#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on April 24, 2024; 22:51 GMT TreeBASE (cc) 1994-2008 Study reference: Wang Y. 2019. Five novel Lasiodiplodia species associated with blueberries in China. Mycosphere, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S25538] BEGIN TAXA; TITLE Taxa1; DIMENSIONS NTAX=97; TAXLABELS Diplodia_mutila_C Diplodia_seriata Lasiodiplodia_aquilari Lasiodiplodia_avicenniae Lasiodiplodia_avicenniae_2 Lasiodiplodia_brasiliensis Lasiodiplodia_brasiliensis_2 Lasiodiplodia_brasiliensis_3 Lasiodiplodia_bruguierae Lasiodiplodia_bruguierae_2 Lasiodiplodia_caatinguensis Lasiodiplodia_caatinguensis_2 Lasiodiplodia_chinensis Lasiodiplodia_chinensis_2 Lasiodiplodia_chinensis_3 Lasiodiplodia_chinensis_4 Lasiodiplodia_citricola Lasiodiplodia_citricola_2 Lasiodiplodia_clavispo Lasiodiplodia_clavispo_2 Lasiodiplodia_crassispora Lasiodiplodia_crassispora_2 Lasiodiplodia_curvata Lasiodiplodia_curvata_2 Lasiodiplodia_euphorbicola Lasiodiplodia_euphorbicola_2 Lasiodiplodia_euphorbicola_3 Lasiodiplodia_exigua_B Lasiodiplodia_exigua_C Lasiodiplodia_fujianen Lasiodiplodia_gilanensis Lasiodiplodia_gilanensis_2 Lasiodiplodia_gonubien Lasiodiplodia_gonubiensis_2 Lasiodiplodia_gravistr Lasiodiplodia_gravistr_2 Lasiodiplodia_henanica Lasiodiplodia_hormozganensis Lasiodiplodia_hormozganensis_2 Lasiodiplodia_iraniens Lasiodiplodia_iraniens_2 Lasiodiplodia_iraniens_3 Lasiodiplodia_iraniens_4 Lasiodiplodia_iraniens_5 Lasiodiplodia_irregula Lasiodiplodia_laeliocattleyae Lasiodiplodia_laeliocattleyae_2 Lasiodiplodia_laosensi Lasiodiplodia_laosensi_2 Lasiodiplodia_lignicola Lasiodiplodia_macrocon Lasiodiplodia_macrospo Lasiodiplodia_mahajangana Lasiodiplodia_mahajangana_2 Lasiodiplodia_margaritacea Lasiodiplodia_margaritacea_2 Lasiodiplodia_mediterranea Lasiodiplodia_mediterranea_2 Lasiodiplodia_microcon Lasiodiplodia_missouriana Lasiodiplodia_missouriana_2 Lasiodiplodia_nanpinge Lasiodiplodia_nanpinge_2 Lasiodiplodia_paraphys Lasiodiplodia_paraphys_2 Lasiodiplodia_paraphys_3 Lasiodiplodia_parva_CB Lasiodiplodia_parva_CB_2 Lasiodiplodia_plurivora Lasiodiplodia_plurivora_2 Lasiodiplodia_pontae_C Lasiodiplodia_pseudotheobromae Lasiodiplodia_pseudotheobromae_2 Lasiodiplodia_pseudotheobromae_3 Lasiodiplodia_pseudotheobromae_3.2 Lasiodiplodia_pseudotheobromae_4 Lasiodiplodia_pseudotheobromae_5 Lasiodiplodia_pseudotheobromae_6 Lasiodiplodia_pseudotheobromae_C Lasiodiplodia_pyriformis Lasiodiplodia_pyriformis_2 Lasiodiplodia_rubropurpurea Lasiodiplodia_rubropurpurea_2 Lasiodiplodia_sterculiae Lasiodiplodia_subglobosa Lasiodiplodia_subglobosa_2 Lasiodiplodia_tenuicon Lasiodiplodia_thailandica Lasiodiplodia_thailandica_2 Lasiodiplodia_theobromae Lasiodiplodia_theobromae_2 Lasiodiplodia_tropica Lasiodiplodia_venezuel Lasiodiplodia_venezuel_2 Lasiodiplodia_viticola Lasiodiplodia_viticola_2 Lasiodiplodia_vitis_CB ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M53266] TITLE Lasiodiplodia; LINK TAXA = Taxa1; DIMENSIONS NCHAR=498; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Diplodia_mutila_C ------GAAGTTCGAGAAGGTAAGAG----------------GAT-TTTTCCCGTTCC-CGC-ACG----------------TGTGCAGTGCTGCTGC---TGCGCTTATCTGCCGCCCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG---TTTTTGCGACCGGTGTGAGGCCGATGCGCCCCCTCACTAGCGAAAAATGCCCCGACCACTCATGTGC---TCTCGTACGACCACAGGCTAACGCGCGCCACAACA-GGAAGCCGCTGAGCTCGGTAAGGGTTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------- Diplodia_seriata CATCGAGAAGTTCGAGAAGGTAAGAG----------------GAT-TTTTCCCGCTCC-CGC-ACTGC----------------------------GTGCACAGCCCACCTTATCGC-TCGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCTAAACCTCGTCTGAGCTCGGCAAACTGGCCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCGCC-CCTCACTAGCGAGCAATGCCCCGACCACTCATGTGC---TCTCGTACGACCACAGGCTAACGCACGCCACAACA-GGAAGCCGCCGAGCTCGGTAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_aquilari CATCGAGAAGTTCGAGAAG-----TGAGTGAAG----------AT-TTTCCCCAACCC-CGC-T--------------TGGCTCTGCAGCGCTGCGGCGCACAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCATCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACACGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACACGCCCCACTACAGGGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_avicenniae -ATCGAAAAATTTGAGAAG-----TTCGTGATTC---CCAACCCT-GTTTCCCGGCCC-CGC-T--------------TGGCTCTGTAGTGCTGCGGCGCACAGTCCGCCGTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAACGAAAAATGCTCTGACCACTCATGTAC---TGTCGTACGAGCAAAGGCTAACGTGCTCCACTACAGGGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACCCCGAAGTACTATGTCACCGTCATCGACGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCGCA- Lasiodiplodia_avicenniae_2 -ATCGAAAAATTTGAGAAG-----TTCGTGATTC---CCAACCCT-GTTTCCCGGCCC-CGC-T--------------TGGCTCTGTAGTGCTGCGGCGCACAGTCCGCCGTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAACGAAAAATGCTCTGACCACTCATGTAC---TGTCGTACGAGCAAAGGCTAACGTGCTCCACTACAGGGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACCCCGAAGTACTATGTCACCGTCATCGACGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCGCA- Lasiodiplodia_brasiliensis --------------------------------------------------TTTTACCC-CTC-TCGACTT--------CGGCGCTGCGGCGCTGCGGCGCACAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGTGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAT---CGTCGTACGAGCAATGGCTAACGCGCCCCACTACA-GGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_brasiliensis_2 CATTGAGAAGTTCGAGAAGGTCCGTGCACGCAT---------GTC-GTTTTTTAACCC-CTC-TCGACTT--------CGGCGCTGCGGCGCTGCGGCGCACAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGTGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAT---CGTCGTACGAGCAATGGCTAACGCGCCCCACTACA-GGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACCCCGAAGTACTATGTCACCGTCATCGACGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCGCA- Lasiodiplodia_brasiliensis_3 CATTGAGAAGTTCGAGAAGGTCCGTGCACGCAT---------GTC-GTTTTTTAACCC-CTC-TCGACTT--------CGGCGCTGCGGCGCTGCGGCGCACAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGTGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAT---CGTCGTACGAGCAATGGCTAACGCGCCCCACTACA-GGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACCCCGAAGTACTATGTCACCGTCATCGACGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCGCA- Lasiodiplodia_bruguierae -ATTGAGAAATTCGAGAAGGTCCGTGCACGCAT---------GTT-TTCTTTTAACCCACTC-TCGACTT----------------CAGCGCTGCGGCGCGCAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACGCGCCCCACTACA-GGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACCCCGAAGTACTATGTCACCGTCATCGACGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCGCA- Lasiodiplodia_bruguierae_2 -ATTGAGAAATTCGAGAAGGTCCGTGCACGCAT---------GTT-TTCTTTTAACCCACTC-TCGACTT----------------CAGCGCTGCGGCGCGCAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACGCGCCCCACTACA-GGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACCCCGAAGTACTATGTCACCGTCATCGACGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCGCA- Lasiodiplodia_caatinguensis ------GAAGTTCGAGAAGGTCCGTGCACGCAT---------GTC-GTTTTTTTACCC-CTC-TCGACTT--------TGGCGCTGCGGCGCTGCGGCGCATAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGACTAACGCGCCCCACTACA-GGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_caatinguensis_2 ------GAAGTTCGAGAAGGTCCGTGCACGCAT---------GTC-GTTTTTTTACCC-CTC-TCGACTT--------TGGCGCTGCGGCGCTGCGGCGCATAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGACTAACGCGCCCCACTACA-GGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_chinensis CATCGAAAAATTCGAGAAG-----TTCGTGATTT-------CCCC-CCCTCCCAGCCC-CGC-T--------------TGGCTCTGTAGCGCTGCGGCGCACAGTCCGCCTTATCACTCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACACGCCCCACTACAGGGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACCCCGAAGTACTATGTCACCGTCATCGACGCCCCCGGTCACCGTGATTTCATCAAGAACATGATCACTGGTACCTCGCA- Lasiodiplodia_chinensis_2 CATCGAAAAATTCGAGAAG-----TTCGTGATTT-------CCCC-CCCTCCCAGCCC-CGC-T--------------TGGCTCTGTAGCGCTGCGGCGCACAGTCCGCCTTATCACTCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACACGCCCCACTACAGGGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACCCCGAAGTACTATGTCACCGTCATCGACGCCCCCGGTCACCGTGATTTCATCAAGAACATGATCACTGGTACCTCGCA- Lasiodiplodia_chinensis_3 CATCGAAAAATTCGAGAAG-----TTCGTGATTT-------CCCC-CCCTCCCAGCCC-CGC-T--------------TGGCTCTGTAGCGCTGCGGCGCACAGTCCGCCTTATCACTCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACACGCCCCACTACAGGGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACCCCGAAGTACTATGTCACCGTCATCGACGCCCCCGGTCACCGTGATTTCATCAAGAACATGATCACTGGTACCTCGCA- Lasiodiplodia_chinensis_4 CATCGAAAAATTCGAGAAG-----TTCGTGATTT-------CCCC-CCCTCCCAGCCC-CGC-T--------------TGGCTCTGTAGCGCTGCGGCGCACAGTCCGCCTTATCACTCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACACGCCCCACTACAGGGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACCCCGAAGTACTATGTCACCGTCATCGACGCCCCCGGTCACCGTGATTTCATCAAGAACATGATCACTGGTACCTCGCA- Lasiodiplodia_citricola CATCGAGAAGTTCGAGAAG-----TGAGTGAAG----------AT-TTTCCCCAACCC-CGC-T--------------TGGCTCTGCAGCGCTGCGGCGCACAGTCCGCCCTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGGGTTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACGTGCCCCACCACAGGGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_citricola_2 CATCGAGAAGTTCGAGAAG-----TGAGTGAAG----------AT-TTTCCCCAACCC-CGC-T--------------TGGCTCTGCAGCGCTGCGGCGCACAGTCCGCCCTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGGGTTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACGTGCCCCACCACAGGGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_clavispo CATCGAAAAGTTCGAAAAGGTCAGTACTCAAAT-TTTGCCCGGCCAGCACTCAAATTT-TGC-CCGGC------------------CAGCGCTGCGGCGCACAGCCCGGCTTCTCGCTCTGATGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_clavispo_2 CATCGAAAAGTTCGAAAAGGTCAGTACTCAAAT-TTTGCCCGGCCAGCACTCAAATTT-TGC-CCGGC------------------CAGCGCTGCGGCGCACAGCCCGGCTTCTCGCTCTGATGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_crassispora ------GAAGTTCGAGAAGGCAAG-----------------------TTTCCCAATCC-CGC-TTG----------------GTTGCAGCGCTGCGGCGCACAGTCCGCCTTATCGCGTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGTCTCGTCTGGGTTCGGCAAAATCACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCGCTAGCGAAAAATGCTCCGACCACTCATGTAC---CGTCATACGACCAGACGCTAACACGCGCCACTAGA-GGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_crassispora_2 ------GAAGTTCGAGAAGGCAAG-----------------------TTTCCCAATCC-CGC-TTG----------------GTTGCAGCGCTGCGGCGCACAGTCCGCCTTATCGCGTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGTCTCGTCTGGGTTCGGCAAAATCACCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCGCTAGCGAAAAATGCTCCGACCACTCATGTAC---CGTCGTACGACCAGAGGCTAACCCGCCACACTAGA-GGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_curvata CATTGAGAAGTTCGAGAAGGTCCGTGCACGCAT---------GTC-GTTTTTTTACCC-CTC-TCGACTT--------TGGCGCTGCAGCGCTGCGGCGCATAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACGCGCCCCACTACA-GGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_curvata_2 CATTGAGAAGTTCGAGAAGGTCCGTGCACGCAT---------GTC-GTTTTTTTACCC-CTC-TCGACTT--------TGGCGCTGCAGCGCTGCGGCGCATAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACGCGCCCCACTACA-GGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_euphorbicola CATCGAGAAGTTCGAGAAG-----TGAGTGAAG----------AT-TTTCCCCAACCC-CGC-T--------------TGGCTCTGCAGCGCTGCGGCGCACAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCGCTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACGCGCCCCACTACAGGGAAGCCGCTGAGCTCGGCAAGGGATCCTTCAAGTACGCCTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACCCCGAAGTACTATGTCACCGTCATCGACGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCGCA- Lasiodiplodia_euphorbicola_2 ------------------------------------------------TCCCCAACCC-CGC-T--------------TGGCTCTGCAGCGCTGCGGCGCACAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCGCTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACGCGCCCCACTACAGGGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACCCCGAAGTACTATGTCACCGTCATCGACGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCGCA- Lasiodiplodia_euphorbicola_3 CATCGAGAAGTTCGAGAAG-----TGAGTGAAG----------AT-TTTCCCCAACCC-CGC-T--------------TGGCTCTGCAGCGCTGCGGCGCACAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCGCTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACGCGCCCCACTACAGGGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACCCCGAAGTACTATGTCACCGTCATCGACGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCGCA- Lasiodiplodia_exigua_B CATCGAGAAATTCGAGAAGGTCCGTGCACGCAT---------GTC-GTTTTTTTACCC-CTC-TCGACTT----------------CGGCGCTGCGGCGCATAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACGCGCCCCACTACA-GGAAGCCGCTGAGCTCGGCAAGGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_exigua_C CATCGAGAAATTCGAGAAGGTCCGTGCACGCAT---------GTC-GTTTTTTTACCC-CTC-TCGACTT----------------CGGCGCTGCGGCGCATAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACGCGCCCCACTACA-GGAAGCCGCTGAGCTCGGCAAGGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_fujianen AATTGAAAAGTTCGAGAAGGTCCGTGCGCTGTT---------GTC-GTTTTTTCATCC-CTC-TCGCCTT--------CAGCGCTGCGGCGCTGCGGCGCACAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATCACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCATACGAGCAAAGGCTAACGTATCCCACTACA-GGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACCCCGAAGTACTATGTCACCGTCATCGACGCCCCCGGTCACCGTGATTTCATCAAGAACATGATCACTGGTACCTCGCA- Lasiodiplodia_gilanensis CATCGAGAAGTTCGAGAAGGTCCGTGCGCTCAT---------TTT-GTTTTTTAACCC-CGC-TCGGCTT--------CAGCGCTGCAGCGCTGCGGCTCACAGTCCGCCTTATCGCGTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATCACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAGAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACGCGCCCCACTACA-GGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_gilanensis_2 CATCGAGAAGTTCGAGAAGGTCCGTGCGCTCAT---------TTT-GTTTTTTAACCC-CGC-TCGGCTT--------CAGCGCTGCAGCGCTGCGGCTCACAGTCCGCCTTATCGCGTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATCACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAGAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACGCGCCCCACTACA-GGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_gonubien -----------------------------GAAG---------GTCAGTACTCAAATTT-TGC-CCGGC------------------CAGCGCTGCGGCGCACAGTCCGGCTTCTCGCTCTAATGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AAGCTCGTCTGGGTTCGGCAAAATCACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGATGCGCCTCCCCACTAGCGAAGAATGCCCCGACCACTCATGTAC---CGTCGTATGATCACAGGCTAACGCGCGCCATTACA-GGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_gonubiensis_2 -----------------------------GAAG---------GTCAGTACTCAAATTT-TGC-CCGGC------------------CAGCGCTGCGGCGCACAGTCCGGCTTCTCGCTCTAATGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AAGCTCGTCTGGGTTCGGCAAAATCACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGATGCGCCTCCCCACTAGCGAAGAATGCCCCGACCACTCATGTAC---CGTCGTATGATCACAGGCTAACGCGCGCCATTACA-GGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_gravistr CATCGAGAAGTTCGAGAAG-----TGAGTGATT-----------------CCCGACCC-CTC------------------CCTCTGCAGCACTGCGGCGCACAGTCCGCCTTATCGCTTTGATGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGCAC---CGTCGTACGAGCAAAGGCTAAC-CGCCCCACTACAGGGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACCCCGAAGTACTATGTCACCGTCATCGACGCCCCCGGTCACCGTGATTTCATCAAGAACATGATCACTGGTACCTCGCA- Lasiodiplodia_gravistr_2 -------------GAGAAG-----TGAGTGATT-----------------CCCGACCC-CTC------------------CCTCTGCAGCACTGCGGCGCACAGTCCGCCTTATCGCTTTGATGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGATGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGCAC---CGTCGTACGAGCAAAGGCTAAC-CGCCCCACTACAGGGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACCCCGAAGTACTATGTCACCGTCATCGACGCCCCCGGTCACCGTGATTTCATCAAGAACATGATCACTGGTACCTCGCA- Lasiodiplodia_henanica GATCGAGAAGTTCGAAAAG-----TCAGTGAAG---------TTT-TTTCCCCAACCC-CGC-T--------------TGGCTCTGCAGCGCTGCGGCGCACAGTCCGCCTTATCGCCTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACACGCCCCACTACAGGGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACCCCGAAGTACTATGTCACCGTCATCGACGCCCCCGGTCACCGTGATTTCATCAAGAACATGATCACTGGTACCTCGCA- Lasiodiplodia_hormozganensis CATCGAGAAGTTCGAGAAG-----TGAGTGAAG----------AT-TTTCTCCAACCC-CGCTT--------------TGGCTCTGCAGCGCTGCGGCGCACAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACACGCCCCACTACAGGGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_hormozganensis_2 CATCGAGAAGTTCGAGAAG-----TGAGTGAAG----------AT-TTTCTCCAACCC-CGCTT--------------TGGCTCTGCAGCGCTGCGGCGCACAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACACGCCCCACTACAGGGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_iraniens CATCGAGAAGTTCGAGAAGGTCCGTGCGATGTT---------GTC-GTTTTTTCATCC-CTC-TCGCCTT--------CAGCGCTGCGGCGCAGCGGCGCACAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATCACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCATACGAGCAAAGGCTAACGTATCCCACTACA-GGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_iraniens_2 CATCGAGAAGTTCGAGAAGGTCCGTGCGATGTT---------GTC-GTTTTTTCATCC-CTC-TCGCCTT--------CAGCGCTGCGGCGCAGCGGCGCACAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGTCTCGTCTGGGTTCGGCAAAATCACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCATACGAGCAAAGGCTAACGTATCCCACTACA-GGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_iraniens_3 TATTGAGAAGTTCGAGAAGGTCCGTGCGATGTT---------GTC-GTTTTTTCATCC-CTC-TCGCCTT--------CAGCGCTGCGGCGCAGCGGCGCACAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATCACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCATACGAGCAAAGGCTAACGTATCCCACTACA-GGAAGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_iraniens_4 TATTGAGAAGTTCGAGAAGGTCCGTGCGATGTT---------GTC-GTTTTTTCATCC-CTC-TCGCCTT--------CAGCGCTGCGGCGCAGCGGCGCACAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATCACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCATACGAGCAAAGGCTAACGTATCCCACTACA-GGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACCCCGAAGTACTATGTCACCGTCATCGACGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCGCA- Lasiodiplodia_iraniens_5 TATTGAGAAGTTCGAGAAGGTCCGTGCGATGTT---------GTC-GTTTTTTCATCC-CTC-TCGCCTT--------CAGCGCTGCGGCGCAGCGGCGCACAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATCACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCATACGAGCAAAGGCTAACGTATCCCACTACA-GGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACCCCGAAGTACTATGTCACCGTCATCGACGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCGCA- Lasiodiplodia_irregula -------AATTTCGAGAAGGTCCGTGCACGCAT---------GTC-GTTTTTTTACCC-CTC-TCGACTT----------------CGGCGCTGCGGCGCATAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACGCGCCCCACTACA-GGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_laeliocattleyae --------------------------------------------------CCCAACCC-CGC-T--------------TGGCTCTGCAGCGCTGCGGCGCACAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCATGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGACGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CATCGTACGAGCAAAGGCTAACGTGCCCCACTACAGGGAAGCCGCTGAGCTCGGCAAGGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Lasiodiplodia_laeliocattleyae_2 --------------------------------------------------CCCAACCC-CGC-T--------------TGGCTCTGCAGCGCTGCGGCGCACAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCATGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACGTGCCCCACTACAGGGAAGCCGCTGAGCTCGGCAAGGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Lasiodiplodia_laosensi CATTGAGAAGTTCGAGAAGGTCCGTGCACGCAT---------GTC-GTTTTTTAACCC-CTC-TCGACTT--------CGGCGCTGCAGCGCTGCGGCGCACAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACGCGCCCCACTACA-GGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_laosensi_2 CATTGAGAAGTTCGAGAAGGTCCGTGCACGCAT---------GTC-GTTTTTTAACCC-CTC-TCGACTT--------CGGCGCTGCAGCGCTGCGGCGCACAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACGCGCCCCACTACA-GGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_lignicola CATCGAAAAATTCGAGAAG-----TTCGTGATTT-------CCCC-CCCTCCCAGCCC-CGC-T--------------TGGCTCTGTAGCGCTGCGGCGCACAGTCCGCCTTATCACTCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGTCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACACGCCCCACTACAGGGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACCCCGAAGTACTATGTCACCGTCATCGACGCCCCCGGTCACCGTGATTTCATCAAGAACATGATCACTGGTACCTCGCA- Lasiodiplodia_macrocon -------------------------------------------------TTTTTACCC-CTC-TCGACTT--------TGGCGCTGCGGCGCTGCGGCGCATAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGACTAACGCGCCCCACTACA-GGAAGCCGCTGAGCTCGGTAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_macrospo GATCGAAAAATTTGAGAAG-----TTCGTGATT-----------------CCCAACCCCCTC------------------CCTCTGCAGCGCTGCGGCGCACAGTCCGCCTTATCGCTTTGATGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG--TTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAAGCTAAT-CGCCCCACTACAGGGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACCCCGAAGTACTATGTCACCGTCATCGACGCCCCCGGTCACCGTGATTTCATCAAGAACATGATCACTGGTACCTCGCA- Lasiodiplodia_mahajangana CATTGAGAAATTCGAGAAGGTCCGTGCACGCAT---------GTG-GTTTTTTTACCC-CTC-TCGACTT----------------CGGCGCTGCGGCGCATAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACGCGCCCCACTACA-GGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACCCCGAAGTACTATGTCACCGTCATCGACGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCGCA- Lasiodiplodia_mahajangana_2 CATTGAGAAATTCGAGAAGGTCCGTGCACGCAT---------GTG-GTTTTTTTACCC-CTC-TCGACTT----------------CGGCGCTGCGGCGCATAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACGCGCCCCACTACA-GGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACCCCGAAGTACTATGTCACCGTCATCGACGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCGCA- Lasiodiplodia_margaritacea ------GAAGTTCGAGAAGGTAAGAA----------------GAT-TTTTCACAACCC-CGC-TCG----------------GGCGCAGCGCTGCGGCGCACAGTCCGCCTTATCGCTCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATCACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAGAAATGTTCCGACCACTCATGTAC---CGTCGTACGACCACAGGCTAACGCGCCCCACTACA-GGAAGCCGCTGAGCTCGGTAAGGGTTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_margaritacea_2 ------GAAGTTCGAGAAGGTAAGAA----------------GAT-TTTTCACAACCC-CGC-TCG----------------GGCGCAGCGCTGCGGCGCACAGTCCGCCTTATCGCTCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATCACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAGAAATGTTCCGACCACTCATGTAC---CGTCGTACGACCACAGGCTAACGCGTGCCACTACA-GGAAGCCGCTGAGCTCGGCAAGGGTTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_mediterranea TATCGAAAAATTCGAGAAG-----TTAGTTTTT---------CCC-ATCCCCCAACCC-CGC-T--------------TGGCTCTGCAGCGCTGCGGCGCACAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACACGCCCCACTACAGGGAAGCCGCTGAGCTCGGTAAGGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_mediterranea_2 TATCGAAAAATTCGAGAAG-----TTAGTTTTT---------CCC-ATCCCCCAACCC-CGC-T--------------TGGCTCTGCAGCGCTGCGGCGCACAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACACGCCCCACTACAGGGAAGCCGCTGAGCTCGGCAAGGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_microcon ----------TTCGAGAAG-----TTCGTGATTT-------CCCC-CCCTCCCAGCCC-CGC-T--------------TGGCTCTGTAGCGCTGCGGCGCACAGTCCGCCTTATCGCTCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACACGCCCCACCACAGGGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_missouriana --------------------TCCGTGCGCTCAT---------TTT-GTTTTTTAACCC-CGC-TCGGCTT--------CAGCGCTGCAGCGCTGCGGCTCACAGTCCGCCTTATCGCGTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATCACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGAGGCGCCTCCCCACTAGCGAGAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACGCGCCCCACTACA-GGAAGCCGCTGAGCTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_missouriana_2 --------------------TCCGTGCGCTCAT---------TTT-GTTTTTTAACCC-CGC-TCGGCTT--------CAGCGCTGCAGCGCTGCGGCTCACAGTCCGCCTTATCGCGTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATCACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGAGGCGCCTCCCCACTAGCGAGAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACGCGCCCCACTACA-GGAAGCCGCTGAGCTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_nanpinge CATTGAGAAGTTCGAGAAGGTCCGTGCACGCAT---------GTC-GTTTTTTTACCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_nanpinge_2 CATTGAGAAGTTCGAGAAGGTCCGTGCACGCAT---------GTC-GTTTTTTTACCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_paraphys CATCGAGAAGTTCGAGAAG-----TGAGTGAAG----------AT-TTTCCCCAACCC-CGC-T--------------TGGCTCTGCAGCGCTGCGGCGCACAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATACTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACGTGCCCCACCACAGGGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACCCCGAAGTACTATGTCACCGTCATCGACGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCGCA- Lasiodiplodia_paraphys_2 -------------------------GAGTGAAG----------AT-TTTCCCCAACCC-CGC-T--------------TGGCTCTGCAGCGCTGCGGCGCACAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATACTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACGTGCCCCACCACAGGGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACCCCGAAGTACTATGTCACCGTCATCGACGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCGCA- Lasiodiplodia_paraphys_3 CATCGAGA-GTTCGAGAAG-----TGAGTGAAG----------AT-TTTCCCCAACCC-CGC-T--------------TGGCTCTGCAGCGCTGCGGCGCACAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATACTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACGTGCCCCACCACAGGGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACCCCGAAGTACTATGTCACCGTCATCGACGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCGCA- Lasiodiplodia_parva_CB