#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on April 19, 2024; 5:45 GMT

TreeBASE (cc) 1994-2008

Study reference:
Masumoto H., & Degawa Y. 2020. Multiclavula petricola sp. nov. (Cantharellales, Basidiomycota),
a new clavarioid and lichenized fungus growing on rocks. Mycoscience,
61(4): 155-159.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S25585]

BEGIN TAXA;
        TITLE  Taxa1;
        DIMENSIONS NTAX=14;
        TAXLABELS
            Clavulina_caespitosa_DQ056371
            Clavulina_cinerea_AY456339
            Hydnum_albidum_MH379883
            Hydnum_subconnatum_MH379930
            Multiclavula_corynoides_U66440
            Multiclavula_ichthyiformis_DQ492694
            Multiclavula_mucida_DQ521417
            Multiclavula_mucida_EU909345
            Multiclavula_mucida_KM248921
            'Multiclavula petricola H_Masumoro_356_holotype'
            'Multiclavula petricola NBRC_XXXXX_ex_type'
            Multiclavula_vernalis_U66439
            Sistotrema_brinkmanii_AY781270
            Sistotrema_raduloides_KF218969
            ;
END;

BEGIN CHARACTERS;
[! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M57491]

	TITLE Multiclavula_ITS_v191227_petricola;
	LINK TAXA = Taxa1;
	DIMENSIONS NCHAR=441;
	FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -;

