#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on April 25, 2024; 10:19 GMT TreeBASE (cc) 1994-2008 Study reference: Marston M., & Villalard-bohnsack M. 2002. Genetic variability and potential sources of Grateloupia doryphora (Halymeniaceae, Rhodophyta), an invasive species in Rhode Island waters (USA). Journal of Phycology, 38: 649-658. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S971] BEGIN TAXA; TITLE Taxa1; DIMENSIONS NTAX=21; TAXLABELS Grateloupia_doryphora_England_1 Grateloupia_doryphora_England_2 Grateloupia_doryphora_FortBloque_3 Grateloupia_doryphora_Herault_10 Grateloupia_doryphora_Herault_4 Grateloupia_doryphora_Netherlands_1 Grateloupia_doryphora_Netherlands_2 Grateloupia_doryphora_RhodeIsland_10 Grateloupia_doryphora_RhodeIsland_11 Grateloupia_doryphora_RhodeIsland_4 Grateloupia_doryphora_RhodeIsland_6 Grateloupia_doryphora_Roscoff_1 Grateloupia_doryphora_Roscoff_2 Grateloupia_doryphora_Roscoff_4 Grateloupia_doryphora_Roscoff_5 Grateloupia_sp_California Grateloupia_sp_Herault_1 Grateloupia_sp_Herault_3 Grateloupia_sp_Oregon Grateloupia_sp_Spain_3 Grateloupia_sp_northcarolina_1 ; END; BEGIN TAXA; TITLE Taxa2; DIMENSIONS NTAX=23; TAXLABELS Grateloupia_doryphora_England_1 Grateloupia_doryphora_England_2 Grateloupia_doryphora_FortBloque_3 Grateloupia_doryphora_Herault_10 Grateloupia_doryphora_Herault_4 Grateloupia_doryphora_Netherlands_1 Grateloupia_doryphora_Netherlands_2 Grateloupia_doryphora_RhodeIsland_10 Grateloupia_doryphora_RhodeIsland_11 Grateloupia_doryphora_RhodeIsland_12 Grateloupia_doryphora_RhodeIsland_6 Grateloupia_doryphora_Roscoff_1 Grateloupia_doryphora_Roscoff_2 Grateloupia_doryphora_Roscoff_4 Grateloupia_doryphora_Roscoff_5 Grateloupia_sp_California Grateloupia_sp_Herault_1 Grateloupia_sp_Herault_3 Grateloupia_sp_Oregon Grateloupia_sp_Spain_2 Grateloupia_sp_Spain_3 Grateloupia_sp_northcarolina_1 Grateloupia_sp_northcarolina_3 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M116] TITLE ITS; LINK TAXA = Taxa2; DIMENSIONS NCHAR=867; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= .; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Grateloupia_doryphora_England_1 GGGATCCTTTCCGTAGGTGAACCTGCGGAAGGATCATTCAAAAATGGGGAA..AATAATGGT.GTTT.....AAGGGATTCT.....TTTTTGGATGGC{CT}....CCTTTTGGAGTCTCTCTCTTATCGCCTTATTTTCTTTT.....GTCCATATATTTCGTGAACCATGTT.TTGT.TTTCTT.TTTTTTTT.GTTTAAAACCATTTTT...AAACTCCTTAACTTT..AAACCTTTAACAACAACAACAACTAAAA...TTTACAACTCGTAACGGTGGATGTCTTGGCTCCCACATCGATGAAGAACGCAGCAAAATGCGATACGTAATGCGAATTGCAGAATCCGTGAATCATCAAATCTTTGAACGCAAGTTGCGCTCGCGG.AAATCCTGCGAGCATGTCTGTTTGAGTGTCCGTACAAATTCGATTTTTGCGTGTTTCCGACCCTTTTATTTTCCT......TGTG......AGAAAAAAAGGCAGTATCGGGGCCACAGCAGCTGATGGGTGGAGGA.GTCT......................AAGTGC.T.TCT...C....G......TATTGTCGATGTGAAAGCGCCTATATTAAGTTACGAGGGCCGCGTGGTCACCCGAAGAATTAAGAGCTGGTACAAACTTTTCCAGGCG..TGAATTGTT.AAATTCTATTACGCTGCGAAGTAAGA....GTTTT..TTTACACTTTTTT..CATTGCAGTGTGGTTAGAAGGATTG.CGACTGGAAGGGGGAAGTGGAGCCTG.....GTACCTTTTATTTT........ACA.TTTGGATCTCAAATCAGACAAGACGACCCGCTGAACTTAAGCATATGGATCCC Grateloupia_doryphora_England_2 GGGATCCTTTCCGTAGGTGAACCTGCGGAAGGATCATTCAAAAATGGGGAA..AATAATGGT.GTTT.....AAGGGATTCT.....TTTTTGGATGGCT....CCTTTTGGAGTCTCTCTCTTATCGCCTTATTTTCTTTT.....GTCCATATATTTCGTGAACCATGTT.TTGT.TTTCTT.TTTTTTTTTGTTTAAAACCATTTTT...AAACTCCTTAACTTT..AAACCTTTAACAACAACAACAACTAAAA...TTTACAACTCGTAACGGTGGATGTCTTGGCTCCCACATCGATGAAGAACGCAGCAAAATGCGATACGTAATGCGAATTGCAGAATCCGTGAATCATCAAATCTTTGAACGCAAGTTGCGCTCGCGG.AAATCCTGCGAGCATGTCTGTTTGAGTGTCCGTACAAATTCGATTTTTGCGTGTTTCCGACCCTTTTATTTTCCT......TGTG......AGAAAAAAAGGCAGTATCGGGGCCACAGCAGCTGATGGGTGGAGGA.GTCT......................AAGTGC.T.TCT...C....G......TATTGTCGATGTGAAAGCGCCTATATTAAGTTACGAGGGCCGCGTGGTCACCCGAAGAATTAAGAGCTGGTACAAACTTTTCCAGGCG..TGAATTGTT.AAATTCTATTACGCTGCGAAGTAAGA....GTTTT..TTTACACTTTTTT..CATTGCAGTGTGGTTAGAAGGATTG.CGACTGGAAGGGGGAAGTGGAGCCTG.....GTACCTTTTATTTT........ACA.TTTGGATCTCAAATCAGACAAGACGACCCGCTGAACTTAAGCATATGGATCCC Grateloupia_doryphora_FortBloque_3 