#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on April 28, 2024; 13:14 GMT TreeBASE (cc) 1994-2008 Study reference: Klich M., Cary J., Beltz S., & Bennett C. 2003. Phylogenetic and Morphological Analysis of Aspergillus ochraceoroseus. Mycologia, null. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S987] BEGIN TAXA; TITLE Taxa1; DIMENSIONS NTAX=13; TAXLABELS Aspergillus_alliaceus Aspergillus_bombycis_NRRL25593 Aspergillus_bombycis_NRRL28900 Aspergillus_caelatus Aspergillus_flavus Aspergillus_nidulans Aspergillus_nomius_NRRL13137 Aspergillus_nomius_NRRL29212 Aspergillus_ochraceoroseus Aspergillus_parasiticus Aspergillus_pseudotamarii_NRRL25517 Aspergillus_pseudotamarii_NRRL443 Aspergillus_versicolor ; END; BEGIN TAXA; TITLE Taxa2; DIMENSIONS NTAX=15; TAXLABELS Aspergillus_alliaceus Aspergillus_bombycis Aspergillus_flavus Aspergillus_fumigatus Aspergillus_nidulans Aspergillus_nomius_NRRL13137 Aspergillus_nomius_NRRL25393 Aspergillus_ochraceoroseus Aspergillus_ochraceus Aspergillus_parasiticus Aspergillus_pseudotamarii_NRRL25517 Aspergillus_pseudotamarii_NRRL443 Aspergillus_tamarii_NRRL20818 Aspergillus_tamarii_NRRL25565 Aspergillus_versicolor ; END; BEGIN TAXA; TITLE Taxa3; DIMENSIONS NTAX=13; TAXLABELS Aspergillus_alliaceus Aspergillus_bombycis Aspergillus_flavus_ATCC96044 Aspergillus_flavus_NRRL1957 Aspergillus_nidulans Aspergillus_nomius_NRRL13137 Aspergillus_nomius_NRRL29212 Aspergillus_ochraceoroseus Aspergillus_parasiticus_ATCC26691 Aspergillus_parasiticus_ATCC56775 Aspergillus_pseudotamarii_NRRL25517 Aspergillus_pseudotamarii_NRRL443 Aspergillus_versicolor ; END; BEGIN TAXA; TITLE Taxa4; DIMENSIONS NTAX=15; TAXLABELS Aspergillus_alliaceus Aspergillus_bombycis Aspergillus_flavus Aspergillus_fumigatis Aspergillus_nidulans Aspergillus_nomius_NRRL13137 Aspergillus_nomius_NRRL25393 Aspergillus_ochraceoroseus Aspergillus_ochraceus Aspergillus_parasiticus Aspergillus_pseudotamarii_NRRL25517 Aspergillus_pseudotamarii_NRRL443 Aspergillus_tamariiNRRL20818 Aspergillus_tamariiNRRL25565 Aspergillus_versicolor ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M532] TITLE aflR; LINK TAXA = Taxa3; DIMENSIONS NCHAR=1105; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Aspergillus_alliaceus ------------CATCCACCACCTCCGCCTCAACCAGATCAACCACCACAC-------GCTCTGCCCACCCCCAATGGTAGCGGTAGCGTCTC-GGCCATCTTTTCCCATCAGAGCCCCCCTCTACCCTTGGAGGCCCAGGGGC-------TGGGAGGAGAGTTGTCT-GGTCAGGAGCAAGGCACCCTGTCTTCGCTAACGGTCGA---TTCGGAATTTGGGGACTCTTTGCAGTCCATCGATCACGGAAACCATGCCGATTTCTTGGCGGAGCCGACGGGGAGTCTGTTTGACGCGTTCTTGGAAGTGGGGACTCCC--ATGATTGACCCGTTCCTCGAGTCGGCCCCAGTACCGCCGTTTGAA-ACGCGTTATTGCTGCTTTTCGCTCGCACTACAAACGCTGTCCCACCTCTTCCCCCACGCCCCGCTGGGCTGTCAGCTACGGCTGACGGGTGGCGAGGATAGCTCGTGCAACCTGACAACGATCGACATGGTCCTCTCGGGGAACAAGAAGGCGACCGATGTGGTCCGGAACATCCTCGGGTGTTCGTGTGCGCAGGATGGCTACTTGCTGAGTATGGTTGTCCTTATCGTCCTCAAGGTGCTGGCATGGTATGCTGCCGCAGCCGGCACTCAGTGCCCCTCGACGGCGGTGGGTGGAAATAACAGCAGTGA---------CAGCAGCGGTAGCA-GCCGGAGCA--GCAGCAGCAGTAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Aspergillus_bombycis ------------CCTGCACAACGTCAACCTCCGTCGGATCAACCACCACAC-------GCTCTGCCCACCCCCAACGGTAGCAGTAGCGTGTC-CGCCATCTTTTCCCATCAGAGTCCCCCCGCCCCCTTGGAAACCCAGGGCC-------TGGGAGGAGATTTGTCG-GGTCAGGAGCAAGGCACCCTGTCTTCTCTCACGGTCGA---CTCGGACTTTGGGGACTCGATGCAGTCCATCGATCACGGAAACCATGCCGATTTCTTGGTGGAGCCCACGGGGAGTCTTTTCGACGCGTTCTTGGAAGTGGGGACTCCC--ATGATCGACCCGTTCCTCGAGTCGGCCGCATTCCCGCCGTTTCAG-GCACGCTACTGCTGCTTTTCGCTCGCACTACAAACACTGACCCACCTCTTCCCCCACGCCCCACTGGGCTGTCAGCTACGGCTGACGGATGGCGAGGAAAGCTCGTGCAACCTGACGACGATCGACATGGTCATCTCCGGGAACAAGAAGGCCACCGACGTGGTTCGGAAGATCCTCGAGTGTTCGTGCGCGCAGGACGGCTACTTGCTGAGCCTGGTCGTCCTGATCGTTCTCAAGGTGCTGGCGTGGTATGCGGCCGCAGCAGGCACCCAGTACACCTCGACGGTGGTGGGTGGAAATAACAGCAGCGA---------CAGCAGCGGTAGCA-GCAGGGGCA--GCAGCAGTAGTAGCAACAGTCCCGCCACCGTGTCCGAAGAGCGCGTGCTGCACCACCCTAGTATGGTGGGCGAGGATTGTGTGGATGAGGAAGACCAGCCGCGAGTGGCGGCACAGCTTGTTCTGAGCGAACTGCACCGAGTGCAGTCGCTGGTGAACCTATTGGCCAAGCGCCTGCAAGA-------------------------------------AGGTGGAGACGATGCAGCAGGGATACCGGCGCACCATCCAGCG-----------------------------TCCCCTTTCTCACTACTCGGTTTTAGTGGCCTCGAAGCAAATCTCCGCCAACGTTTGCGCGCCGTGTCCTCAGACATTATTAATTTCCTGCAGCAAGAATGA Aspergillus_flavus_ATCC96044 ------------CATCCACAATCTCATCCTCAATCGAATCAACCACCACAC-------GCTCTGCCCACCCCCAATGGTAGCAGTAGCGTCTC-CGCCATCTTTTCTCATCAGAGTCCGCCGCCACCCGTGGAGACCCAGGGCC-------TTGGAGGAGATCTGGCT-GGTCAGGAGCAAAGCACCCTGTCTTCCCTAACAGTCGA---TTCGGAATTCGGGGGCTCTTTGCAGTCAATGGAACACGGAAACCATGCCGATTTCTTGGCCGAGTCGACGGGGAGTCTTTTCGACGCGTTTTTGGAAGTAGGGACCCCC--ATGATCGACCCGTTCTTCGAGTCGGCCCCACTACCACCGTTTCAG-GCGCGCTATTGCTGCTTTTCGCTAGCACTACAAACACTGACCCACCTCTTCCCCCACGCCCCGCTGGGCTGTCAACTACGGCTGACGGACGGTGAGGACAGTTCGTGCAACCTGATGACGACTGATATGGTCATCTCGGGGAACAAGAGGGCTACCGATGCGGTCCGGAAGATCCTCGGGTGTTCGTGCGCGCAGGATGGCTACTTGCTGAGCATGGTCGTCCTTATCGTTCTCAAGGTGCTGGCATGGTATGCTGCGGCAGCAGGCACCCAGTGTACCTCAACGGCGGCGGGTGGAGAAACCAACAGTGG---------CAGCTGTAGCAACA-GTCCCGCCACCGTGTC--CAGTGGC---TGTC---------TGACGGAAGAGCGCGTGCTGCACCTCCCTAGTATGATGGGCGAGGATTGTGTGGATGAGGAAGACCAGCCGCGAGTGGCGGCACAGCTTGTTCTGAGTGAACTGCACCGAGTCCAGTCGCTGGTGAACCTATTGGCCAAGCGCCTGCAAGA-------------------------------------AGGTGGAGACGATGCAGCAGGGATACCGGCGCACCATCCAGCG-----------------------------TCCCCTTTCTCACTACTCGGGTTTAGTGGCCTCGAAGCAAATCTCCGCCACCGTTTGCGCGCCGTGTCCTCCGACATTATTGATTACCTGCATCGAGAATGA Aspergillus_flavus_NRRL1957 ------------CATCCACAATCTCATCCTCAATCGAATCAACCACCACAC-------GCTCTGCCCACCCCGAATGGTAGCAGTAGCGTCTC-CGCCATCTTTTCTCATCAGAGTCCGCCGCCACCCGTGGAGACCCAGGGCC-------TTGGAGGAGATCTGGCT-GGTCAGGAGCAAAGCACCCTGTCTTCCCTAACAGTCGA---TTCGGAATTCGGGGGCTCGTTGCAGTCAATGGAACACGGAAACCATGCCGATTTCTTGGCCGAGTCGACGGGGAGTCTTTTCGACGCGTTTTTGGAAGTAGGGACCCCC--ATGATCGACCCGTTCCTCGAGTCGGCCCCACTACCACCGTTTCAG-GCGCGCTATTGCTGCTTTTCGCTAGCACTACAAACACTGACCCACCTCTTCCCCCACGCCCCGCTGGGCTGTCAACTACGGCTGACGGACGGTGAGGACAGTTCGTACAACCTGATGACGACTGATATGGTCATCTCGGGGAACAAGAGGGCTACCGATGCGGTCCGGAAGATCCTCGGGTGTTCGTGCGCGCAGGATGGCTACTTGCTGAGCATGGTCGTCCTTATCGTTCTCAAGGTGCTGGCATGGTATGCTGCGGCAGCAGGCACCCAGTGTACCTCAACGGCGGCGAGTGGAGAAACCAACAGTGG---------CAGCTGTAGCAACA-GTCCCGCCACCGTGTC--CAGTGGC---TGTC---------TGACGGAAGAGCGCGTGCTGCACCTCCCTAGTATGGTGGGCGAGGATTGTGTGGATGAGGAAGACCAGCCGCGAGTGGCGGCACAGCTTGTTCTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Aspergillus_nidulans GCTGTT------CATACACCTGTC--ATTACTACGGCGCCCTCTCCCAAGCCGGTGCAGATCCAGTCTCCTCCAGCCGAACCAGATCTCTGGGGCGCCATCCTGTCTC-CGAATACTTCCACCTCCACC----GACCTATCGTCACTCCTCTCGGTGAATACAAATTTCAGTCAGCTCTTCGCCTCGCTTTCTCCTTCGCTTCTTGAGGGTATGGATGGCATGGATGC--CGAAATGCACG---CGCCGGAGCTG-GGCGCATTGTCGGTCG--CCGACCC---ATCGTCCTCCATGATGCAGGG-GTTAGAGGCCCCT-AACG-CTGCCC-AACCACCGTCTTCGAA----------CACCACAA-GC-CACTCCTACTGCCTGTCCATCTGCCTGGATACTCTCATGCGGCTCTTTCCGAATGCTGGCGCTAACTGCGAG---CGAC---CCGGGCACGAGAGCAACCCCGGCAAACTGTTCACTATCGAGTCCGTTATTGAGGACAACAAACAAATCTTGGACACAGCGCAGACAATCCTGGCTTGCCGCTGCGCCGAGGATGAGTACGTGGTCACTCTCGTCTCACTTATTGTCTTCAAGGTTCTTGGATGGTACGTCGCCGCGGCTCGGGATAGGT---CGTCGGACCCGGGGCGCGAAGAAGACTTCAACTG--------GTCGACTGCCCAAGA-------------------CAGTCGTAGAGGTTCGGTCTCTTCCTTTGAGGAGCAGGTGCTGCATCTTCCCACCGTCGTCGGCACTTATTGCATTGATGGCCATCATCAGAGCCGCATGGCAGCCCAGCTGGTGCTGAGCGAGCTATACCGCGTCCAACGACTGGTGACTCAGGTAAGCCGTCGCCTAGAATCTATTCGCCGCCGCTCCTCGAGC---------------AGCTCGAGCTCTGCCTCTAGTAATACAACGGACTCTGACGGCGGGATGTCGA---------------------CCCCCTTGTCGTCGACCACCCTGGTCCATCTAGAAGACGATTTGCGCAAGCGCCTGCGTGCCGTCTCAAGCGAAACGATCAGCATCCTCCGCCACGCCTGA