MATRIX
[                                                          10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440 ]
[                                                           .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         . ]
Clavulina_caespitosa_DQ056371                      GGGGTTTGATGCTGGTGCATGTGCTTGCCCCGACAATTTCAACACCTGTGCACGCTGGTGGGGGTCTCCTCCGCTTACAATAATGAACGTATTGTGCCCGCAAGGCTACTTATTACAACTTTTAACAACGGATCTCTTGGCTCTCGCATCGGAGGACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCCTGGTATTCCGGGGAGCACGCCTGTTCGAGTGTCACGAAATTCTCAAGCTGATGATGATCATCATCTTGGTTTTGGGCTTTGCCGTTTTGGGAGGCTGGCCTTAAAAGTATTAGCTGATCCTGTGTGGACTGGTTCTACTCAGCGTGATAATAATCGATCGTGAGGACATCTTTTGGGATGGCCGGTATCAATTGGGTTGCTCATAGTC
Clavulina_cinerea_AY456339                         TGGGGTTGATGCTGGTGCATGTGCTCGCCCTGACAATTTCAACACCTGTGCACATTTTGGCGATTTTCTTGCGCTGTCAATGTTGAACGTCTTTGTGCCGCAAGGCTTAATAATACAACTTTTAACAACGGATCTCTTGGCTCTCGCATCGGAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCCTGGTATTCCGGGGAGCACGCCTGTTCGAGTGTCATTAAATTCTCAAGCTGATGGTTTTTGTCTCCTTGGTTTTGGGCTTTGCCGTATTGGGAGGCTGGCCTTAAAAGCATTAGCTGATCCTTTGCGGACTGGTTCTACTCAGCGTGATAATAGTCGATCGTGAGGACATCTTTTGGGATGGCCAGTCCTCATTGGGTTGCTTATAGAC
Hydnum_albidum_MH379883                            GAGGGTTGATGCTGGTGCATGTGCTCGCTCTTCTGATTTATACACCTGTGCACTCCTTTGGGGCTTATAAACCTTGTGAACAGTGAATGTTTGTCTGCCATAAGGCAAATTAATACAACTTTTAACAACGGATCTCTTGGCTCTCGCATCGGAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTCTGGTATTCCGGGGAGCACACCTGTTCGAGTGTCATTGAACTCTCAAACAGGTAGTTGCTGCTGGTTTGGATCTGGACTCTGCTGCATTCATGGGCTAGTCTTAAATGTATTAGCTGGTCCTCTGAGGTTTGGTTCTACTCGGCGTGATAATTATCTAACGTGAGGACGGTCTCAGGACTGGCCATGCTCTCTTGGATTGCTTCTAAAT
Hydnum_subconnatum_MH379930                        GAGGGTTGATGCTGGTACATGTGCTCACTCTTCTGATTTATACACCTGTGCACTCCTTTGGAGCTTAATAGCCCTATGAGTAATGGATGTTTATGTGCCACAAGGCAATTTAATACAACTTTTAACAACGGATCTCTTGGCTCTCGCATCGGAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCTCTGGTATTCCGGGGAGCACACCTGTTCGAGTGTCATTAAGCTATCAAATGGGTGTTTTCAGTCAGTTTGGATTTGGGCTTTGCTGCATTAATGGGCTAGTCTTAAATATATTAGCTGGTCCTTTGAGGTTTGGTTCTACTCAGCGTGATAATTATCTAACGTGAGGACAGTTTCAGAACTGGCCATACTCTCTTGGATTGCTTCTAAAC
Multiclavula_corynoides_U66440                     GGAAGCTGATGCCTGGGCGTGTGCTCGCTTCCTGCAAATCTACACCTGTGCACAGAAAGGGATCCTGAACGCTCTTGAAATCTTGAACGTCCGCGAGCCGCAAGGCTAATCAATACAACTTTTAACAACGGATCTCTTGGCTCTCGCATCGGAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATTTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCACGCCTGTTCGAGTGTCGTGAAGCTCTCAAGCTGGTCGTTATTGTCGGCTTGGACGTGGACTCTGACGTAAGAGAAGACTGGTCTAAAATACATTAGCTGACCCTTTGTGGTTCGGTTCTACTCGACGTGATAAATATCTATCGCGAGGACATCCCCAGGGATGGCCGGACTCGCCCGGGACGCTTCTAATC
Multiclavula_ichthyiformis_DQ492694                GGAAGTTGACGCCGGGGCATGTGCTCACTTTCTACAAATCTACACCTGTGCACACTGTTGAGGCTCTGAACCTCTTGAAACCTTGAACGTTATTGTGCCGAAAGGCTAACTCATACAACTTTTAACAACGGATCTCTTGGCTCTCGCATCGGAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCACGCCTGTTCGAGTGTTATGAAGCTCTCAAGCTGATTATTATTGTAAGCTTGGATTTGGACTTTGGAGTCAGATAGCCCTGGTCTTAAATACATTAGCTGACCCTCTGTGGATCGGTTCTACTCGACGTGATAAGTATCAATCGTGAGGACATTCTTAGGGATGGCCGGGATCACCAGGGACGCTTACAATT
Multiclavula_mucida_DQ521417                       GGAAGCTGATGCCTGGGCGTGTGCTCGCTTCCTGCAAATCTACACCTGTGCACAGAAACGGATCCTGAACGCTCTTGAAATCTTGAACGTCCGCGAGCCGTAAGGCTAATCAATACAACTTTTAACAACGGATCTCTTGGCTCTCGCATCGGAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCACGCCTGTTCGAGTGTCGTGAAGCTATCAAGCTGGTTGTTATTGTCAGCTTGGATATGGACCTTGACGTAAGAGAAGACTGGTCCGAAATGCATTAGCTGACCCTTTGTGGTTCGGTTCTACTCGACGTGATAAATATCGATCGCGAGGACATCTCCAGGGATGGCCGGATTTGCCTGGGACGCTCCTAATC
Multiclavula_mucida_EU909345                       GGAAGCTGATGCCTGGGCGTGTGCTCGCTTCCTGCAAATCTACACCTGTGCACAGAAACGGATTCTGAACGCTCTTGAAATCTTGAACGTCCGCGAGCCGTAAGGCTAATCAATACAACTTTTAACAACGGATCTCTTGGCTCTCGCATCGGAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCACGCCTGTTCGAGTGTCGTGAAGCTCTCAAGCTGGTTGTTATTGTCAGCTTGGATATGGACCTTGACGTAAGAGAAGACTGGTCCGAAATGCATTAGCTGACCCTTTGTGGTTCGGTTCTACTCGACGTGATAAATATCGATCGCGAGGACATCTCCAGGGATGGCCGAATTTGCCTGGGACGCTCCTAATC
Multiclavula_mucida_KM248921                       GGAAGCTGATGCCTGGGCGTGTGCTCGCTTCCTGCAAATCTACACCTGTGCACAGAAACGGATCCTGAACGCTCTTGAAATCTTGAACGTCCGCGAGCCGCAAGGCTAATCAATACAACTTTTAACAACGGATCTCTTGGCTCTCGCATCGGAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCACGCCTGTTCGAGTGTCGTGAAGCTCTCAAGCTGGTTGTTATTGTCAGCTTGGATATGGACCTTGACGTAAGAGAAGACTGGTCCGAAATGCATTAGCTGACCCTTTGTGGTTCGGTTCTACTCGACGTGATAAATATCGATCGCGAGGACATCTCCAGGGATGGCCGGATTTGCCTGGGACGCTCCTAATC
'Multiclavula petricola H_Masumoro_356_holotype'   AGAAGCGGATGCTGGGGCATGTGCACGCTTCTCCCAAATTTACACCTGTGCACTCTACTGGGATCTGGATGCTCTTGCAACCTTGAATGATAGCGTGCCACACGGCTAACTAATACAACTTTTAACAACGGATCTCTTGGCTCTCGCATCGGAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCACGCCTGTTCGAGTGTCGTGAAGCTCTCAAGCTGGTCATTGTTGTGAGCTTGGATGTGAGCCGTGTCGCATGAGAGGACTGGTTCTAAATGCATTAGCTGACCCTTTGTGTCTCGGTTCTACTCGACGTGATAAGTATCACTCGTGAGGACATTTTAAAAGATGGCCAAGTACACCTGGGACGCTCCTAATC
'Multiclavula petricola NBRC_XXXXX_ex_type'        AGAAGCGGATGCTGGGGCATGTGCACGCTTCTCCCAAATTTACACCTGTGCACTCTACTGGGATCTGGATGCTCTTGCAACCTTGAATGATAGCGTGCCACACGGCTAACTAATACAACTTTTAACAACGGATCTCTTGGCTCTCGCATCGGAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCACGCCTGTTCGAGTGTCGTGAAGCTCTCAAGCTGGTCATTGTTGTGAGCTTGGATGTGAGCCGTGTCGCATGAGAGGACTGGTTCTAAATGCATTAGCTGACCCTTTGTGTCTCGGTTCTACTCGACGTGATAAGTATCACTCGTGAGGACATTTTAAAAGATGGCCAAGTACACCTGGGACGCTCCTAATC
Multiclavula_vernalis_U66439                       GGAGGTTGATGCCAGGGCGCGTGCTCGCTTCCTGCAAATCCACACCTGTGCACAGTGTGGGACTCTGAAAGCTCTTGAAATCTCGAATGTTCTCGAGCCGCAAGGCTAACTAATACAACTTTTAACAACGGATCTCTTGGCTCTCGCATCGGAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCACGCCTGTTCGAGTGTCGTGAAGCTCTCAAGCTGGTTGTTATTGTCGGCTTGGATATGGATTTTGGCGCCAGAGAGGACTAGTCCTAAATGCATTAGCTGACCCTTTGTGGTTCGGTTCTACTCAACGTGATAAGTATCAATCGTGAGGACATCTCCAGGGATGGCCGGATGCGCCTGGGACGCTTCTAATC
Sistotrema_brinkmanii_AY781270                     GGGAGTTGATGCTGGGGCATGTGCTCGCTTCCGACAAATCTACACCTGTGCACACTGTGAGGGCACGAAAGCACCTATGAAATCGCACGTACTTGCGTCGTATGGCTAAATAATACAACTTTTAACAACGGATCTCTTGGCTCTCGCATCGGAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCACGCCTGTTCGAGTGTCGTGAAACTCTCAAGCTAGATGTTAGTGTCAGCTTGGTTTTGGACTCTGCTGTTCTGGAAGGCTGGTCTCAAATGTATTAGCTGGCTCTTTTGGGATTGGTTCTACTCAGCGTGATAATCTATGACCGTGAGGACATCTCTCGGGATGGCCAAGCCTGCCTGAACTGCTTCTAACT
Sistotrema_raduloides_KF218969                     GAGAGTTGATGACTGTGCAAGTGCTCACTGTCTTAATATCTGCACCTGTGCACTGGCTTGGTTCAGGCATGTCTTTATAATCCTGAATGTTCTTTTGCTGCAAGGCAAACTATAACAACTTTTAACAACGGATCTCTTGGCTCTCGCATCGGAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCCTGGTATTCCGGGGAGCATGCCTGTTCGAGTGTCATTACACTCTCAAGCCAGATGTTCTTATGAGTTTGGATTTGGACTTTGCTGTGAAGGCAAGCTGGTCTTAAATAGAGTAGCTGGCCCATTGAAGCTTGGTTCTACTTGGCGTGATAATTATCTGGCGCAAGGACATTCTCGGGAGTGGCCAATCTTTGTTGGACTGCTTCTAACT
;
END;