GGGATCCTTTCCGTAGGTGAACCTGCGGAAGGATCATTCAAAAATGGGGAA..AATAATGGT.GTTT.....AAGGGATTCT.....TTTTTGGATGGCT....CCTTTTGGAGTCTCTCTCTTATCGCCTTATTTTCTTTT.....GTCCATATATTTCGTGAACCATGTT.TTGT.TTTCTT.TTTTTTTTTGTTTAAAACCATTTTT...AAACTCCTTAACTTT..AAACCTTTAACAACAACAACAACTAAAA...TTTACAACTCGTAACGGTGGATGTCTTGGCTCCCACATCGATGAAGAACGCAGCAAAATGCGATACGTAATGCGAATTGCAGAATCCGTGAATCATCAAATCTTTGAACGCAAGTTGCGCTCGCGG.AAATCCTGCGAGCATGTCTGTTTGAGTGTCCGTACAAATTCGATTTTTGCGTGTTTCCGACCCTTTTATTTTCCT......TGTG......AGAAAAAAAGGCAGTATCGGGGCCACAGCAGCTGATGGGTGGAGGA.GTCT......................AAGTGC.T.TCT...C....G......TATTGTCGATGTGAAAGCGCCTATATTAAGTTACGAGGGCCGCGTGGTCACCCGAAGAATTAAGAGCTGGTACAAACTTTTCCAGGCG..TGAATTGTT.AAATTCTATTACGCTGCGAAGTAAGA....GTTTT..TTTACACTTTTTT..CATTGCAGTGTGGTTAGAAGGATTG.CGACTGGAAGGGGGAAGTGGAGCCTG.....GTACCTTTTATTTT........ACA.TTTGGATCTCAAATCAGACAAGACGACCCGCTGAACTTAAGCATATGGATCCC Grateloupia_doryphora_Herault_10 GGGATCCTTTCCGTGGGTGAACCTGCGGAAGGATCATTCAAAAATGGGGAA..AATAATGGT.GTTT.....AAGGGATTCT.....TTTTTGGATGGCT....CCTTTTGGAGTCTCTCTCTTATCGCCTTATTTTCTTTT.....GTCCATATATTTCGTGAACCATGTT.TTGT.TTTCTT.TTTTTTTT.GTTTAAAACCATTTTT...AAACTCCTTAACTTT..AAACCTTTAACAACAACAACAACTAAAA...TTTACAACTCGTAACGGTGGATGTCTTGGCTCCCACATCGATGAAGAACGCAGCAAAATGCGATACGTAATGCGAATTGCAGAATCCGTGAATCATCAAATCTTTGAACGCAAGTTGCGCTCGCGG.AAATCCTGCGAGCATGTCTGTTTGAGTGTCCGTACAAATTCGATTTTTGCGTGTTTCCGACCCTTTTATTTTCCT......TGTG......AGAAAAAAAGGCAGTATCGGGGCCACAGCAGCTGATGGGTGGAGGA.GTCT......................AAGTGC.T.TCT...C....G......TATTGTCGATGTGAAAGCGCCTATATTAAGTTACGAGGGCCGCGTGGTCACCCGAAGAATTAAGAGCTGGTACAAACTTTTCCAGGCG..TGAATTGTT.AAATTCTATTACGCTGCGAAGTAAGA....GTTTT..TTTACACTTTTTT..CATTGCAGTGTGGTTAGAAGGATTG.CGACTGGAAGGGGGAAGTGGAGCCTG.....GTACCTTTTATTTT........ACA.TTTGGATCTCAAATCAGACAAGACGACCCGCTGAACTTAAGCATATGGATCCC Grateloupia_doryphora_Herault_4 GGGATCCTTTCCGTAGGTGAACCTGCGGAAGGATCATTCAAAAATGGGGAA..AATAATGGT.GTTT.....AAGGGATTCT.....TTTTTGGATGGCT....CCTTTTGGAGTCTCTCTCTTATCGCCT{CT}ATTTTCTTTT.....GTCCATATATTTCGTGAACCATGTT.TTGT.TTTCTT.TTTTTTTT.GTTTAAAACCATTTTT...AAACTCCTTAACTTT..AAACCTTTAACAACAACAACAACTAAAA...TTTACAACTCGTAACGGTGGATGTCTTGGCTCCCACATCGATGAAGAACGCAGCAAAATGCGATACGTAATGCGAATTGCAGAATCCGTGAATCATCAAATCTTTGAACGCAAGTTGCGCTCGCGG.AAATCCTGCGAGCATGTCTGTTTGAGTGTCCGTACAAATTCGATTTTTGCGTGTTTCCGACCCTTTTATTTTCCT......TGTG......AGAAAAAAAGGCAGTATCGGGGCCACAGCAGCTGATGGGTGGAGGA.GTCT......................AAGTGC.T.TCT...C....G......TATTGTCGATGTGAAAGCGCCTATATTAAGTTACGAGGGCCGCGTGGTCACCCGAAGAATTAAGAGCTGGTACAAACTTTTCCAGGCG..TGAATTGTT.AAATTCTATTACGCTGCGAAGTAAGA....GTTTT..TTTACACTTTTTT..CATTGCAGTGTGGTTAGAAGGATTG.CGACTGGAAGGGGGAAGTGGAGCCTG.....GTACCTTTTATTTT........ACA.TTTGGATCTCAAATCAGACAAGACGACCCGCTGAACTTAAGCATATGGATCCC Grateloupia_doryphora_Netherlands_1 GGGATCCTTTCCGTAGGTGAACCTGCGGAAGGATCATTCAAAAATGGGGAA..AATAATGGT.GTTT.....AAGGGATTCT.....TTTTTGGATGGCT....CCTTTTGGAGTCTCTCTCTTATCGCCTTATTTTCTTTT.....GTCCATATATTTCGTGAACCATGTT.TTGT.TTTCTT.TTTTTTTT.GTTTAAAACCATTTTT...AAACTCCTTAACTTT..AAACCTTTAACAACAACAACAACTAAAA...TTTACAACTCGTAACGGTGGATGTCTTGGCTCCCACATCGATGAAGAACGCAGCAAAATGCGATACGTAATGCGAATTGCAGAATCCGTGAATCATCAAATCTTTGAACGCAAGTTGCGCTCGCGG.AAATCCTGCGAGCATGTCTGTTTGAGTGTCCGTACAAATTCGATTTTTGCGTGTTTCCGACCCTTTTATTTTCCT......TGTG......AGAAAAAAAGGCAGTATCGGGGCCACAGCAGCTGATGGGTGGAGGA.GTCT......................AAGTGC.T.TCT...C....G......TATTGTCGATGTGAAAGCGCCTATATTAAGTTACGAGGGCCGCGTGGTCACCCGAAGAATTAAGAGCTGGTACAAACTTTTCCAGGCG..TGAATTGTT.AAATTCTATTACGCTGCGAAGTAAGA....GTTTT..TTTACACTTTTTT..CATTGCAGTGTGGTTAGAAGGATTG.CGACTGGAAGGGGG{AG}AGTGGAGCCTG.....GTACCTTTTATTTT........ACA.TTTGGATCTCAAATCAGACAAGACGACCCGCTGAACTTAAGCATATGGATCCC Grateloupia_doryphora_Netherlands_2 GGGATCCTTTCCGTAGGTGAACCTGCGGAAGGATCATTCAAAAATGGGGAA..AATAATGGT.GTTT.....AAGGGATTCT.....TTTTTGGATGGCT....CCTTTTGGAGTCTCTCTCTTATCGCCTTATTTTCTTTT.....GTCCATATATTTCGTGAACCATGTT.TTGT.TTTCTT.TTTTTTTT.GTTTAAAACCATTTTT...AAACTCCTTAACTTT..AAACCTTTAACAACAACAACAACTAAAA...TTTACAACTCGTAACGGTGGATGTCTTGGCTCCCACATCGATGAAGAACGCAGCAAAATGCGATACGTAATGCGAATTGCAGAATCCGTGAATCATCAAATCTTTGAACGCAAGTTGCGCTCGCGG.AAATCCTGCGAGCATGTCTGTTTGAGTGTCCGTACAAATTCGATTTTTGCGTGTTTCCGACCCTTTTATTTTCCT......TGTG......AGAAAAAAAGGCAGTATCGGGGCCACAGCAGCTGATGGGTGGAGGA.GTCT......................AAGTGC.T.TCT...C....G......TATTGTCGATGTGAAAGCGCCTATATTAAGTTACGAGGGCCGCGTGGTCACCCGAAGAATTAAGAGCTGGTACAAACTTTTCCAGGCG..TGAATTGTT.AAATTCTATTACGCTGCGAAGTAAGA....GTTTT..TTTACACTTTTTT..CATTGCAGTGTGGTTAGAAGGATTG.CGACTGGAAGGGGGAAGTGGAGCCTG.....GTACCTTTTATTTT........ACA.TTTGGATCTCAAATCAGACAAGACGACCCGCTGAACTTAAGCATATGGATCCC