Aspergillus_nomius_NRRL13137 ------------CATCCACCACCTCCGCCTCAATCGGATCAACCACCACAC-------GCTCTGCCCACCCCCAATGGTAGCGGTAGCGTCTC-AGCCATCTTTTCCCATCAGAGCCCCCCGCTACCCTTGGAGGCCCAGGGGC-------TGGGGGGAGAGTTGTCT-GGTCAGGAGCAAGGCACCCTGTCTTCGCTAACGGTCGA---TTCGGAATTTGGGGACTCTTTGCATTCCATCGATCACGGAAACCATGCCGATTTCTTGGCGGAGCCGACGGGGAGTCTTTTCGACGCCTTCTTGGAAGTGGGGACTCCC--ATGATCGACCCGTTCCTCGAGTCGGCACCAGTACCGCCGTTTGAA-ACGCGCTATTGCTGCTTTTCGCTGGCACTACAAACGCTGACCCACCTCTTCCCCCACGCCCCGCTGGGCTGTCAGCTACGGCTGACGGGTGGCGAGGATAGCTCGTGCAACCTGACGACGATCGACATGGTCCTCTCGGGGAACAAGAAGGCGACCGATGTGGTCCGGAACATCCTCGGGTGTTCGTGTGCGCAGGACGGCTACTTGCTGAGCATGGTTGTCCTTATCGTCCTCAAGGTGCTGGCGTGGTATGCTGCCGCAGCCGGCACTCAGTGCCCCTCGGCGGCGGTGGGTGGAAATAACAGCAGCGA---------CAGCAGCGGTAGCA-GCCGGAGCA--GCAGCAGCAGTAGCAACAGTCCCACCACCGTTTCCGAAGAGCGCGTGCTGCATGTACCTAGTCTGGTGGGCGGGCATTGTGTGGATGAGGAAGACCAGCCGCGAGTCGCGGCACAGCTCGTTCTGAGCGAACTGCACCGAGTCCAATCGCTGGTGAATCTATTGGCCAAGCGCCTGCAAGA-------------------------------------AGGCGGAGACGACGCAGCAGGGATGCCGGCGCACCATCCAGCG-----------------------------TCCCCTTTCTCCCTCCTCGGGTTTAGTGGGCTCGAGGCGAATCTCCGCCACCGCTTGCGCGCCGTGTCCTCAAACATTATTAATTTCCTGCAGCAAGAATGA Aspergillus_nomius_NRRL29212 ------------CATCCACCACCTCCGCCTCAATCGGATCAACCACCACAC-------GCTCTGCCCACCCCCAATGGTAGCGGTAGCGTCTC-AGCCATCTTTTCCCATCAGAGCCCCCCGCTACCCTTGGAGGCCCAGGGGC-------TGGGGGGAGAGTTGTCT-GGTCAGGAGCAAGGCACCCTGTCTTCGCTAACGGTCGA---TTCGGAATTTGGGGACTCTTTGCATTCCATCGATCACGGAAACCATGCCGATTTCTTGGCGGAGCCGACGGGGAGTCTTTTCGACGCCTTCTTGGAAGTGGGGACTCCC--ATGATCGACCCGTTCCTCGAGTCGGCACCAGTACCGCCGTTTGAA-ACGCGCTATTGCTGCTTTTCGCTGGCACTACAAACGCTGACCCACCTCTTCCCCCACGCCCCGCTGGGCTGTCAGCTACGGCTGACGGGTGGCGAGGATAGCTCGTGCAACCTGACGACGATCGACATGGTCCTCTCGGGGAACAAGAAGGCGACCGATGTGGTCCGGAACATCCTCGGGTGTTCGTGTGCGCAGGACGGCTACTTGCTGAGCATGGTTGTCCTTATCGTCCTCAAGGTGCTGGCGTGGTATGCTGCCGCAGCCGGCACTCAGTGCCCCTCGGCGGCGGTGGGTGGAAATAACAGCAGCGA---------CAGCAGCGGTAGCAAGCCGGAACAA-GCAACAGCAGTAGCAAAAAT------------TCCCAACAACGTGT--------------------TAAGCCGGAATC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Aspergillus_ochraceoroseus ACTCCC------CATACACCGGCT--ACCACTGCCCGAACCTCCCCCAAGTTAGACCATTTACGCTCTCCCCCCGAGGAAACCGAGCTCTGGAACTCAATTTTGTCTC-CCAATGCCAGCAATTGTACA----GATCTATCCTCTCTCCTCTCCTTGAACACCGATATTGGACAGCTCTTTGCCTCACTATCGCCCCCGAGTCTGGA---CACAGATGCGGTGGATAC--CGATCTGCACC---GGCATGGGATG-GCAGACCTATCGGTGG--CCGATGCCGCATCCGCCTCCTTTATGCAGGATATCA------CCGGGACGGCTGCTCTGTCATCCGGGTCCTCT----------TTTCCCAACACGCATCCTTGCTGTTTGACCATCTGCTTGGAAATCCTGATGCGGCTATTCCCGAATGCCCCCGTTGGCTGCCAA---CGGC---CCGGGAGCGAAGACGAGCCTAGTAAACTCTGCACGATTGAGTCGGTTATTGCGGATAATAAACAGATTATGGACACGATCCAGACCGTATTGGAGTGCCGCTGCGCACAGGATGAGTATGTCGTGACGCTCGTGTCCCTCATTGTCCTCAAGGTGATGGGTTGGTATGTCGCTGCTGCTCGGGACCGGC---CCTCGGGTGCAGTCCGCGACGGGGGTATGGATTG--------GGAGGGCGGGCTGCA-------------------CAGTCGTCGACCTTCCTCCTCCTCGTTTGACGAGGAGGTGCTGCATTTGCCCACGATTATTGGCGGATACTGCATTGATGGCCATCATCAGAGCCGTATGGCCGCCCAGCTGGTGCTCAGTGAACTACACCGCGTCCAGCGGCTGGTAACGCTGGTGGGACGTAGGTTTGAAGTTCTGAGACAGCGTCCCTTTAGTCAAGACTCTTCTGCGAGCTCCAGCTCGGCCGCCAGCAGTGTGCTGGACTCTGGCGGCCCATTGCCTATGCTCCCCGGTCCGGGGATATCGCCCCTGTCATCCAACACTTTGTCTCATTTGGAGGACGATCTGCGCAGACGATTCCGGGCAGTCTCCTCGGAAACAATTGAAATTTTGCGCCGTGCATAA Aspergillus_parasiticus_ATCC26691 ------------CATCCACAATCTCATCCTCAATCGAATCAACCACCACAC-------GCTCTGCCCACCCCCAATGGTAGCAGTAGCGTCTC-CGCCATCTTTTCTCTCCAGAGTCCCCCGCCACTCGTGGAGACCCAGGGCC-------TTGGAGGAGATCTGGCT-GGTCAGGCGCAAAGCACCCTGTCTTCCCTAACAGTCGA---TTCGGAATTCGGGGGGTCTTTGCAGTCAATGGAACACGGAAACCATGCCGATTTCTTGGCTGAGTCGACGGGGAATCTTTTCGACGCGTTTTTGGAAGTGGGAACCCCC--ATGATCGACCCGTTCCTCGAGTCGGCCCCACTGCCACCGTTTCAG-GCGCGCTATTGCTGCTTTTCGCTAGCACTACAAACACTGACCTGCCTCTTCCCCCACGCCCCGCTGGGCTGTCAGCTGCGGCTGACGGACGGTGAGGACAGTTCGTGCAACCTGATGACGACTGATATGGTCATCTCGGGGAACAAGAAGGCTACCGATGCGGTCCGGAAGATCCTCGGGTGTTCGTGCGCGCAGGATGGCTACTTGCTGAGCATGGTCGTCCTTATCGTTCTCAAGGTGCTGGGGTGGTATGCTGCGGCAGCAGGCACCCAGTGTACCTCAACGGCGGCGGGTGGAGAAACCAACAGTGG---------CAGCTGTAGCAACA-GTCCCGCCACCGTGTC--CAGTGGC---TGTC---------TGACGGAAGAGCGCGTGCTGCACCACCCTAGTATGGTGGGCGAGGATTGTGTGGATGAGGAAGACCAGCCGCGAGTGGCGGCACAGCTTGTTCTGAGCGAACTGCACCGAGTGCAGTCGCTGGTGAACCTATTGGCCAAGCGCCTGCAAGA-------------------------------------AGGTGGAGACGATGCAGCAGGGATACCGGCGCACCATCCAGCG-----------------------------TCCCCTTTCTCACTACTCGGTTTTAGTGGCCTCGAAGCAAATCTCCGCCAACCTTTGCGCGCCGTGTCCTCCGACATTATTGATTACCTGCATCGAGAATGA Aspergillus_parasiticus_ATCC56775 ------------CATCCACAATCTCATCCTCAATCGAATCAACCACCACAC-------GCTCTGCCCACCCCCAATGGTAGCAGTAGCGTCTC-CGCCATCTTTTCTCACCAGAGTCCCCCGCCACTCGTGGAGACCCAGGGCC-------TTGGAGGAGATCTGGCT-GGTCAGGCGCAAAGCACCCTGTCTTCCCTAACAGTCGA---TTCGGAATTCGGGGGCTCTTTGCAGTCAATGGAACACGGAAACCATGCCGATTTCTTGGCTGAGTCGACGGGGAGTCTTTTCGACGCGTTTTTGGAAGTGGGGACCCCC--ATGATCGACCCGTTCCTCGAGTCGGCCCCACTGCCACCGTTTCAG-GCGCGCTATTGCTGCTTTTCGCTAGCACTACAAACACTGACCTGCCTCTTCCCCCACGCCCCGCTGGGCTGTCAGCTGCGGCTGACGGACGGTGAGGACAGTTCGTGCAACCTGATGACGACTGATATGGTCATCTCGGGGAACAAGAAGGCTACCGATGCGGTCCGGAAGATCCTCGGGTGTTCGTGCGCGCAGGATGGCTACTTGCTGAGCATGGTCGTCCTTATCGTTCTCAAGGTGCTGGGGTGGTATGCTGCGGCAGCAGGCACCCAGTGTACCTCAACGGCGGCGGGTGGAGAAACCAACAGTGG---------CAGCTGTAGCAACA-GTCCCGCCACCGTGTC--CAGTGGC---TGTC---------TGACGGAAGAGCGCGTGCTGCACCACCCTAGTATGGTGGGCGAGGATTGTGTGGATGAGGAAGACCAGCCGCGAGTGGCGGCACAGCTTGTTCTGAGTGAACTGCACCGAGTGCAGTCGCTGGCGAACCTATTGGCCAAGCGCCTGCAAGA-------------------------------------AGGTGGAGACGATGCAGCAGGGATACCGGCGCACCATCCAGCG-----------------------------TCCCCTTTCTCACTACTCGGTTTTAGTGGCCTCGAAGCAAATCTCCGCCACCGCTTGCGCGCCGTGTCCTCCGACATTATCGATTACCTGCATCGAGAATGA Aspergillus_pseudotamarii_NRRL25517 ------------CATCCACAACCTCAGCCTCAATCGGATCAACCACCAAAC-------GCTCTGCCCACCCCCAATGGCAGCAGTAGTGTCTC-CGCCATTGTTTCTCATCAGAGTCCCCGGCTCCCCTCGGAGACCCAGGGCC-------TTGGAGGAGATTCGTCT-GGTCAGGATCAAGGTACCCTGTCTTCCCTAGCGGTTGG---TTCGGACTTTGGAGACTCTCTGCAGTCAATCGATCACGGAAACCATCCCGATTTCTTGGCTGAGCCGACGGGGAGTCTTTTCGACGCGTTTTTGGAAGTGGGGACCCCC--ATGATCGACCCATTCCTCGAGTCGGCCCCATTACCGTTGTGTCAG-GCACGTTCTTGCTGCTTTTCGCTAGCACTCCAAACATTGACCCACCTCTTCCCTCATGCCCCGCTGGGCTGTCAGCTACGGCTGACGGACAGCGAGGACAGCTCGTGTAACCTAACGACGATCGACATGGTCATCTCGGGCAATAAGCAGGCTACCGATGCGGTCCGGAAGATCCTCGGGTGCTCGTGCGCGCAGGATGGCTACTTGCTGAGCATAATTGTCCTGATCGTTCTTAAAGTGCTGGGGTGGTATGCTGCCGCAGCAGGCACCCAGTGCCCCTCGTCGGCGGTGGGTGGAAATACCAGCAGCGGTAGCAGCAGCAGCTGTGGCAACA-GTCCCGCCACCGTGTC--CAGTAAC---CGTC---------TGTCGGAAGAGCGTGTACTGCATCTACCTAGTATGGTGGGTGAGCATTGTGTGGAAGAGGAAGACCAGCCGCGAGTCGCGGCCCAGCTCGTTCTGAGCGAACTGCACCGAGTCCAGTCGTTGGTGAACCTATTGGCCAAGCGCCTGCAAGA-------------------------------------AGGCGGAGACGATGCAGCAGCGATAACTTCGCACCATCCAGCG-----------------------------TCCCCTTTCGCACTACTCGGATTTAGTGGACTCGAGGCAAATCTCCGCCACCGCTTGCGTGTCGTGTCCGCCGACATCATTGATTTCCTGCATCGAGAATGA Aspergillus_pseudotamarii_NRRL443 ------------CATCCACAACCTCAGCCTCAATCGGATCAACCACCAAAC-------GCTCTGCCCACCCCCAATGGCAGCAGTAGTGTCTC-CGCCATTGTTTCTCATCAGAGTCCCCGGCTCCCCTCGGAGACCCAGGGCC-------TTGGAGGAGATTCGTCT-GGTCAGGACCAAGGTACCCTGTCTTCCCTAGCGGTTGA---TTCGGACTTTGGAGACTCTCTGCAGTCAATCGATCACGGAAACCATACCGATTTCTTGGCTGAGCCGACGGGGAGTCTCTTCGACGCGTTTTTGGAAGTGGGGACCCCC--ATGATCGACCCATTCCTCGAGTCGGCCCCATTACCGTTGTGTCAG-GCACGCTCTTGCTGCTTTTCGCTAGCACTCCAAACATTGACCCACCTCTTCCCTCACGCCCCGCTGGGCTGTCAGCTACGGCTGACGGACGGCGAGGACAGCTCGTGTAACCTAACGACGATCGACATGGTCATCTCGGGGAATAAGCAGGCTACCGATGCGGTCCGGAAGATCCTCGGGTGCTCGTGCGCGCAGGATGGCTACTTGCTGAGCATAGTTGTCCTGATCGTTCTCAAAGTGCTGGGGTGGTATGCTGCCGCAGCAGGCACCCAGTGCCCCTCGTCGGCGGTGGGTGGAAATACCAGCAGCGGTAGCAGCAGCAGCTGTGGCAACA-GTCCCGCCACCGTGTC--CAGTAAC---CGTC---------TGTCGGAAGAGCGTGTACTGCATCTACCTAGTATGGTGGGTGAGCATTGTGTGGAAGAGGAAGACCAGCCGCGAGTCGCGGCCCAGCTCGTTCTGAGCGAACTGCACCGAGTCCAGTCGTTGGTGAACCTATTGGCCAAGCGCCTGCAAGA-------------------------------------AGGCGGAGACGATGCAGCAGCGATAACTTCGCACCATCCAGCG-----------------------------TCCCCTTTCGCACTACTCGGATTTAGTGGACTCGAGGCAAATCTCCGCCACCGCTTGCGTGTCGTGTCCGCCGACATCATTGATTTCCTGCATCGAGAATGA Aspergillus_versicolor GCTGTCACCGCACATTCACCAGCT--ATCACAACCAGACCTTCACCCAAGCCAACACATCTGCAGTCCCCGCCGAGCGACTCTGAATTGTGGAACGCAATTCTCTCGC-CGAATGCATCCAGCTCCACC----GATCTCTCGTCCCTCCTCTCCGTGAACACCGATATCGGGCAACTGTTTGCCTCCCTATCTCCTTCGCAGCTCGATGGCCCCGATAACATGGATAC--CGACCTGCATG---CGCATGGGTTG-GGCGAACTATCGGTCG--CCGATCC---ATCCTCCTCTCTCATGCACGA-ATTGGAGGGCCCGGAACG-CCTCCC-GCTGCCCGACTCGG------------CGGCAAAG-GCTCATCCTTGTTGTTTGGCACTCTGCTTGGACATTCTCATGCGACTGTTTCCGAATGCGCAGGCCAGCTGCGAG---AGGC---CTGGTAGTCAGGACGGGCCCGGGAAGTTTTGCACGATTGAGTCAGTCATCGAGGACAACAAGCAGATCCTGGGCACGGTCCAGACGGTGCT-----------------AGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ; END; BEGIN CODONS; CODONPOSSET * CodonPositions (CHARACTERS = aflR) = N: 1-1105; CODONPOSSET CodonPositions (CHARACTERS = aflR) = N: 1-1105; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M534] TITLE beta_tubulin; LINK TAXA = Taxa4; DIMENSIONS NCHAR=496; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Aspergillus_alliaceus TATGCCTCGAT-----GCCCCCGAGTCAATATGCTTTGG--ACGTAGGGCCTCAGCAGAAACATGAGCTCGGATATATCATTCTCGTGTCTGACACGTGTTTGCTAATACCTTTGCAGGCAGACCATCTCCGGGGAGCACGGCCTCGACGGCTCCGGTGTGTAAGTACAACCCGTGT--ACACCT--------------CGAACGAACGACGACCAGATGG-CAT--TGGAAGAGTTTCGGATGGGTCTGACAGGAAG-GATAGTTACAATGGCTCCTCCGATCTCCAGCTGGAGCGCATGAACGTCTACTTCAACGAGGTGCGT-ACCTCAAATTTTTCAGCCGC--------TATA-AAAACGCTTTGCA---AGTCCTGACC---GCT--------TCTCCAGGCCAGCGGAAACAAGTATGTCCCTCGTGCCGTCCTCGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGTGCCGGTCCCTTCGGTCAG Aspergillus_bombycis TATGTCTCGAT-----GTCTCCGAGTCAATATGCTTTGG--ACCCAGGACCTCAGCAGAAACATGAGCTTGGATGTATCAT-ATCGTGTCTGACACGTGTTTGCTAATATCTTTGCAGGCAGACCATCTCCGGCGAGCACGGCCTCGACGGCTCCGGTGTGTAAGTACAACCCGTGT--ACAACT--------------CGAACGAATGACGACCAGATGGGCAT--TGGAAGAGTTT-GAATGGGTCTGACGGGAAG-GATAGTTACAATGGCTCCTCCGATCTCCAGCTGGAGCGCATGAACGTCTACTTCAACGAGGTGCGT-ACCTCAAAATTTTCAGCCTC--------TATG-AAAACGCTTTGCA---AGTCCTGACC---GCT--------TCTCCAGGCCAGCGGAAACAAGTATGTCCCTCGTGCCGTCCTCGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGTGCCGGTCCCTTCGGTCAG Aspergillus_flavus