CATCGAGAAGTTCGAGAAG-----TGAGTGAAG----------AT-TTTCCCCAACCC-CGC-C--------------TGGCTCTGCAGCGCTGCGGCGCACAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACGTGCCCCACCACAGGGAAGCCGCTGAGCTCGGTAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_parva_CB_2 CATCGAGAAGTTCGAGAAG-----TGAGTGAAG----------AT-TTTCCCCAACCC-CGC-C--------------TGGCTCTGCAGCGCTGCGGCGCACAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACGTGCCCCACCACAGGGAAGCCGCTGAGCTCGGTAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_plurivora ------GAAGTTCGAGAAGGTCAGTTTTCTCAT---------TTT-GTTTTTTAACCC-CGC-TCGGCTT--------CAGCGCTGCGGCGCTGCGGCGCACAGTCCGCCTTATCGCCTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATCACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTTCCCACTAGCGAGAAATGCTCTGACCACTCATGTACCGTCGTCGTACGAGCAAAGGCTAACACCGCCC--CACA-GGAAGCCGCTGAGCTCGGTAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_plurivora_2 ------GAAGTTCGAGAAGGTCAGTTTTCTCAT---------TTT-GTTTTTTAACCC-CGC-TCGGCTT--------CAGCGCTGCGGCGCTGCGGCGCACAGTCCGCCTTATCGCCTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATCACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTTCCCACTAGCGAGAAATGCTCTGACCACTCATGTACCGTCGTCATACGAGCAAAGGCTAACACCGCCC--CACA-GGAAGCCGCTGAGCTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_pontae_C ------GAAATTTGAGAAGGCACGTGATCCCGC---------CCT-GTTTTTTAACCC-CGC-TCGGCCT--------CAACGTTGCGGCGCTGCGGCGCACAATCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGCAC---CATCGTACGAGCAAAGGCTAACGCGCCCCACTACA-GGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_pseudotheobromae ----------TTCGAGAAG-----TTCGTGATTT-------CCCC-CCCTCCCAACCC-CGC-T--------------TGGCTCTGTAGCGCTGCGGCGCACAGTCCGCCTTATCGCTCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGGCCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACACGCCCCACTACAGGGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_pseudotheobromae_2 ----------TTCGAGAAG-----TTCGTGATTT-------CCCC-CCCTCCCAACCC-CGC-T--------------TGGCTCTGTAGCGCTGCGGCGCACAGTCCGCCTTATCGCTCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGGCCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACACGCCCCACTACAGGGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_pseudotheobromae_3 CATCGAAAAATTCGAGAAG-----TTCGTGATTT-------CCCC-CCCTCCCAACCC-CGC-T--------------TGGCTCTGTAGCGCTGCGGCGCACAGTCCGCCTTATCGCTCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGGCCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACACGCCCCACTACAGGGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACCCCGAAGTACTATGTCACCGTCATCGACGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCGCA- Lasiodiplodia_pseudotheobromae_3.2 ------------------------TTCGTGATTT-------CCCC-CCCTCCCAACCC-CGC-T--------------TGGCTCTGTAGCGCTGCGGCGCACAGTCCGCCTTATCGCTCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGGCCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACACGCCCCACTACAGGGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_pseudotheobromae_4 ----------TTCGAGAAG-----TTCGTGATTT-------CCCC-CCCTCCCAACCC-CGC-T--------------TGGCTCTGTAGCGCTGCGGCGCACAGTCCGCCTTATCGCTCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGGCCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACACGCCCCACTACAGGGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_pseudotheobromae_5 ----------TTCGAGAAG-----TTCGTGATTT-------CCCC-CCCTCCCAACCC-CGC-T--------------TGGCTCTGTAGCGCTGCGGCGCACAGTCCGCCTTATCGCTCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGGCCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACACGCCCCACTACAGGGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_pseudotheobromae_6 ----------TTCGAGAAG-----TTCGTGATTT-------CCCC-CCCTCCCAACCC-CGC-T--------------TGGCTCTGTAGCGCTGCGGCGCACAGTCCGCCTTATCGCTCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGGCCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACACGCCCCACTACAGGGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_pseudotheobromae_C CATCGAAAAATTCGAGAAG-----TTCGTGATTT-------CCCC-CCCTCCCAACCC-CGC-T--------------TGGCTCTGTAGCGCTGCGGCGCACAGTCCGCCTTATCGCTCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGGCCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACACGCCCCACTACAGGGAAGCCGCTGAGCTCGGTAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_pyriformis ----GAGAAGTTCGAGAAGGCAAG-----------------------TTTCCCAATCC-CGC-TTG----------------GTTGCAGCGCTGCGGCGCACAGTCCGCCTTATCGCGTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGTCTCGTCTGGGTTCGGCAAAATCACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCGCTAGCGAAAAATGCTCCGACCACTCATGTAC---CGTCGTACGACCAGAGGCTAACACGCGCCACTACA-GGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_pyriformis_2 ----GAGAAGTTCGAGAAGGCAAG-----------------------TTTCCCAATCC-CGC-TTG----------------GTTGCAGCGCTGCGGCGCACAGTCCGCCTTATCGCGTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGTCTCGTCTGGGTTCGGCAAAATCACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCGCTAGCGAAAAATGCTCCGACCACTCATGTAC---CGTCGTACGACCAGAGGCTAACACGCGCCACTACA-GGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_rubropurpurea ------GAAGTT------------------------------CGT-CTTTCCCAGCCC-CGC-TCT----------------GCTGTTGCGCTGCGGCGCACAGTCCGCCTTATCGC--TGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGTCTCGTCTGGGTTCGGCAAAATCACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAGAATGCCCCGACCAGTCATGTAC---CGTCTCATGATCACAGGCTAACGCGTGCCACAACA-GGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_rubropurpurea_2 ------GAAGTT------------------------------CGT-CTTTCCCAGCCC-CGC-TCT----------------GCTGTTGCGCTGCGGCGCACAGTCCGCCTTATCGC--TGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGTCTCGTCTGGGTTCGGCAAAATCACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAGAATGCCCCGACCAGTCATGTAC---CGTCTCATGATCACAGGCTAACGCGTGCCACAACA-GGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_sterculiae --------------------------------------------------CCCAGCCC-CGC-T--------------TGGCTCTGTAGCGCTGCGGCGCACAGTCCGCCTTATCACTCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACACGCCCCACTACA-GGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_subglobosa CATCGAGAAGTTCGAGAAG-----TGAGTGATT-----------------CCCGACCC-CTC------------------CCTCAGCAGCGCTGCGGCGCACAGTCCGCCTTATCGCTTTGATGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATCACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAAC-CGCCCCACTACAGGGAAGCCGCTGAGCTCGGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_subglobosa_2 CATCGAGAAGTTCGAGAAG-----TGAGTGATT-----------------CCCGACCC-CTC------------------CCTCAGCAGCGCTGCGGCGCACAGTCCGCCTTATCGCTTTGATGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATCACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAAC-CGCCCCACTACAGGGAAGCCGCTGAGCTCGGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_tenuicon ------------------------TTCGTGATTT-------CCCC-CCCTCCCAGCCC-CGC-T--------------TGGCTCTGTAGCGCTGCGGCGCACAGTCCGCCTTATCACTCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACACGCCCCACTACAGGGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_thailandica -----------TCGAGAAGGTCCGTGAGCTGTT---------GTC-GTTTTTTCATCC-CTC-TCGCCTTCAGCGCTGCAGCGCTGCGGCGTTGCGGCGCACAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCTCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCATACGAGCAAAGGCTAACGTATTCCACTACA-GGAAGCCGCTGAGCTCGGCAAGGGTTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_thailandica_2 --TCGAGAAGTTCGAGAAGGTCCGTGAGCTGTT---------GTC-GTTTTTTCATCC-CTC-TCGCCTTCAGCGCTGCAGCGCTGCGGCGTTGCGGCGCACAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCTCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCATACGAGCAAAGGCTAACGTATTCCACTACA-GGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCGAGACCCCGAAGTACTATGTCACCGTCATCGACGCCCCCGGTCACCGTGATTTCATCAAGAACATGATCACTGGTACCTCCCA- Lasiodiplodia_theobromae CATCGAGAAGTTCGAGAAGGTCCGTGCACGCAT---------GTC-GTTTTTTAACCC-CTC-TCGACTT--------CGGCGCTGCAGCGCTGCGGCGCACAGTCCGCCTTATCGCTCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACGCGCCCCACTACA-GGAAGCCGCTGAGCTCGGTAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_theobromae_2 CATCGAGAAGTTCGAGAAGGTCCGTGCACGCAT---------GTC-GTTTTTTAACCC-CTC-TCGACTT--------CGGCGCTGCAGCGCTGCGGCGCACAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACGCGCCCCACTACA-GGAAGCCGCTGAGCTCGGTAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_tropica ----------TTCGAGAAG-----TTCGTGATTT-------CCCC-CCCTCCCAGCCC-CGC-T--------------TGGCTCTGTAGCGCTGCGGCGCACAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACACGCCCCACCACAGGGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_venezuel ------GAAGTTCGAGAGT-----------------------AAG-CCATTCCAACCC-CGC-T-----------------TGCTGCAGCGCTGCGGCGCACAGTCCGTCTTATCGCTCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCACGCGCT-AGCCTCGTCTGGGTTCGGCAAAATCACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACACGCCTCCCCACTAGCGAAAAATGCTCCGACCACTCATGTAC---CGTCATACGATCATACGCTAACGCCCGCCGATAGA-GGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_venezuel_2 ------GAAGTTCGAGAGT-----------------------AAG-CCATTCCAACCC-CGC-T-----------------TGCTGCAGCGCTGCGGCGCACAGTCCGTCTTATCGCTCTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCACGCGCT-AGCCTCGTCTGGGTTCGGCAAAATCACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACACGCCTCCCCACTAGCGAAAAATGCTCCGACCACTCATGTAC---CGTCATACGATCATACGCTAACGCCCGCCGATAGA-GGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_viticola --------------------TCCGTGCACGCAT---------GTC-GTTTTTTAACCC-CTC-TCGACTT--------CGGCGCTGCGGCGCTGCGGCGCACAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGTGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAT---CGTCGTACGAGCAATGGCTAACGCGCCCCACTACA-GGAAGCCGCTGAGCTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_viticola_2 --------------------TCCGTGCACGCAT---------GTC-GTTTTTTAACCC-CTC-TCGACTT--------CGGCGCTGCGGCGCTGCGGCGCACAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGTGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAT---CGTCGTACGAGCAATGGCTAACGCGCCCCACTACA-GGAAGCCGCTGAGCTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Lasiodiplodia_vitis_CB --------------------------------------------------CCCAACCC-CGC-T--------------TGGCTCTGCAGCGCTGCGGCGCACAGTCCGCCTTATCGCTTTGGTGAGGGGCATTTTTCGTGGTGGGGTTTGGCCCGCGCT-AGCCTCGTCTGGGTTCGGCAAAATGACCGCACTTGG-TTTTTTTGCGACCGGCGTCTGGCCGACGCGCCTCCCCACTAGCGAAAAATGCTCTGACCACTCATGTAC---CGTCGTACGAGCAAAGGCTAACACGCCCCACTACA-GGAAGCCGCTGAGCTCGGCAAGGGTTCCTTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------- ; END; BEGIN TREES; TITLE Lasiodiplodia_NJ; LINK TAXA = Taxa1; TRANSLATE 1 Diplodia_mutila_C, 2 Diplodia_seriata, 3 Lasiodiplodia_aquilari, 4 Lasiodiplodia_avicenniae, 5 Lasiodiplodia_avicenniae_2, 6 Lasiodiplodia_brasiliensis, 7 Lasiodiplodia_brasiliensis_2, 8 Lasiodiplodia_brasiliensis_3, 9 Lasiodiplodia_bruguierae, 10 Lasiodiplodia_bruguierae_2, 11 Lasiodiplodia_caatinguensis, 12 Lasiodiplodia_caatinguensis_2, 13 Lasiodiplodia_chinensis, 14 Lasiodiplodia_chinensis_2, 15 Lasiodiplodia_chinensis_3, 16 Lasiodiplodia_chinensis_4, 17 Lasiodiplodia_citricola, 18 Lasiodiplodia_citricola_2, 19 Lasiodiplodia_clavispo, 20 Lasiodiplodia_clavispo_2, 21 Lasiodiplodia_crassispora, 22 Lasiodiplodia_crassispora_2, 23 Lasiodiplodia_curvata, 24 Lasiodiplodia_curvata_2, 25 Lasiodiplodia_euphorbicola, 26 Lasiodiplodia_euphorbicola_2, 27 Lasiodiplodia_euphorbicola_3, 28 Lasiodiplodia_exigua_B, 29 Lasiodiplodia_exigua_C, 30 Lasiodiplodia_fujianen, 31 Lasiodiplodia_gilanensis, 32 Lasiodiplodia_gilanensis_2, 33 Lasiodiplodia_gonubien, 34 Lasiodiplodia_gonubiensis_2, 35 Lasiodiplodia_gravistr, 36 Lasiodiplodia_gravistr_2, 37 Lasiodiplodia_henanica, 38 Lasiodiplodia_hormozganensis, 39 Lasiodiplodia_hormozganensis_2, 40 Lasiodiplodia_iraniens, 41 Lasiodiplodia_iraniens_2, 42 Lasiodiplodia_iraniens_3, 43 Lasiodiplodia_iraniens_4, 44 Lasiodiplodia_iraniens_5, 45 Lasiodiplodia_irregula, 46 Lasiodiplodia_laeliocattleyae, 47 Lasiodiplodia_laeliocattleyae_2, 48 Lasiodiplodia_laosensi, 49 Lasiodiplodia_laosensi_2, 50 Lasiodiplodia_lignicola, 51 Lasiodiplodia_macrocon, 52 Lasiodiplodia_macrospo, 53 Lasiodiplodia_mahajangana, 54 Lasiodiplodia_mahajangana_2, 55 Lasiodiplodia_margaritacea, 56 Lasiodiplodia_margaritacea_2, 57 Lasiodiplodia_mediterranea, 58 Lasiodiplodia_mediterranea_2, 59 Lasiodiplodia_microcon, 60 Lasiodiplodia_missouriana, 61 Lasiodiplodia_missouriana_2, 62 Lasiodiplodia_nanpinge, 63 Lasiodiplodia_nanpinge_2, 64 Lasiodiplodia_paraphys, 65 Lasiodiplodia_paraphys_2, 66 Lasiodiplodia_paraphys_3, 67 Lasiodiplodia_parva_CB, 68 Lasiodiplodia_parva_CB_2, 69 Lasiodiplodia_plurivora, 70 Lasiodiplodia_plurivora_2, 71 Lasiodiplodia_pontae_C, 72 Lasiodiplodia_pseudotheobromae, 73 Lasiodiplodia_pseudotheobromae_2, 74 Lasiodiplodia_pseudotheobromae_3, 75 Lasiodiplodia_pseudotheobromae_3.2, 76 Lasiodiplodia_pseudotheobromae_4, 77 Lasiodiplodia_pseudotheobromae_5, 78 Lasiodiplodia_pseudotheobromae_6, 79 Lasiodiplodia_pseudotheobromae_C, 80 Lasiodiplodia_pyriformis, 81 Lasiodiplodia_pyriformis_2, 82 Lasiodiplodia_rubropurpurea, 83 Lasiodiplodia_rubropurpurea_2, 84 Lasiodiplodia_sterculiae, 85 Lasiodiplodia_subglobosa, 86 Lasiodiplodia_subglobosa_2, 87 Lasiodiplodia_tenuicon, 88 Lasiodiplodia_thailandica, 89 Lasiodiplodia_thailandica_2, 90 Lasiodiplodia_theobromae, 91 Lasiodiplodia_theobromae_2, 92 Lasiodiplodia_tropica, 93 Lasiodiplodia_venezuel, 94 Lasiodiplodia_venezuel_2, 95 Lasiodiplodia_viticola, 96 Lasiodiplodia_viticola_2, 97 Lasiodiplodia_vitis_CB; TREE PAUP_1 = [&R] ((1:0.089183,2:0.030316):0.056768,((55:0.006733,56:0.004172):0.017061,(((82:0.0,83:0.0):0.082238,((93:0.0,94:0.0):0.09213,(34:0.0,(33:0.0,(19:0.0,20:0.0):0.05095):0.0):0.138777):0.004053):0.004372,((22:0.017356,(21:0.012622,(80:0.0,81:0.0):0.0):0.0):0.039734,(((51:0.020999,71:0.069261):0.003108,((((69:0.0,70:0.003073):0.039763,(32:0.0,(31:0.0,(60:0.0,61:0.0):0.003269):0.0):0.006479):0.015603,((88:0.0,89:0.0):0.017801,(30:0.004465,(44:0.0,((40:0.0,41:0.002897):0.005819,(42:0.0,43:0.0):0.0):0.0):0.007882):0.0):0.032767):0.010147,((9:0.0,10:0.0):0.010782,(((48:0.0,49:0.0):0.0,(90:0.002924,91:0.0):0.005875):0.0,((6:0.004103,(8:0.0,(7:0.0,(95:0.0,96:0.0):0.0):0.0):0.0):0.007522,(54:0.0,(53:0.0,(29:0.0,(28:0.0,(45:0.003256,(24:0.0,(23:0.0,(12:0.0,(11:0.0,(62:0.0,63:0.0):0.0):0.0):0.006107):0.0):0.009952):0.0):0.0):0.006646):0.0):0.011089):0.002152):0.002253):0.001801):0.007675):0.026983,(((35:0.0,36:0.0):0.009539,(85:0.0,86:0.0):0.01147):0.016377,((26:0.003129,(37:0.019748,((3:0.00639,(38:0.0,39:0.0):0.003137):0.003162,((25:0.002536,27:0.0):0.002528,((65:0.0,(64:0.0,66:0.0):0.0):0.00253,((17:0.0,18:0.0):0.003151,(67:0.0,68:0.0):0.006332):0.0):0.005083):0.0):0.0):0.0):0.005488,((46:0.008655,47:0.0):0.008669,((97:0.0,(57:0.003091,58:0.0):6.62408E-6):0.016044,((52:0.021423,(4:0.0,5:0.0):0.034331):0.003857,((16:0.0,((14:0.0,(13:0.0,50:0.002448):0.0):0.0,(15:0.0,(84:0.0,87:0.0):0.0):0.0):0.0):0.005055,((59:0.0,92:0.003225):0.004241,(74:0.0,(79:0.00303,(72:0.0,(73:0.0,(76:0.0,(77:0.0,(78:0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.00481):0.0):0.011932):0.004946):0.025067):0.0):0.0):0.008013):0.028901):0.003805):0.010986):0.056768); END;