Grateloupia_doryphora_RhodeIsland_10 GGGATCCTTTCCGTAGGTGAACCTGCGGAAGGATCATTCAAAAATGGGGAA..AATAATGGT.GTTT.....AAGGGATTCT.....TTTTTGGATGGCT....CCTTTTGGAGTCTCTCTCTTA{CT}CGCCTTATTTTCTTTT.....GTCCATATATTTCGTGAACCATGTT.TTGT.TTTCTT.TTTTTTTT.GTTTAAAACCATTTTT...AAACTCCTTAACTTT..AAACCTTTAACAACAACAACAACTAAAA...TTTACAACTCGTAACGGTGGATGTCTTGGCTCCCACATCGATGAAGAACGCAGCAAAATGCGATACGTAATGCGAATTGCAGAATCCGTGAATCATCAAATCTTTGAACGCAAGTTGCGCTCGCGG.AAATCCTGCGAGCATGTCTGTTTGAGTGTCCGTACAAATTCGATTTTTGCGTGTTTCCGACCCTTTTATTTTCCT......TGTG......AGAAAAAAAGGCAGTATCGGGGCCACAGCAGCTGATGGGTGGAGGA.GTCT......................AAGTGC.T.TCT...C....G......TATTGTCGATGTGAAAGCGCCTATATTAAGTTACGAGGGCCGCGTGGTCACCCGAAGAATT{AG}AGAGCTGGTACAAACTTTTCCAGGCG..TGAATTGTT.AAATTCTATTACGCTGCGAAGTAAGA....GTTTT..TTTACACTTTTTT..CATTGCAGTGTGGTTAGAAGGATTG.CGACTGGAAGGGGGAAGTGGAGCCTG.....GTACCTTTTATTTT........ACA.TTTGGATCTCAAATCAGACAAGACGACCCGCTGAACTTAAGCATATGGATCCC Grateloupia_doryphora_RhodeIsland_11 GGGATCCTTTCCGTAGGTGAACCTGCGGAAGGATCATTCAAAAATGGGGAA..AATAATGGT.GTTT.....AAGGGATTCT.....TTTTTGGATGGCT....CCTTTTGGAGTCTCTCTCTTATCGCCTTATTTTCTTTT.....GTCCATATATTTCGTGAACCATGTT.TTGT.TTTCTT.TTTTTTTT.GTTTAAAACCATTTTT...AAACTCCTTAACTTT..AAACCTTTAACAACAACAACAACTAAAA...TTTACAACTCGTAACGGTGGATGTCTTGGCTCCCACATCGATGAAGAACGCAGCAAAATGCGATACGTAATGCGAATTGCAGAATCCGTGAATCATCAAATCTTTGAACGCAAGTTGCGCTCGCGG.AAATCCTGCGAGCATGTCTGTTTGAGTGTCCGTACAAATTCGATTTTTGCGTGTTTCCGACCCTTTTATTTTCCT......TGTG......AGAAAAAAAGGCAGTATCGGGGCCACAGCAGCTGATGGGTGGAGGA.GTCT......................AAGTGC.T.TCT...C....G......TATTGTCGATGTGAAAGCGCCTATATTAAGTTACGAGGGCCGCGTGGTCACCCGAAGAATTAAGAGCTGGTACAAACTTTTCCAGGCG..TGAATTGTT.AAATTCTATTACGCTGCGAAGTAAGA....GTTTT..TTTACACTTTTTT..CATTGCAGTGTGGTTAGAAGGATTG.CGACTGGAAGGGGGAAGTGGAGCCTG.....GTACCTTTTATTTT........ACA.TTTGGATCTCAAATCAGACAAGACGACCCGCTGAACTTAAGCATATGGATCCC Grateloupia_doryphora_RhodeIsland_12 GGGATCCTTTCCGTAGGTGAACCTGCGGAAGGATCATTCAAAAATGGGGAA..AATAATGGT.GTTT.....AAGGGATTCT.....TTTTTGGATGGCT....CCTTTTGGAGTCTCTCTCTTATCGCCTTATTTTCTTTT.....GTCCATATATTTCGTGAACCATGTT.TTGT.TTTCTT.TTTTTTTT.GTTTAAAACCATTTTT...AAACTCCTTAACTTT..AAACCTTTAACAACAACAACAACTAAAA...TTTACAACTCGTAACGGTGGATGTCTTGGCTCCCACATCGATGAAGAACGCAGCAAAATGCGATACGTAATGCGAATTGCAGAATCCGTGAATCATCAAATCTTTGAACGCAAGTTGCGCTCGCGG.AAATCCTGCGAGCATGTCTGTTTGAGTGTCCGTACAAATTCGATTTTTGCGTGTTTCCGACCCTTTTATTTTCCT......TGTG......AGAAAAAAAGGCAGTATCGGGGCCACAGCAGCTGATGGGTGGAGGA.GTCT......................AAGTGC.T.TCT...C....G......TATTGTCGATGTGAAAGCGCCTATATTAAGTTACGAGGGCCGCGTGGTCACCCGAAGAATTAAGAGCTGGTACAAACTTTTCCAGGCG..TGAATTGTT.AAATTCTATTACGCTGCGAAGTAAGA....GTTTT..TTTACACTTTTTT..CATTGCAGTGTGGTTAGAAGGATTG.CGACTGGAAGGGGGAAGTGGAGCCTG.....GTACCTTTTATTTT........ACA.TTTGGATCTCAAATCAGACAAGACGACCCGCTGAACTTAAGCATATGGATCCC Grateloupia_doryphora_RhodeIsland_6 GGGATCCTTTCCGTAGGTGAACCTGCGGAAGGATCATTCAAAAATGGGGAA..AATAATGGT.GTTT.....AAGGGATTCT.....TTTTTGGATGGCT....CCTTTTGGAGTCTCTCTCTTATCGCCTTATTTTCTTTT.....GTCCATATATTTCGTGAACCATGTT.TTGT.TTTCTT.TTTTTTTT.GTTTAAAACCATTTTT...AAACTCCTTAACTTT..AAACCTTTAACAACAACAACAACTAAAA...TTTACAACTCGTAACGGTGGATGTCTTGGCTCCCACATCGATGAAGAACGCAGCAAAATGCGATACGTAATGCGAATTGCAGAATCCGTGAATCATCAAATCTTTGAACGCAAGTTGCGCTCGCGG.AAATCCTGCGAGCATGTCTGTTTGAGTGTCCGTACAAATTCGATTTTTGCGTGTTTCCGACCCTTTTATTTTCCT......TGTG......AGAAAAAAAGGCAGTATCGGGGCCACAGCAGCTGATGGGTGGAGGA.GTCT......................AAGTGC.T.TCT...C....G......TATTGTCGATGTGAAAGCGCCTATATTAAGTTACGAGGGCCGCG{CT}GGTCACCCGAAGAATTAAGAGCTGGTACAAACTTTTCCAGGCG..TGAATTGTT.AAATTCTATTACGCTGCGAAGTAAGA....GTTTT..TTTACACTTTTTT..CATTGCAGTGTGGTTAGAAGGATTG.CGACTGGAAGGGGGAAGTGGAGCCTG.....GTACCTTTTATTTT........ACA.TTTGGATCTCAAATCAGACAAGACGACCCGCTGAACTTAAGCATATGGATCCC Grateloupia_doryphora_Roscoff_1 