_183', 3 'Trichoderma gamsii GJS_92_60', 4 'Trichoderma gamsii GJS_04_09', 5 'Trichoderma neokoningii CBS_120070_TYPE', 6 'Trichoderma koningii CBS_457_96_TYPE', 7 'Trichoderma vinosum CBS_119087_TYPE', 8 'Trichoderma aestuarinum CMG_1_TYPE', 9 'Trichoderma vinosum GJS_99_156', 10 'Trichoderma nothescens CBS_134882_TYPE', 11 'Trichoderma samuelsii CBS_130537_TYPE', 12 'Trichoderma hispanicum CBS_130540_TYPE', 13 Trichoderma_samuelsii_S42, 14 'Trichoderma hispanicum CBS_130538', 15 'Trichoderma paraviridescens CBS_119321_TYPE', 16 'Trichoderma trixiae GJS_99_11', 17 'Trichoderma viridescens CBS_433_34_TYPE', 18 'Trichoderma trixiae CBS_134702_TYPE', 19 'Trichoderma koningii CBS_119500', 20 'Trichoderma junci CBS_120926_TYPE', 21 'Trichoderma harzianum CBS_226_95_TYPE'; TREE Imported_tree_1 = [&R] (21:0.10606048,((6:0.0012591,19:0.0):0.02490793,((5:0.03007735,(1:8.4844E-4,(3:0.00445009,4:0.00230723):0.00296671):0.01254316):0.00263489,(20:0.0335973,(((11:0.0022039,13:0.0044115):0.00831582,(12:0.0,14:0.00395882):0.01051869):0.00194352,(8:0.01217155,((2:0.00127238,(7:0.00876295,9:0.0):0.00363224):0.01344805,(10:0.00753304,(17:0.00630166,(15:0.03679818,(16:0.0062661,18:0.0):0.00836359):0.00231321):0.00644026):0.00472854):0.00120067):0.00164308):4.9538E-4):0.00668194):0.02115282):0.10606048); END;