#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on April 26, 2024; 4:11 GMT TreeBASE (cc) 1994-2008 Study reference: Li J., Donoghue M.J., & Boufford D. 2001. Phylogenetics of Buckleya (Santalaceae) based on ITS sequences of nrDNA. Rhodora, 103(914): 137-150. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S680] BEGIN TAXA; TITLE Taxa1; DIMENSIONS NTAX=10; TAXLABELS Buckleya_distichophylla Buckleya_graebneriana_1 Buckleya_graebneriana_2 Buckleya_henryi_1 Buckleya_henryi_2 Buckleya_henryi_3 Buckleya_lanceolata_1 Buckleya_lanceolata_2 Buckleya_lanceolata_3 Thesium_impeditum ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M2259] TITLE ITS; LINK TAXA = Taxa1; DIMENSIONS NCHAR=755; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Buckleya_distichophylla TTGA-AACCTGCTAAGCAGGATGACCGGTGAATATGTTTAACCATTGGGGCGGGTGGCATCTAGTTGTTGCGTCCCTTGTCACCATGCATGCA-GCTCT-CTTGAACATTTTCCTTCCCTA-TGTAT-GGGCCTAGAT--GGCCGCACTGCAGAGGTGGGGG-TTGTTG-TTTTT-GGCAAAGCTTGCTTGTTTGGC--TGACCCTAACCA--TGAATTCGGCACGGAATGTGCCAAGGATGCTTAAGTGAAGGAGCA-GCCCCTTTGTGTGCACCATCATTG-GTGTGATCATGGGGGTGTGGCAACTGTTA----AACATGATGACTCTCGACAACGGATATCTCGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAATCATCGAGTCTTTGAACGCAAGTTGCGCCCAAGGCCATTAGGCTAAGGGCACGTCTGCCTGGGTGTCACGCGCAGTCTAA----ACCCCGAC--AATATTCCCACAGTGTGGTGAGGTCGTTTGGGG-TG--GATGTTGGTTTCCCATGCGAAGTG--TGGTTGGCCAAAATAAAGA-GTTTGCGGTGATGCGCTTAATGACGAGCGGTGGTGAACATCGTCTCTCTTATTTTGCCGTGTGAACT----TTGACCCTTGAACCTCTTCCTGCCGTGTGTGGGTGGAGTATACTTTTTGCGACCCCAGGTCAGGCGGGGCTACCCGCTGAGTTTAAGCATATC Buckleya_graebneriana_1 TTGA-AACCTGCTAAGCAGGATGACCGGTGAATATGTTCAACCATTGGGGCGGCTGGCATCTAGCTGTTGTGTCCCTTGTCGCCGTGCATGCA-GCTCC-CTTGAACATTTTCCTTCCCTA-ATGAATGGGCCTAGACGACCTCATTGCAGAG--GTGGGGGGTTGTTGTTTTTT-GGGAAAGCTTGCTTGTGTGGC--TGACCCTAACCATGTGAATTCGGCACGGAATGTGCCAAGAATGCTCAAGTGAAGGCGCA-GCCTCTGTGTGTGCACCATCATTGGTG-TGATCATGGGGGTGTGGCATCTTTTACAGAAACATGATGACTCTCGACAACGGATATCTCGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAATCATCGAGTCTTTGAACGCAAGTTGCGCCCAAGGCCATTAGGCTAAGGGCACGTCTGCCTGGGTGTCACGCGTA--GTCT--CAACCTTGAC--AACATTCCCACAATGTGGTGAGGTCGATTGGGG-TG--GATGTTGGTTTCCCATGCGAAGTG--TGGTTGGCCAAAATAAAGA-GTTTGCGGTGATGCGCTTAATGACGAGCGGTGGTAAACATCGTCTCTTTTGTTTTGCCGTGTGAACT----TTGACCCTCGAACCTCTTCCTGTCGTGTGTGGGCGGAGTATACTTTTTGCGACCCCAGGTCAGGCGGGGCTACCCGCTGAGTTTAAGCATATC