GGGATCCTTTCCGTAGGTGAACCTGCGGAAGGATCATTCAAAAATGGGGAA..AATAATGGT.GTTT.....AAGGGATTCT.....TTTTTGGATGGCT....CCTTTTGGAGTCTCTCTCTTATCGCCTTATTTTCTTTT.....GTCCATATATTTCGTGAACCATGTT.TTGT.TTTCTT.TTTTTTTT.GTTTAAAACCATTTTT...AAACTCCTTAACTTT..AAACCTTTAACAACAACAACAACTAAAA...TTTACAACTCGTAACGGTGGATGTCTTGGCTCCCACATCGATGAAGAACGCAGCAAAATGCGATACGTAATGCGAATTGCAGAATCCGTGAATCATCAAATCTTTGAACGCAAGTTGCGCTCGCGG.AAATCCTGCGAGCATGTCTGTTTGAGTGTCCGTACAAATTCGATTTTTGCGTGTTTCCGACCCTTTTATTTTCCT......TGTG......AGAAAAAAAGGCAGTATCGGGGCCACAGCAGCTGATGGGTGGAGGA.GTCT......................AAGTGC.T.TCT...C....G......TATTGTCGATGTGAAAGCGCCTATATTAAGTTACGAGGGCCGCGTGGTCACCCGAAGAATTAAGAGCTGGTACAAACTTTTCCAGGCG..TGAATTGTT.AAATTCTATTACGCTGCGAAGTAAGA....GTTTT..TTTACACTTTTTT..CATTGCAGTGTGGTTAGAAGGATTG.CGACTGGAAGGGGGAAGTGGAGCCTG.....GTACCTTTTATTTT........ACA.TTTGGATCTCAAATCAGACAAGACGACCCGCTGAACTTAAGCATATGGATCCC Grateloupia_doryphora_Roscoff_2 GGGATCCTTTCCGTAGGTGAACCTGCGGAAGGATCATTCAAAAATGGGGAA..AATAATGGT.GTTT.....AAGGGATTCT.....TTTTTGGATGGCT....CCTTTTGGAGTCTCTCTCTTATCGCCTTATTTTCTTTT.....GTCCATATATTTCGTGAACCATGTT.TTGT.TTTCTT.TTTTTTTT.GTTTAAAACCATTTTT...AAACTCCTTAACTTT..AAACCTTTAACAACAACAACAACTAAAA...TTTACAACTCGTAACGGTGGATGTCTTGGCTCCCACATCGATGAAGAACGCAGCAAAATGCGATACGTAATGCGAATTGCAGAATCCGTGAATCATCAAATCTTTGAACGCAAGTTGCGCTCGCGG.AAATCCTGCGAGCATGTCTGTTTGAGTGTCCGTACAAATTCGATTTTTGCGTGTTTCCGACCCTTTTATTTTCCT......TGTG......AGAAAAAAAGGCAGTATCGGGGCCACAGCAGCTGATGGGTGGAGGA.GTCT......................AAGTGC.T.TCT...C....G......TATTGTCGATGTGAAAGCGCCTATATTAAGTTACGAGGGCCGCGTGGTCACCCGAAGAATTAAGAGCTGGTACAAACTTTTCCAGGCG..TGAATTGTT.AAATTCTATTACGCTGCGAAGTAAGA....GTTTT..TTTACACTTTTTT..CATTGCAGTGTGGTTAGAAGGATTG.CGACTGGAAGGGGGAAGTGGAGCCTG.....GTACCTTTTATTTT........ACA.TTTGGATCTCAAATCAGACAAGACGACCCGCTGAACTTAAGCATATGGATCCC Grateloupia_doryphora_Roscoff_4 GGGATCCTTTCCGTAGGTGAACCTGCGGAAGGATCATTCAAAAATGGGGAA..AATAATGGT.GTTT.....AAGGGATTCT.....TTTTTGGATGGCT....CCTTTTGGAGTCTCTCTCTTATCGCCTTATTTTCTTTT.....GTCCATATATTTCGTGAACCATGTT.TTGT.TTTCTT.TTTTTTTT.GTTTAAAACCATTTTT...AAACTCCTTAACTTT..AAACCTTTAACAACAACAACAACTAAAA...TTTACAACTCGTAACGGTGGATGTCTTGGCTCCCACATCGATGAAGAACGCAGCAAAATGCGATACGTAATGCGAATTGCAGAATCCGTGAATCATCAAATCTTTGAACGCAAGTTGCGCTCGCGG.AAATCCTGCGAGCATGTCTGTTTGAGTGTCCGTACAAATTCGATTTTTGCGTGTTTCCGACCCTTTTATTTTCCT......TGTG......AGAAAAAAAGGCAGTATCGGGGCCACAGCAGCTGATGGGTGGAGGA.GTCT......................AAGTGC.T.TCT...C....G......TATTGTCGATGTGAAAGCGCCTATATTAAGTTACGAGGGCCGCGTGGTCACCCGAAGAATTAAGAGCTGGTACAAACTTTTCCAGGCG..TGAATTGTT.AAATTCTATTACGCTGCGAAGTAAGA....GTTTT..TTTACACTTTTTT..CATTGCAGTGTGGTTAGAAGGATTG.CGACTGGAAGGGGGAAGTGGAGCCTG.....GTACCTTTTATTTT........ACA.TTTGGATCTCAAATCAGACAAGACGACCCGCTGAACTTAAGCATATGGATCCC Grateloupia_doryphora_Roscoff_5 ..........................GGAAGGATCATTCAAAAATGGGGAA..AATAATGGT.GTTT.....AAGGGATTCT.....TTTTTGGATGGCT....CCTTTTGGAGTCTCTCTCTTATCGCCTTATTTTCTTTT.....GTCCATATATTTCGTGAACCATGTT.TTGT.TTTCTT.TTTTTTTT.GTTTAAAACCATTTTT...AAACTCCTTAACTTT..AAACCTTTAACAACAACAACAACTAAAA...TTTACAACTCGTAACGGTGGATGTCTTGGCTCCCACATCGATGAAGAACGCAGCAAAATGCGATACGTAATGCGAATTGCAGAATCCGTGAATCATCAAATCTTTGAACGCAAGTTGCGCTCGCGG.AAATCCTGCGAGCATGTCTGTTTGAGTGTCCGTACAAATTCGATTTTTGCGTGTTTCCGACCCTTTTATTTTCCT......TGTG......AGAAAAAAAGGCAGTATCGGGGCCACAGCAGCTGATGGGTGGAGGA.GTCT......................AAGTGC.T.TCT...C....G......TATTGTCGATGTGAAAGCGCCTATATTAAGTTACGAGGGCCGCGTGGTCACCCGAAGAATTAAGAGCTGGTACAAACTTTTCCGGGCG..TGAATTGTT.AAATTCTATTACGCTGCGAAGTAAGA....GTTTT..TTTACACTTTTTT..CATTGCAGTGTGGTTAGAAGGATTG.CGACTGGAAGGGGGAAGTGGAGCCTG.....GTACCTTTTATTTT........ACA.TTTGGATCTCAAATCAGACAAGACGACCCGCTGAACTTAAGCATATGGATCCC Grateloupia_sp_California GGGATCCTTTCCGTAGGTGAACCTGCGGAAGGATCATTCAAAAATGGGGAA..A.TAATGGTTGTTT.....AAGGGATTCTATCTTTTTTTGGATGGCT....TTTTTTGAAGTCTCTCTCTTAACGCCTTATTTTCTTTT.....GTCCATATATTTCGTGAACCATGTT.TTGT.TATCTT.TTTTTT...GTTTAAAACCTTTTTTT..AAACTCCAT.....T..AAACCTTAAAAAAC..CAAAAACTAAAA...TTTACAACTCGTAACGGTGGATGTCTTGGCTCCCACATCGATGAAGAACGCAGCAAAATGCGATACGTAATGCGAATTGCAGAATCCGTGAATCATCAAATCTTTGAACGCAAGTTGCGCTCGCGGGAAATCCTGCGAGCATGTCTGTT{CT}GAGTGTCCGTACAAATTCGATTTTTGCGTGTTTCCGACCCTTTGGTTTTTCTCACTCTTGTAGGGGGAAGAAAAAAAGGCAGTATCGGGGCCACAGCAGCTGATGGGTGGAGGA.GTCT......................AAGTGC.T.TCT...C....G......TATGATCGATGTGAAAGCGCCTATATTAAGTTACGAGGGCCGCGTGGTCACCCGAAGAATTAAGAGCTGGTACAATCTTTTCCAAGCG..T.AATTGTT.AAATTCTATTACGCTGCGAAGTAATAATAAGTGTT..AAAAAACTTTTTTTTCATTGCAGTGTGGTTAGAATGATTA.CGATTGGGAGGGGGACGTGGAGCCTT.....GCACCTCT.ATTTTATA.......ATTTTGGATCTCAAATCAGACAAGACGACCCGCTGAACTTAAGCATATGGATCCC