#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on April 20, 2024; 0:27 GMT

TreeBASE (cc) 1994-2008

Study reference:
Schilthuizen M., Gittenberger E., & Gultyaev A. 1995. Phylogenetic relationships
inferred from the sequence and secondary structure of ITS1 rRNA in Albinaria and
putative Isabellaria species (Gastropoda, pulmonata, Clausiliidae). Molecular Phylogenetics
and Evolution, 4(4): 457-462.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S387]

BEGIN TAXA;
        TITLE  Taxa1;
        DIMENSIONS NTAX=5;
        TAXLABELS
            Albinaria_discolor
            Albinaria_hohorsti
            Isabellaria_adriani
            Isabellaria_haessleini
            Isabellaria_praecipua
            ;
END;

BEGIN CHARACTERS;
[! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M2071]

	TITLE Fig._2;
	LINK TAXA = Taxa1;
	DIMENSIONS NCHAR=617;
	FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=- GAP= #;

MATRIX
[                                  10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       ]
[                                   .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .       ]
Albinaria_discolor         AAGAAGCTCGAACTCGATCGCTTGGAGAAAGTAAAAGTCGTAACAAGGTTTCCGTAGTGAACCTGCGGAAGGATCATTATCGGATTCGCCCACGCGCCCCGAGCCGAGACTCGCAAGAGGCA-GGTAGGTTGAAGCTGATGTCACGTCAACTGT--TGCCGGACGGGGACCGCATGAAGCGCCGCCCCGGCGGTTGAAACGTCCCCTTTTTC-GGGGTACCTAGCTGGAC-TTTACGGCGACCCACGGTGACGGCTTGAGCAC-TTGGTGCTCGCCGGGTCGTCAGGTTCAAAGAGCGCTGCAGTGATTGCTCGGCGTAGACTG----------------------AGCGGTGCCGCCC-GGTAGGTTCAGAAGATC---GAGGTACCTATGCATCCTGATATGGGTGCGGCAGCTCCTTCTCAAGCAAGGCGCGAGGCTTAAAGAGGTCGGCGAGCTC-CGGCAGACCCGCCCTCGGTCTTCTCTCGTCCATTTTTTTCTTTTACGACCGCTAATGAAC-TTTATTGTGGCTTGTT-GTGCAGGAGTGGCTCCTGGCTCGAGCGTCCC-GGCACTGACATGGCAAACTGAATCGGTGGATTATAACTTTGAGCGGT
Albinaria_hohorsti         AAGAAGCTCGAACTCGATCGCTTGGAGAAAGTAAAAGTCGTAACAAGGTTTCCGTAGTGAACCTGCGGAAGGATCATTATCGGATTCGCCCACGCGCCCCGAGCCGAGACTCGCAAGAGGCA-GGTAGGTTGAAGCTGATGTCACGTCGTCATTCTTGCCGGACGGGGACCGCATGAAGCGCCGCCCCGGCGGTTGAAACGTCCCCTTTTTCGGGGGTACCTAGCTGGGC----ACGACGACCCACGGTGACGGCTTGAGCATTCTGTTGCTCGCCGGGTCGTC-GGTTCAAAGAGCGCTGCAGTGATTGCTCGGCGTGGCATG----------------------AGCGGTGCCGCCCCGGT-GGCC-AGAAGATC---GAGGTACCTATGCATCCTGACATGGGTGCGGTAGCTCCTTCTCAAACAAGGCGCGAGGCTTAAAGAGGTCGGCAAGCTCTCGGCAGACCCGCCCTCGGTCTTCTCTTGTCCAAACTTTTCTTTTAAGACCGCTAATAAACTTTTATTGTGGCC---T-GTGCAGGAGTGGCTCCTGGCTCGAGCGTCCC-GGCACTGAAATGGCAAACTGAATCGGTGGATTATAACTTTGAGCGGT