Buckleya_graebneriana_2 TTGA-AACCTGCTAAGCAGGATGACCGGTGAATATGTTCAACCATTGGGGCGGCTGGCATCTAGCTGTTGTGTCCCTTGTCGCCGTGCATGCA-GCTCC-CTTGAACATTTTCCTTCCCTAATGCAT-GGGCCTAGACGACCTCATTGCAGAG--GTGGGGGGTTGTTGTTTTTT-GGGAAAGCTTGCTTGTGTGGC--TGACCCTAACCATGTGAATTCGGCACGGAATGTGCCAAGAATGCTCAAGTGAAGGCGCA-GCCTCTGTGTGTGCACCATCATTGGT-GTGATCATGGGGGTGTGGCATCTTTTACAGAAACATGATGACTCTCGACAACGGATATCTCGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAATCATCGAGTCTTTGAACGCAAGTTGCGCCCAAGGCCATTAGGCTAAGGGCACGTCTGCCTGGGTGTCACGCGTA--GTCT--CAACCTTGAC--AACATTCCCACAATGTGGTGAGGTCGATTGGGG-TG--GATGTTGGTTTCCCATGCGAAGTG--TGGTTGGCCAAAATAAAGA-GTTTGCGGTGATGCGCTTAATGACGAGCGGTGGTAAACATCGTCTCTTTTGTTTTGCCGTGTGAACT----TTGACCCTCGAACCTCTTCCTGTCGTGTGTGGGCGGAGTATACTTTTTGCGACCCCAGGTCAGGCGGGGCTACCCGCTGAGTTTAAGCATATC Buckleya_henryi_1 TTGAGAACCTGCTAAGCAGGATGACCGGTGAACAAGTTCAACCATTGGGGTGGCTGGAATCTTGGTGCTGCGCCCCTTGTCGCCATTCATGTA-GCTCCTCCCAAACACTGTCCTTCCCTG-TGCATGGGGCCGA------ATCGTTGTAGAG--GTGCGGGGCTGTTGTTTTTTATGGGAAGCATGCTTGTTTGGC--TGACCCTAATGA--TGAATTCGGCACGGCATGTGCCAAGGATGCGTAAGTGAAAGAGCA-GCGTTCGTGTGTGCACCATCATTGGTGGTGATCATGGGGGCGTGACATCTGTTACACAAACATGATGACTCTCGACAACGGATATCTCGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGCGAATCATCGAGTCTTTGAACGCAAGTTGCGCCTGAGGCCATTAGGCTAAGGGCATGTCTGCCTGGGTGTCATGCGTAGTGTTA-ACACCCCCGAC--AGCCTTCACACCATGTGGTGACGTCCTTAGGGGGTGTGGATGATGGTTTCCCACGCGAAGTG--TGGTTGGCCAAAATAAAGAAGTTCGCGGTGATGCGCCTAATGACGAACGGTGGAAAACATCGTCCCTCTCGTCTTCCCGCGTGAACT----TTGACCCTCGAACCACTTCCTGCCATGGGCAGGTGGTGTATCCTTTTTGCGACCCCAGGTCAGGCGGGGCCACCCGCTGAGTTTAAGCATATC Buckleya_henryi_2 TTGAGAACCTGCTAAGCAGGATGACCGGTGAACAAGTTCAACCATTGGGGTGGCTGGAATCTTGGTGCTGCGCCCCTTGTCGCCATTCATGTA-GCTCCTCCCAAACACTGTCCTTCCCTG-TGCATGGGGCCGA------ATCGTTGTAGAG--GTGCGGGGCTGTTGTTTTTTACGGGAAGCATGCTTGTTTGGC--TGACCCTAATGA--TGAATTCGGCACGGCATGTGCCAAGGATGCGTAAGTGAAAGAGCA-GCGTTCGTGTGTGCACCATCATTGGTGGTGATCATGGGGGCGTGACATCTGTTACACAAACATGATGACTCTCGACAACGGATATCTCGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGCGAATCATCGAGTCTTTGAACGCAAGTTGCGCCTGAGGCCATTAGGCTAAGGGCATGTCTGCCTGGGTGTCATGCGTAGTGTTA-ACACCCCCGAC--AGCCTTCACACCATGTGGTGACGTCCTTAGGGGGTGTGGATGATGGTTTCCCACGCGAAGTG--TGGTTGGCCAAAATAAAGAAGTTCGCGGTGATGCGCCTAATGACGAACGGTGGAAAACATCGTCCCTCTCGTCTTCCCGCGTGAACT----TTGACCCTCGAACCACTTCCTGCCATGGGCAGGTGGTGTATCCTTTTTGCGACCCCAGGTCAGGCGGGGCCACCCGCTGAGTTTAAGCATATC