Grateloupia_sp_Herault_1 GGGATCCTTTCCGTAGGTGAACCTGCGGAAGGATCATTCAAAAATGGGGAAGTAAAAATTG..GTAT.....AGGGGATT.........TTT.GATGGCTCT....TTGTTGAGTCTCTCCCTT.GTGCCTTTTTTTATTTTTCTTTGTCCATATATTTCGTGAACCATGATATTGTGTCTCTTCTTTTTTTTTGTTTAAA.CCTTTTTT...AAACTAC..AACTTTTGGAAC..TATTATAC....AAAACTAAAA...ATTACAACTCGTAACGGTGGATGTCTTGGCTCCCACATCGATGAAGAACGCAGCAAAATGCGATACGTAATGCGAATTGCAGAATCCGTGAATCATCAAATCTTTGAACGCAAGTTGCGCTCGCGGGAAATCCTGCGAGCATGTCTGTTTGAGTGTCCGTACAAATTGGATCTTTGCGTGTTTCTGACCCTTT..TTTCGCG................AG.AAAGAAGGCAGTATCGGGTGCACAGCAGCTGATGGGTGTAGAA.GTCAGATGGGGGGA...GAAATGCGGAACTCCGTCTCTCCTCAAATGAGCTTCTTTTGTCCTTGTGAAAGCGCCTATATTAAGTTACGAAGGCCGCATGGTCACCCGAA.AAATGAGAGCTGGGACAATCTTTTCCGATCGGATCAATTGCG...TTTCGATTACGTTGCGAAGTAAGA....GTTTTTTT....ACTTTTGG....TTGCAGCGTAGTTAGAAGGATCT.TGA.TGGAAAGGGGACGTGGAGCCTGTGACCGCAGCATTGCTGATAAAAAAAAACATTTTGGATCTCAAATCAGACAAGACGACCCGCTGAACTTAAGCATATGGATCCC Grateloupia_sp_Herault_3 GGGATCCTTTCCGTAGGTGAACCTGCGGAAGGATCATTCAAAAATGGGGAAGTAAAAATT{AG}..GTAT.....AGGGGATT.........TTT.GATGGCTCT....TTGTTGAGTCTCTCCCTT.GTGCCTTTTTTTATTTTTCTTTGTCCATATATTTCGTGAACCATGATATTGTGTCTCTTCTTTTTTTTTGTTTAAA.CCTTTTTT...AAACTAC..AACTTTTGGAAC..TATTATAC....AAAACTAAAA...ATTACAACTCGTAACGGTGGATGTCTTGGCTCCCACATCGATGAAGAACGCAGCAAAATGCGATACGTAATGCGAATTGCAGAATCCGTGAATCATCAAATCTTTGAACGCAAGTTGCGCTCGCGGGAAATCCTGCGAGCATGTCTGTTTGAGTGTCCGTACAAATTGGATCTTTGCGTGTTTCTGACCCTTT..TTTCGCG................AG.AAAGAAGGC{AG}GTATCGGGTGCACAGCAGCTGATGGGTGTAGAA.GTCAGATGGGGGGA...GAAATGCGGAACTCCGTCTCTCCTCAAATGAGCTTCTTTTGTCCTTGTGAAAGCGCCTATATTAAGTTACGAAGGCCGCATGGTCACCCGAA.AAATGAGAGCTGGGACAATCTTTTCCGATCGGATCAATTGCG...TTTCGATTACGTTGCGAAGTAAGA....GTTTTTTT....ACTTTTGG....TTGCAGCGTAGTTAGAAGGATCT.TGA.TGGAAAGGGGACGTGGAGCCTGTGACCGCAGCATTGCTGATAAAAAAAAACATTTTGGATCTCAAATCAGACAAGACGACCCGCTGAACTTAAGCATATGGATCCC Grateloupia_sp_Oregon GGGATCCTTTCCGTAGGTGAACCTGCGGAAGGATCATTCAAAAATGGGGAA..A.TAATGGTTGTTT.....AAGGGATTCTATCTTTTTTTGGATGGCT....TTTTTTAAAGTCTCTCTCTTAACGCCTTATTTTCT{AT}TT.....GTCCATATATTTCGTGAACCATGTT.TTGT.TATCTT.TTTTTT...GTTTAAAACCTTTTTTT..AAACTCCAT.....T..AAACCTTAAAAAAC..CAAAAACTAAAA...TTTACAACTCGTAACGGTGGATGTCTTGGCTCCCACATCGATGAAGAACGCAGCAAAATGCGATACGTAATGCGAATTGCAGAATCCGTGAATCATCAAATCTTTGAACGCAAGTTGCGCTCGCGGGAAATCCTGCGAGCATGTCTGTTTGAGTGTCCGTACAAATTCGATTTTTGCGTGTTTCCGACCCTTTGGTTTTTCTCACTCTTGTAGGGGGAAGAAAAAAAGGCAGTATCGGGGCCACAGCAGCTGATGGGTGGAGGA.GTCT......................AAGTGC.T.TCT...C....G......TATGATCGATGTGAAAGCGCCTATATTAAGTTACGAGGGCCGCGTGGTCACCCGAAGAATTAAGAGCTGGTACAATCTTTTCCAAGCG..T.AATTGTT.AAATTCTATTACGCTGCGAAGTAATAATAAGTGTT..AAAAAACTTTTTTTTCATTGCAGTGTGGTTAGAATGATTA.CGATTGGGAGGGGGACGTGGAGCCTT.....GCACCTCT.ATTTTATA.......ATTTTGGATCTCAAATCAGACAAGACGACCCGCTGAACTTAAGCATATGGATCCC Grateloupia_sp_Spain_2 GGGATCCTTTCCGTAGGTGAACCTGCGGAAGGATCATTCAAAAATGGGGAA..A.TAATGGC.GTCCAAAAAAAGGGA...........TTT.GATGGCT.....CTTTT.GAGTCTCTCTCTT.TTGCCTTATTTTCTTT......GTCCATATATTTCGTGAACCATGTT.GTGT.TATATT.TTTTTTT..GTTTAAA.CCTTTTTTTTTAAACTCC..AAC..TT..AAC...AAA.AACCAATAAACCTAAAA...TTTACAACTCGTAACGGTGGATGTCTTGGCTCCCACATCGATGAAGAACGCAGCAAAATGCGATACGTAATGCGAATTGCAGAATCCGTGAATCATCAAATCTTTGAACGCAAGTTGCGCTCGTGGGAAATCCTGCGAGCATGTCTGTTTGAGTGTCCGTACAAATTCGATTTTTGCGTGTTTCCGACCCTTC..TTTAA........TGTATT.....TTAAAGGAGGCAGTATCGGGGCCACAGCAGCTGATGGGTGTAGGAAGTCAGGCGGGTTCTCTTTTTTTTTTGGAGTCC.TGTTTGAAC....T...TTCTTTTGTCGATATGAAAGCGCAG.TCGTTTTTTGCGAAGGCCGTGTCGTCACCCGAAGAGTTAAGAGCTGGTACAATCTTTTCCAGGCG..TTAATCGTT.TAATTCTATTACGCTGCGAAGTAAGA....GTTTTTTTTATTGCTTTTTC..CGCTGCAGTGTGATTAGAATGATTATCCTTTGGAAGGGGGAAGTGGAGCCTG.....GCACCCTTTTTTTTTT.AA.......TTTGGATCTCAAATCAGACAAGACGACCCGCTGAACTTAAGCATATGGATCCC Grateloupia_sp_Spain_3 GGGATCCTTTCCGTAGGTGAACCTGCGGAAGGATCATTCAAAAATGGGGAA..A.TAATGGC.GTCCAAAAAAAGGGA...........TTT.GATGGCT.....CTTTT.GAGTCTCTCTCTT.TTGCCTTATTTTCTTT......GTCCATATATTTCGTGAACCATGTT.GTGT.TATATT.TTTTTTT..GTTTAAA.CCTTTTTTTTTAAACT{CT}C..AAC..TT..AAC...AAA.AACCAATAAACCTAAAA...TTTACAACTCGTAACGGTGGATGTCTTGGCTCCCACATCGATGAAGAACGCAGCAAAATGCGATACGTAATGCGAATTGCAGAATCCGTGAATCATCAAATCTTTGAACGCAAGTTGCGCTCGTGGGAAATCCTGCGAGCATGTCTGTTTGAGTGTCCGTACAAATTCGATTTTTGCGTGTTTCCGACCCTTC..TTTAA........TGTATT.....TTAAAGGAGGCAGTATCGGGGCCACAGCAGCTGATGGGTGTAGGAAGTCAGGCGGGTTCTCTTTTTTTTTTGGAGTCC.TGTTTGAAC....T...TTCTTTTGTCGATATGAAAGCGCAG.TCGTTTTTTGCGAAGGCCGTGTCGTCACCCGAAGAGTTAAGAGCTGGTACAATCTTTTCCAGGCG..TTAATCGTT.TAATTCTATTACGCTGCGAAGTAAGA....GTTTTTTTTATTGCTTTTTC..CGCTGCAGTGTGATTAGAATGATTATCCTTTGGAAGGGGGAAGTGGAGCCTG.....GCACCCTTTTTTTTTT.A........TTTGGATCTCAAATCAGACAAGACGACCCGCTGAACTTAAGCATATGGATCCC