Isabellaria_adriani        AAGAAGCTCGAACTCGATCGCTTGGAGAAAGTAAAAGTCGTAACAAGGTTTCCGTAGTGAACCTGCGGAAGGATCATTATCGGATTCGCCCACGCGCCCCGAGCCGGCACTGGCAAGAGGCAACGTAGGTTGAAGCTGATGTCACGTCGTCATTCGTGCCGGACGGGGACCGCATGAAGCGCCGCCCCGGCGGTTGAAACGTCCCCTTTTTC-GGGGTACCTAGCTGGGC----ACGACGACCCACGGTGACGGCTTGAGCAT-CTGGTGCTCGCCGGGTCGTC-GGTTCAAAGAGCGCTGCAGTGACTGCTCGGCGTAGAATG----------------------AGCGGTGCCGCCC-GGTAGGTTTAGAAGATCGGTGAGGTACCTATGCATCCTGTCATGGGTGCGGCAGCTCCTTCTCAAACAAGGCGCGAGGCTTAAAGAGGTCGGCAAGCTCTCGGCAGACCCGCCCTCGGTCTTCTCTTGTCCATTTTTTTTTTTTAAGACCGCTAATAAACTTTTATTGTGGCT---T-GTGCAGGAGTGGCTCCTGGCTCGAGCGTCCC-GGCACTGAAATGGCAAACTGAATCGGTGGATTATAACTTTGAGCGGT
Isabellaria_haessleini     AAGAAGCTCGAACTCGATCGCTTGGAGAAAGTAAAAGTCGTAACAAGGTTTCCGTAGTGAACCTGCGGAAGGATCATTATCGGATTCGCCCACGCGCCCCGAGCCGAGACTCGCAAGAGGCA-GGTAGGTTGAAGCTGATGTCACGTCAACTGT--TGCCGGACGGGGACCGCATGAAGCGCCGCCCCGGCGGTTGAAACGTCCCCTTTTTC-GGGGTACCTAGCTGGAC-TTTACGGCGACCCACGGTGACGGCTTGAGCAC-TTGGTGCTCGCCGGGTCGTC-GGTTCAAAGAGCGCTGCAGTGATTGCTCGGCGTAGACTG----------------------AGCGGTGCCGCCC-GGTAGGTTCAGAAGATCGGCGAGGTACCTATGCATCCTGATATGGGTGCGGCAGCTCCTTCTCAAGCAAGGCGCGAGGCTTAAAGAGGTCGGCGAGCTCTCGGCAGACCCGCCCTCGGTCTTCTCTCGTCCATTTTTT-CTTTTACGACCGCTAATAAAC-TTTATTGTTGCTTGTTTGTGCAGGAGT-GCTCCTGGCTCGAGCGTCCCCGGCACTGATATGGCAAACTGAATCGGTGGATTATAACTTTGAGCGGT
Isabellaria_praecipua      AAGAAGCTCGAACTCGATCGCTTGGAGAAAGTAAAAGTCGTAACAAGGTTTCCGTAGTGAACCTGCGGAAGGATCATTATCGGATTCGCCCACGCGCCC-AAGCCGTGACTGGCAAAAGGCA-GGTAGGTTGAAGCTGATGAAACGTCAAT--TCGTGCCGGACGGGGACCGCAAGAAGCGCCGCCCCGGCGGTTGGCGCTTCCCCTTTTTC-GGGGTACCTACCTGCTCGATTACGACCACCCGCGGTGACGGCTTGAGCAT-CTGGTGCTCGCCGGGTCGTCAGGTTCAAAGAGCGCTGCCGTGATTGCTCGGCCCAGGCTGGCGCTCACTTTGAGTGAGCATGAGCGGTGCCGCCC-GGTAGGT-------------------------------------------------------------------------------------------------AGACCCGCCCTCGGTCTTCTCTTGTCCATTTTTTTTTTTTACGACCGCTTATAAAC-ATTATTGTGGCTT----GTGCAGGAGT-GCTCCTGGCTTGA-CGTCCCCG-CACT-AAATGGCAAACTGAATCGGTGGATTATAACTTTGAGCGGT
;
END;

BEGIN SETS;
	CHARSET 18S (CHARACTERS = Fig._2) =  1-79;
	CHARSET 5.8S (CHARACTERS = Fig._2) =  581-617;
	CHARSET ITS1 (CHARACTERS = Fig._2) =  80-580;
END;
BEGIN TREES;
      TITLE Tb5229;
      LINK TAXA = Taxa1;
         TRANSLATE
            1    Isabellaria_praecipua,
            2    Albinaria_discolor,
            3    Isabellaria_haessleini,
            4    Albinaria_hohorsti,
            5    Isabellaria_adriani;
      TREE Fig._5 = [&R] (((5,4),(3,2)),1)Clausiliidae;



END;