Buckleya_henryi_3 TTGAGAACCTGCTAAGCAGGATGACCGGTGAACAAGTTCAACCATTGGGGTGGCTGGAATCTTGGTGCTGCGCCCCTTGTCGCCATTCATGTA-GCTCCTCCCAAACACTGTCCTTCCCTG-TGCATGGGGCCGA------ATCGTTGTAGAG--GTGCGGGGCTGTTGTTTTTTACGGGAAGCATGCTTGTTTGGC--TGACCCTAATGA--TGAATTCGGCACGGCATGTGCCAAGGATGCGTAAGTGAAAGAGCA-GCGTTCGTGTGTGCACCATCATTGGTGGTGATCATGGGGGCGTGACATCTGTTACACAAACATGATGACTCTCGACAACGGATATCTCGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGCGAATCATCGAGTCTTTGAACGCAAGTTGCGCCTGAGGCCATTAGGCTAAGGGCATGTCTGCCTGGGTGTCATGCGTAGTGTTA-ACACCCCCGAC--AGCCTTCACACCATGTGGTGACGTCCTTAGGGGGTGTGGATGATGGTTTCCCACGCGAAGTG--TGGTTGGCCAAAATAAAGAAGTTCGCGGTGATGCGCCTAATGACGAACGGTGGAAAACATCGTCCCTCTCGTCTTCCCGCGTGAACT----TTGACCCTCGAACCACTTCCTGCCATGGGCAGGTGGTGTATCCTTTTTGCGACCCCAGGTCAGGCGGGGCCACCCGCTGAGTTTAAGCATATC Buckleya_lanceolata_1 ATGAGAACCTGCTAAGCAGGATGACCGGTGAACAAGTTCAACCATTGGGGTGGCTGGAATCTTGGTGCTGCGCCCCTTGTCGCCATTCGTGTA-GCTCCTCCCGAACACTGTCCTTCCCTG-TGCATGGGGCCTA------ATCGCTGTAGAG--GTGCGGGGCTGTTGTTTTTTATGGGAAGCATGCTTGTTTGGC--TGACCCTAACGA--TTAATTCGGCACGGCATGTGCCAAGGATGCGCAAGTGAAAGAGCA-GCGCCCGTGTGCGCACCATCATTGGTGGTGATCATGGGGGCGTGACATCTGTTACACGAACATGATGACTCTCGACAACGGATATCTCGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGCGAATCATCGAGTCTTTGAACGCAAGTTGCGCCCGAGGCCATTAGGCTAAGGGCATGTCTGCCTGGGTGTCACGCGTAGTGTCAAAGCCCCCCGAC--AGCCTTCACACCATGTGGTGACGTCCTTCGGGGGTGTGGATGATGGCTTCCCATGCGAAGTG--TGGTTGGCCAAAATAAAAAAGTTCGCAGTGATGCGCCTAATGACGAACGGTGGTAAACATCGTCCCTCTCGTCTTCCTGCGTGAACT----TTGACCCTCGAACCCCTTCCTGCCGTGGGCAGGTGGTGTATCCTTTTTGCGACCCCAGGTCAGGCGGGGCCACCCGCTGAGTTTAAGCATATC Buckleya_lanceolata_2 ATGAGAACCTGCTAAGCAGGATGACCGGTGAACAAGTTCAACCATTGGGGTGGCTGGAATCTTGGTGCTGCGCCCCTTGTCGCCATTCGTGTA-GCTCCTCCCGAACACTGTCCTTCCCTG-TGCATGGGGCCTA------ATCGCTGTAGAG--GTGCGGGGCTGTTGTTTTTTATGGGAAGCATGCTTGTTTGGC--TGACCCTAACGA--TTAATTCGGCACGGCATGTGCCAAGGATGCGCAAGTGAAAGAGCA-GCGCCCGTGTGCGCACCATCATTGGTGGTGATCATGGGGGCGTGACATCTGTTACACGAACATGATGACTCTCGACAACGGATATCTCGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGCGAATCATCGAGTCTTTGAACGCAAGTTGCGCCCGAGGCCATTAGGCTAAGGGCATGTCTGCCTGGGTGTCACGCGTAGTGTCAAAGCCCCCCGAC--AGCCTTCACACCATGTGGTGACGTCCTTCGGGGGTGTGGATGATGGCTTCCCATGCGAAGTG--TGGTTGGCCAAAATAAAAAAGTTCGCAGTGATGCGCCTAATGACGAACGGTGGTAAACATCGTCCCTCTCGTCTTCCTGCGTGAACT----TTGACCCTCGAACCCCTTCCTGCCGTGGGCAGGTGGTGTATCCTTTTTGCGACCCCAGGTCAGGCGGGGCCACCCGCTGAGTTTAAGCATATC