Grateloupia_sp_northcarolina_1 GGGATCCTTTCCGTAGGTGAACCTGCGGAAGGATCATTCAAAAATGGGGAA..A.TAATGGT.GAAC.....AAGAGATTCT......TTTT.GATGGCTCTTTTTTTTTTGAGTCTCTCCCTTCTAGCCTTATTTTCTTT......GTCCATATGTTTCGTGAACCATGTT.TTCT.TA{AC}CTT.TTTTTTTT.GTTTAAA.CCTTTTTT...AAACTCC..AAC...TGAAACCTTAAAAAAC..CAAAAACTAAAAACATTTACAACT{CT}GTAACGGTGGATGTCTTGGCTCCCACATCGATGAAGAACGCAGCAAAATGCGATACGTAATGCGAATTGCAGAATCCGTGAATCATCAAATCTTTGAACGCAAGTTGCGCTCGCGGGAAATCCTGCGAGCATGTCTGTTTGAGTGTCCGTACAAATACGATTTTTGCGTGTTTCCGACCCTTTTTTTT.CCC........TCGG.....GAAAAAAAGGCAGTATCGGGGCCACAGCAGCTGATGGGTGTAGAA.GTCGGGTAGGAGGA...TTTTTTTAAAAATGT.T.TCTGTTC....GAGCTTCTTTTGTCGATGTGAAAGCGCCTATATTAAGTTACGAAGGCCGCGTGGTCACCCGAAGAGTTAAGAGCTGGTACAATCTTTTCCAGGCG..T.AATCGTTTAAATTCTATTACGCTGCGAAGTAAGA....GTTTT....CAAACTTTTTATTCATTGCAGTGTGGTTAGGATGATTG.CGACTGGGAGGGGGACGTGGAGCCTG.....GCACCCTTTTTTTTTT.AA.......TTTGGATCTCAAATCAGACAAGACGACCCGCTGAACTTAAGCATATGGATCCC Grateloupia_sp_northcarolina_3 GGGATCCTTTCCGTAGGTGAACCTGCGGAAGGATCATTCAAAAATGGGGAA..A.TAATGGT.GAAC.....AAGAGATTCT......TTTT.GATGGCTCTTTTTTTTTTGAGTCTCTCCCTTCTAGCCTTATTTTCTTT......GTCCATATGTTTCGTGAACCATGTT.TTCT.TAACTT.TTTTTTTT.GTTTAAA.CCTTTTTT...AAACTCC..AAC...TGAAACC{CT}TAAAAAAC..CAAAAACTAAAAACATTTACA{AG}CTCGTAACGGTGGATGTCTTGGCTCCCACATCGATGAAGAACGCAGCAAAATGCGATACGTAATGCGAATTGCAGAATCCGTGAATCATCAAATCTTTGAACGCAAGTTGCGCTCGCGGGAAATCCTGCGAGCATGTCTGTTTGAGTGTCCGTACAAATACGATTTTTGCGTGTTTCCGACCCTTTTTTTTTCCC........TCGG.....GAAAAAAAGGCAGTATCGGGGCCACAGCAGCTGATGGGTGTAGAA.GTCGGGTAGGAGGA...TTTTTTTAAAAATGT.T.TCTGTTC....GAGCTTCTTTTGTCGATGTGAAAGCGCCTATATTAAGTTACGAAGGCCGCGTGGTCACCCGAAGAGTTAAGAGCTGGTACAATCTTTTCCAGGCG..T.AATCGTTTAAATTCTATTACGCTGCGAAGTAAGA....GTTTT....CAAACTTTTTATTCATTGCAGTGTGGTTAGGATGATTG.CGACTGGGAGGGGGACGTGGAGCCTG.....GCACCCTTTTTTTTTTTAA.......TTTGGATCTCAAATCAGACAAGACGACCCGCTGAACTTAAGCATATGGATCCC ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M508] TITLE COX_spacer_region; LINK TAXA = Taxa1; DIMENSIONS NCHAR=350; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= .; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Grateloupia_doryphora_England_1 ATACCTGGTCGTTTAAACCAAACTTCATTATTTATAAAAAGAGAAGGCTTGTATTATGGGCAATGTAGTGAGATTTGCGGAATTAATCATGGTTTTATGCCTATTGTTGTTGAAGCGGTTTCGCTACCAAATTACATTACTTGGATTTCTAACAAATTAAGCGAGTAAATTTATGAGAATTTCTGTATTGCAACTGACTTTACTGGTTGTTTTATTTTTATTACTTTTTAACTCAAATTCACAAATCGTTAAAAACATTCGTGAGTTGATTAAACAGTTCTTCAAACAAATATCAAAACAGTAATTGA.AAAAATGACTTTTTTAACTCAAATTTCAAAATCCGTGCAAA Grateloupia_doryphora_England_2 ATACCTGGTCGTTTAAACCAAACTTCATTATTTATAAAAAGAGAAGGCTTGTATTATGGGCAATGTAGTGAGATTTGCGGAATTAATCATGGTTTTATGCCTATTGTTGTTGAAGCGGTTTCGCTACCAAATTACATTACTTGGATTTCTAACAAATTAAGCGAGTAAATTTATGAGAATTTCTGTATTGCAACTGACTTTACTGGTTGTTTTATTTTTATTACTTTTTAACTCAAATTCACAAATCGTTAAAAACATTCGTGAGTTGATTAAACAGTTCTTCAAACAAATATCAAAACAGTAATTGA.AAAAATGACTTTTTTAACTCAAATTTCAAAATCCGTGCAAA Grateloupia_doryphora_FortBloque_3 ATACCTGGTCGTTTAAACCAAACTTCATTATTTATAAAAAGAGAAGGCTTGTATTATGGGCAATGTAGTGAGATTTGCGGAATTAATCATGGTTTTATGCCTATTGTTGTTGAAGCGGTTTCGCTACCAAATTACATTACTTGGATTTCTAACAAATTAAGCGAGTAAATTTATGAGAATTTCTGTATTGCAACTGACTTTACTGGTTGTTTTATTTTTATTACTTTTTAACTCAAATTCACAAATCGTTAAAAACA{CT}TCGTGAGTTGATTAAACAGTTCTTCAAACAAATATCAAAACAGTAATTGA.AAAAATGACTTTTTTAACTCAAATTTCAAAATCCGTGCAAA Grateloupia_doryphora_Herault_10 ATACCTGGTCGTTTAAACCAAACTTCATTATTTATAAAAAGAGAAGGCTTGTATTATGGGCAATGTAGTGAGATTTGTGGAATTAATCATGGTTTTATGCCTATTGTTGTTGAAGCGGTTTCGCTACCAAATTACATTACTTGGATTTCTAACAAATTAAGCGAGTAAATTTATGAGAATTTCTGTATTGCAACTGACTTTACTGGTTGTTTTATTTTTATTACTTTTTAACTCAAATTCACAAATCGTTAAAAACATTCGTGAGTTGATTAAACAGTTCTTCAAACAAATATCAAAACAGTAATTGA.AAAAATGACTTTTTTAACTCAAATTTCAAAATCCGTGCAAA Grateloupia_doryphora_Herault_4 