BEGIN TREES;
      TITLE Multiclavula_ITS_v191227_petricola;
      LINK TAXA = Taxa1;
         TRANSLATE
            1    Clavulina_caespitosa_DQ056371,
            2    Clavulina_cinerea_AY456339,
            3    Hydnum_albidum_MH379883,
            4    Hydnum_subconnatum_MH379930,
            5    Multiclavula_corynoides_U66440,
            6    Multiclavula_ichthyiformis_DQ492694,
            7    Multiclavula_mucida_DQ521417,
            8    Multiclavula_mucida_EU909345,
            9    Multiclavula_mucida_KM248921,
            10   'Multiclavula petricola H_Masumoro_356_holotype',
            11   'Multiclavula petricola NBRC_XXXXX_ex_type',
            12   Multiclavula_vernalis_U66439,
            13   Sistotrema_brinkmanii_AY781270,
            14   Sistotrema_raduloides_KF218969;
      TREE tree_1 = [&R] (((1:0.110793,2:0.046506):0.129352,(14:0.239939,(3:0.047771,4:0.06138):0.106537):0.068673):0.0346295,(13:0.144519,((6:0.105242,(10:1.0E-6,11:1.0E-6):0.136698):0.003837,(12:0.03317,(5:0.029438,(9:1.0E-6,(7:0.002245,8:0.004452):0.002192):0.011131):0.045405):0.036816):0.092049):0.0346295);



END;