Buckleya_lanceolata_3 ATGAGAACCTGCTAAGCAGGATGACCGGTGAACAAGTTCAACCATTGGGGTGGCTGGAATCTTGGTGCTGCGCCCCTTGTCGCCATTCGTGTA-GCTCCTCCCGAACACTGTCCTTCCCTG-TGCATGGGGCCTA------ATCGCTGTAGAG--GTGCGGGGCTGTTGTTTTTTATGGGAAGCATGCTTGTTTGGC--TGACCCTAACGA--TTAATTCGGCACGGCATGTGCCAAGGATGCGCAAGTGAAAGAGCA-GCGCCCGTGTGCGCACCATCATTGGTGGTGATCATGGGGGCGTGACATCTGTTACACGAACATGATGACTCTCGACAACGGATATCTCGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGCGAATCATCGAGTCTTTGAACGCAAGTTGCGCCCGAGGCCATTAGGCTAAGGGCATGTCTGCCTGGGTGTCACGCGTAGTGTCAAAGCCCCCCGAC--AGCCTTCACACCATGTGGTGACGTCCTTCGGGGGTGTGGATGATGGCTTCCCATGCGAAGTG--TGGTTGGCCAAAATAAAAAAGTTCGCAGTGATGCGCCTAATGACGAACGGTGGTAAACATCGTCCCTCTCGTCTTCCTGCGTGAACT----TTGACCCTCGAACCCCTTCCTGCCGTGGGCAGGTGGTGTATCCTTTTTGCGACCCCAGGTCAGGCGGGGCCACCCGCTGAGTTTAAGCATATC Thesium_impeditum TCGA-AACCTGCCTAGCAGGGTGACCCGCGAACAAGTTGAACCGCTATAG-------GAG---GGGGCT-CGAGCGAT-------TTGCTGGTT-CTCCTCC---------TGCGCCCCCG-CGC-----------------TCGTAGT-------------GC-----TCTCTGCGAGGAGGCATTCGTGCGTGT-GCGGGCCCTAATGA--TGAATTGGGCGCGGGTTGCGCCAAGGATACATGA-----AGAGCATGCTTTGGTGTGCGCGCCATCACTGGTTGCGCT-AGCTAGGCGTCTTT-AAAT-ACTTATTAAA-ATGACTCTCGGCAACGGATATCTAGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAATCATCGAGTCTTTGAACGCAAGTTGCGCCCGCGGTCTTTTGGCCAAGGGCACGTCTGCCTGGGCGTCA--CCGATTCT-A-TCGCCCCAAACCCACACTTGCGCTTATGGGGCAAGGTG-TGTGTGGGAGCGGATGCTGGTTTCCCGTGCGCAATGCGTGGTTGGCCGAAACGTAGA-GTCCTCGGCGATGCGCTGCACGACGAACGGTGGTGA-CATCGTCTCGCTCGTGTCCTCGTGCGAACTCTCATTGACCCAATGACTTCTTTC-GCCTTGCGTGGAAGGAGTT--CACTATGCGACCCCAGGTCAGGCGGGGCTACCCGCTGAGTTTAAGCATATC ; END; BEGIN TREES; TITLE Tb5795; LINK TAXA = Taxa1; TRANSLATE 1 Thesium_impeditum, 2 Buckleya_henryi_3, 3 Buckleya_henryi_1, 4 Buckleya_graebneriana_2, 5 Buckleya_henryi_2, 6 Buckleya_lanceolata_1, 7 Buckleya_graebneriana_1, 8 Buckleya_lanceolata_2, 9 Buckleya_lanceolata_3, 10 Buckleya_distichophylla; TREE Fig._1 = [&R] (10,((((9,8,6)Buckleya_lanceolata,((5,2),3)Buckleya_henryi),1),(7,4)Buckleya_graebneriana))Buckleya; END;