ATACCTGGTCGTTTAAACCAAACTTCATTATTTATAAAAAGAGAAGGCTTGTATTATGGGCAATGTAGTGAGATTTGTGGAATTAATCATGGTTTTATGCCTATTGTTGTTGAAGCGGTTTCGCTACCAAATTACATTACTTGGATTTCTAACAAATTAAGCGAGTAAATTTATGAGAATTTCTGTATTGCAACTGACTTTACTGGTTGTTTTATTTTTATTACTTTTTAACTCAAATTCACAAATCGTTAAAAACATTCGTGAGTTGATTAAACAGTTCTTCAAACAAATATCAAAACAGTAATTGA.AAAAATGACTTTTTTAACTCAAATTTCAAAATCCGTGCAAA Grateloupia_doryphora_Netherlands_1 ATACCTGGTCGTTTAAACCAAACTTCATTATTTATAAAAAGAGAAGGCTTGTATTATGGGCAATGTAGTGAGATTTGCGGAATTAATCATGGTTTTATGCCTATTGTTGTTGAAGCGGTTTCGCTACCAAATTACATTACTTGGATTTCTAACAAATTAAGCGAGTAAATTTATGAGAATTTCTGTATTGCAACTGACTTTACTGGTTGTTTTATTTTTATTACTTTTTAACTCAAATTCACAAATCGTTAAAAACATTCGTGAGTTGATTAAACAGTTCTTCAAACAAATATCAAAACAGTAATTGA.AAAAATGACTTTTTTAACTCAAATTTCAAAATCCGTGCAAA Grateloupia_doryphora_Netherlands_2 ATACCTGGTCGTTTAAACCAAACTTCATTATTTATAAAAAGAGAAGGCTTGTATTATGGGCAATGTAGTGAGATTTGCGGAATTAATCATGGTTTTATGCCTATTGTTGTTGAAGCGGTTTCGCTACCAAATTACATTACTTGGATTTCTAACAAATTAAGCGAGTAAATTTATGAGAATTTCTGTATTGCAACTGACTTTACTGGTTGTTTTATTTTTATTACTTTTTAACTCAAATTCACAAATCGTTAAAAACATTCGTGAGTTGATTAAACAGTTCTTCAAACAAATATCAAAACAGTAATTGA.AAAAATGACTTTTTTAACTCAAATTTCAAAATCCGTGCAAA Grateloupia_doryphora_RhodeIsland_10 ATACCTGGTCGTTTAAACCAAACTTCATTATTTATAAAAAGAGAAGGCTTGTATTATGGGCAATGTAGTGAGATTTGCGGAATTAATCATGGTTTTATGCCTATTGTTGTTGAAGCGGTTTCGTTACCAAATTACATTACTTGGATTTCTAACAAATTAAGCGAGTAAATTTATGAGAATTTCTGTATTGCAACTGACTTTACTGGTTGTTTTATTTTTATTACTTTTTAACTCAAATTCACAAATCGTTAAAAACATTCGTGAGTTGATTAAACAGTTCTTCAAACAAATATCAAAACAGTAATTGA.AAAAATGACTTTTTTAACTCAAATTTCAAAATCCGTGCAAA Grateloupia_doryphora_RhodeIsland_11 ATACCTGGTCGTTTAAACCAAACTTCATTATTTATAAAAAGAGAAGGCTTGTATTATGGGCAATGTAGTGAGATTTGCGGAATTAATCATGGTTTTATGCCTATTGTTGTTGAAGCGGTTTCGTTACCAAATTACATTACTTGGATTTCTAACAAATTAAGCGAGTAAATTTATGAGAATTTCTGTATTGCAACTGACTTTACTGGTTGTTTTATTTTTATTACTTTTTAACTCAAATTCACAAATCGTTAAAAACATTCGTGAGTTGATTAAACAGTTCTTCAAACAAATATCAAAACAGTAATTGA.AAAAATGACTTTTTTAACTCAAATTTCAAAATCCGTGCAAA Grateloupia_doryphora_RhodeIsland_4 ATACCTGGTCGTTTAAACCAAACTTCATTATTTATAAAAAGAGAAGGCTTGTATTATGG{AG}CAATGTAGTGAGATTTGCGGAATTAATCATGGTTTTATGCCTATTGTTGTTGAAGCGGTTTCGTTACCAAATTACATTACTTGGATTTCTAACAAATTAAGCGAGTAAATTTATGAGAATTTCTGTATTGCAACTGACTTTACTGGTTGTTTTATTTTTATTACTTTTTAACTCAAATTCACAAATCGTTAAAAACATTCGTGAGTTGATTAAACAGTTCTTCAAACAAATATCAAAACAGTAATTGA.AAAAATGACTTTTTTAACTCAAATTTCAAAATCCGTGCAAA Grateloupia_doryphora_RhodeIsland_6 ATACCTGGTCGTTTAAACCAAACTTCATTATTTATAAAAAGAGAAGGCTTGTATTATGGGCAATGTAGTGAGATTTGCGGAATTAATCATGGTTTTATGCCTATTGTTGTTGAAGCGGTTTCGTTACCAAATTACATTACTTGGATTTCTAACAAATTAAGCGAGTAAATTTATGAGAATTTCTGTATTGCAACTGACTTTACTGGTTGTTTTATTTTTATTACTTTTTAACTCAAATTCACAAATCGTTAAAAACATTCGTGAGTTGATTAAACAGTTCTTCAAACAAATATCAAAACAGTAATTGA.AAAAATGACTTTTTTAACTCAAATTTCAAAATCCGTGCA{AT}A Grateloupia_doryphora_Roscoff_1 ATACCTGGTCGTTTAAACCAAACTTCATTATTTATAAAAAGAGAAGGCTTGTATTATGGGCAATGTAGTGAGATTTGTGGAATTAATCATGGTTTTATGCCTATTGTTGTTGAAGCGGTTTCGCTACCAAATTACATTACTTGGATTTCTAACAAATTAAGCGAGTAAATTTATGA{AG}AATTTCTGTATTGCAACTGACTTTACTGGTTGTTTTATTTTTATTACTTTTTAACTCAAATTCACAAATCGTTAAAAACATTCGTGAGTTGATTAAACAGTTCTTCAAACAAATATCAAAACAGTAATTGA.AAA{AT}ATGACTTTTTTAACTCAAATTTCAAAATCCGTGCAAA Grateloupia_doryphora_Roscoff_2 ATACCTGGTCGTTTAAACCAAACTTCATTATTTATAAAAAGAGAAGGCTTGTATTATGGGCAATGTAGTGAGATTTGTGGAATTAATCATGGTTTTATGCCTATTGTTGTTGAAGCGGTTTCGCTACCAAATTACATTACTTGGATTTCTAACAAATTAAGCGAGTAAATTTATGAGAATTTCTGTATT{AG}CAACTGACTTTACTGGTTGTTTTATTTTTATTACTTTTTAACTCAAATTCACAAATCGTTAAAAACATTCGTGAGTTGATTAAACAGTTCTTCAAACAAATATCAAAACAGTAATTGA.AAAAATGACTTTTTTAACTCAAATTTCAAAATCCGTGCAAA Grateloupia_doryphora_Roscoff_4 ATACCTGGTCGTTTAAACCAAACTTCATTATTTATAAAAAGAGAAGGCTTGTATTATGGGCAATGTAGTGAGATTTGTGGAATTAATCATGGTTTTATGCCTATTGTTGTTGAAGCGGTTTCGCTACCAAATTACATTACTTGGATTTCTAACAAATTAAGCGAGTAAATTTATGAGAATTTCTGTATTGCAACTGACTTTACTGGTTGTTTTATTTTTATTACTTTTTAACTCAAATTCACAAATCGTTAAAAACATTCGTGAGTTGATTAAACAGTTCTTCAAACAAATATCAAAACAGTAATTGA.AAAAATGACTTTTTTAACTCAAATTTCAAAATCCGTGCAAA Grateloupia_doryphora_Roscoff_5 ATACCTGGTCGTTTAAACCAAACTTCATTATTTATAAAAAGAGAAGGCTTGTATTATGGGCAATGTAGTGAGATTTGTGGAATTAATCATGGTTTTATGCCTATTGTTGTTGAAGCGGTTTCGCTACCAAATTACATTACTTGGATTTCTAACAAATTAAGCGAGTAAATTTATGAGAATTTCTGTATTGCAACTGACTTTACTGGTTGTTTTATTTTTATTACTTTTTAACTCAAATTCACAAATCGTTAAAAACATTCGTGAGTTGATTAAACAGTTCTTCAAACAAATATCAAAACAGTAATTGA.AAAAATGACTTTTTTAACTCAAATTTCAAAATCCGTGCAAA Grateloupia_sp_California ATACCTGGCCGCTTAAACCAAACTTCGTTATTTATAAAAAGGGAAGGTTTATACTACGGGCAATGTAGCGAGATTTGTGGGATTAATCATGGTTTTATGCCTATTGTTGTTGAAGCAGTTTCATTACCAAATTACATTACCTGAATTTCCAATAAATTAAGCGAGTAAATTTATGAGAGTTTCCGTAGTACAACTAACTTTATTGGTTATTTTATTTTTATTACTTTTTAATTCAAATTCGCAAGTTGTTAAAAATCTTCGCGAGTTAGTTAAACAGTTCTTCAAACAAATGTCAAAATAGTAATTG..AAAAATGACCTTTTTAACTCAAATTTCAAAATCTGTGCAAA Grateloupia_sp_Herault_1 ATTCCTGGCCGTTTAAATCAAACTTCATTGTTTATAAAACGAGAAGGATTGTATTATGGGCAATGCAGCGAGATTTGTGGAATTAATCATGGGTTTATGCCTATTGTTGTTGAAGCGGTCTCATTACCAAATTATATTACTTGAATCTCTAATAAATTAAGCGAATAGATTTATGAGAATTTCTGTAATACAATTAATTTTATTAATTATTTTATTTTTATTATTTTTTAATTCAAATTCACAAATTGTTAAAAACTTTCGTGAATTGATCAAACAATTTTTCAAACAAATATCAAAATAGTAATTGT.AAAAATGGCTTTTTTAACTCAGATTTCAAAATCTATACAAA Grateloupia_sp_Herault_3 ATTCCTGGCCGTTTAAATCAAACTTCATTGTTTATAAAACGAGAAGGATTGTATTATGGGCAATGCAGCGAGATTTGTGGAATTAATCATGGGTTTATGCCTATTGTTGTTGAAGCGGTCTCATTACCAAATTATATTACTTGAATCTCTAATAAATTAAGCGAATAGATTTATGAGAATTTCTGTAATACAATTAATTTTATTAATTATTTTATTTTTATTATTTTTTAATTCAAATTCACAAATTGTTAAAAACTTTCGTGAATTGATCAAACAATTTTTCAAACAAATATCAAAATAGTAATTGT.AAAAATGGCTTTTTTAACTCAGATTTCAAAATCTATACAAA Grateloupia_sp_Oregon ATACCTGGTCGCTTAAACCAAACTTCGTTATTTATAAAAAGGGAAGGTTTATACTACGGGCAATGTAGCGAGATTTGTGGGATTAATCATGGTTTTATGCCTATTGTTGTTGAAGCAGTTTCATTACCAAATTACATTACCTGAATTTCCAATAAATTAAGCGAGTAAATTTATGAGAGTTTCCGTAGTACAACTAACTTTATTGGTTATTTTATTTTTATTACTTTTTAATTCAAATTCGCAAGTTGTTAAAAATCTTCGCGAGTTAGTTAAACAGTTCTTCAAACAAATATCAAAATAGTAATTG..AAAAATGACCTTTTTAACTCAAATTTCAAAATCTGTGCAAA Grateloupia_sp_Spain_3 ATTCCCGGCCGCTTAAACCAAACTTCGTTATTTATAAAAAGAGAAGGTTTATACTATGGACAATGTAGTGAGATTTGTGGGATTAATCATGGTTTTATGCCCATTGTTGTTGAAGCAGTTTCGTTACCAAATTATATTACTTGAATTTCTAATAAATTAAGCGAGTAAATTTATG{CT}GATTTTCTATAATGCAATTAATTTTATTGGTTATTTTATTTTTATTACTTTTTAACTCAAATTCACAAATTGTTAAAAATCTTCGTGAATTTATTAAACGGTTCTTTAATCAAATATCAAAACAATAATTG..TAAAATGACTTTTTTAACTCAAATTTCAAAATCTGTGCAAA Grateloupia_sp_northcarolina_1 ATTCCTGGTCGTTTAAATCAAACCTCATTATTTATAAAAAGAGAAGGTTTATATTACGGACAATGTAGCGAGATTTGTGGAATTAATCACGGCTTTATGCCTATTGTTGTTGAAGCAGTTTCGCTACCAAATTACATTACTTGAATTTCTAATAAATTAAGCGAGTAAGTTTATGAAAATCTCTGTAGTGCAACTAATTTTATTAGTTATTTTATTTTTGTTACTTTTTAATTCGAATTCACAAATAGTTAAAAATTTTCGTGAGTTGATTAAACAGTTTTTCAAACAAATATCAAAACAGTAATTAC.AAAAATGACTTTTTTAACTCAAATTTCAAAATCCGTACAAA ; END; BEGIN TREES; TITLE Tb6444; LINK TAXA = Taxa1; TRANSLATE 1 Grateloupia_sp_Spain_3, 2 Grateloupia_sp_Oregon, 3 Grateloupia_sp_California, 4 Grateloupia_sp_northcarolina_1, 5 Grateloupia_doryphora_Roscoff_1, 6 Grateloupia_doryphora_Roscoff_2, 7 Grateloupia_doryphora_Herault_10, 8 Grateloupia_doryphora_Herault_4, 9 Grateloupia_doryphora_Roscoff_5, 10 Grateloupia_doryphora_Roscoff_4, 11 Grateloupia_doryphora_England_1, 12 Grateloupia_doryphora_Netherlands_2, 13 Grateloupia_doryphora_Netherlands_1, 14 Grateloupia_doryphora_FortBloque_3, 15 Grateloupia_doryphora_England_2, 16 Grateloupia_doryphora_RhodeIsland_4, 17 Grateloupia_doryphora_RhodeIsland_11, 18 Grateloupia_doryphora_RhodeIsland_10, 19 Grateloupia_doryphora_RhodeIsland_6, 20 Grateloupia_sp_Herault_3, 21 Grateloupia_sp_Herault_1; TREE Fig._5 = [&R] (21,(20,(((((19,18,17,16),15,14,13,12,11),10,9,8,7,6,5),((3,2),1)),4))); END; BEGIN TREES; TITLE Tb6443; LINK TAXA = Taxa2; TRANSLATE 1 Grateloupia_sp_Herault_3, 2 Grateloupia_sp_Herault_1, 3 Grateloupia_sp_Spain_3, 4 Grateloupia_sp_Spain_2, 5 Grateloupia_sp_northcarolina_3, 6 Grateloupia_sp_northcarolina_1, 7 Grateloupia_doryphora_RhodeIsland_10, 8 Grateloupia_doryphora_England_1, 9 Grateloupia_doryphora_Netherlands_1, 10 Grateloupia_doryphora_RhodeIsland_6, 11 Grateloupia_doryphora_Roscoff_4, 12 Grateloupia_doryphora_RhodeIsland_12, 13 Grateloupia_doryphora_Herault_4, 14 Grateloupia_doryphora_FortBloque_3, 15 Grateloupia_doryphora_England_2, 16 Grateloupia_doryphora_RhodeIsland_11, 17 Grateloupia_doryphora_Netherlands_2, 18 Grateloupia_doryphora_Roscoff_2, 19 Grateloupia_doryphora_Roscoff_1, 20 Grateloupia_doryphora_Herault_10, 21 Grateloupia_doryphora_Roscoff_5, 22 Grateloupia_sp_Oregon, 23 Grateloupia_sp_California; TREE Fig._4 = [&R] (23,(22,((21,20,19,18,17,16,15,14,13,12,11,10,9,8,7),(((6,5),(4,3)),(2,1))))); END;