TATGTCTCAAT-----GCCTTCGAGTTAGTATGCTTTGG--ACCAAGGAACTCCTCAAAAGCATGATCTCGGATGTGTCCT-GTTATATCTGCCACATGTTTGCTAACAACTTTGCAGGCAAACCATCTCTGGCGAGCACGGCCTTGACGGCTCCGGTGTGTAAGTACAGCCTGTAT--ACACCT--------------CGAACGAACGACGACCATATGG-CAT--TAGAA--GTTG-GAATGGATCTGACGGCAAG-GATAGTTACAATGGCTCCTCCGATCTCCAGCTGGAGCGTATGAACGTCTACTTCAACGAGGTGCGT-ACCTCAAAATTT-CAGCATC--------TATG-AAAACGCTTTGCA---ACTCCTGACC---GCT--------TCTCCAGGCCAGCGGAAACAAGTATGTCCCTCGTGCCGTCCTCGTTGATCTTGAGCCTGGTACCATGGACGCCGTCCGTGCCGGTCCCTTCGGTCAG Aspergillus_fumigatis TATGTCTTGACCTCAAAGCTTGGATGACGGGTGATTGGG--ATCTCTCATCTTAGCAGGCT-----ACCTCCATGGGTTCAGCCTCACTGTCATGGGTATCAGCTAACAAATCTACAGGCAGACCATCTCTGGTGAGCATGGCCTTGACGGCTCTGGCCAGTAAGTTCGACCTATATC--CTCCCAA-----------TTGAGAAAGCGGCGGAAACACGGAAAACAAGGAAGAAGCGGACGCGTGTCTGATGGGAAATAATAGCTACAATGGCTCCTCCGATCTCCAGCTGGAGCGTATGAACGTCTATTTCAACGAGGTGTGT--GGATGAAACTCTTGATTTATACT---ATTTCGGCAACATCTCACGA-----TCTGACTC--GCTA----------CTAGGCCAACGGTGACAAATATGTTCCTCGTGCCGTTCTGGTCGATCTCGAGCCTGGTACCATGGACGCTGTCCGTGCCGGTCCCTTCGGCGAG Aspergillus_nidulans TGAG-C--GAA-----AATTTC------ACCTTTTTGGA------ATGATTTCTTT------------CTTCGTACACCT----------------------GCTAACAAGCCAACAGGCAGACCATCTCCGGTGAGCACGGCCTCGATGGCTCCGGTGTGTGAGTACAATCCGTCCA-GCATCCGC------------TGAAAACACGACACCTCAACAG------------AACC-----------TGACACAACC---CAGTTACAATGGTACCTCCGACCTTCAACTCGAGCGTATGAACGTCTACTTCAATGAGGTCAGT--GGATGAGATATCAGGTAGCA--------GTTTGGTGTG-------------TCTGACT-----T--------CGTCCAGGCCAGCGGTAACAAGTACGTTCCCCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACTATGGATTGCGTCCGCGCCGGTCCCTTCGGCGAG Aspergillus_nomius_NRRL13137 TATGTCTCGAT-----ACCTCCGAGTCAATATGCTTTGG--ACCTAGGGCCTCAGCAGAAACATGAGCTCGGATATATCAT-CTCGTGTCTGACACGTGTTTGCTAATACCTTTGCAGGCAGACCATCTCCGGCGAGCACGGCCTCGACGGCTCCGGTGTGTAAGTACAACCCGCGT--ACACCT--------------CGAATGAACGACGATCAGATGG-CAT--TGGAAGAGTTTTGGATGGGTCTGACGGGAAG-GATAGTTACAATGGCTCCTCCGATCTCCAGCTGGAGCGCATGAACGTCTACTTCAACGAGGTGCGT-ACCTCAAATTTTTCAGCCGC--------TATA-AAAACGCTTTGCA---AGTCCTGACC---GCT--------TCTCCAGGCCAGCGGAAACAAGTATGTCCCTCGTGCCGTCCTCGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGTGCCGGTCCCTTCGGTCAG Aspergillus_nomius_NRRL25393 TATGTCTCGAT-----ACCTCCGAGTCAATATGCTTTGG--ACCTAGGGCCTCAGCAGAAACATGAGCTCGGATATATCAT-CTCGTGTCTGACACGTGTTTGCTAATACCTTTGCAGGCAGACCATCTCCGGCGAGCACGGCCTCGACGGCTCCGGTGTGTAAGTACAACCCGCGT--ACACCT--------------CGAATGAACGACGATCAGATGG-CAT--TGGAAGAGTTTTGGATGGGTCTGACGGGAAG-GATAGTTACAATGGCTCCTCCGATCTCCAGCTGGAGCGCATGAACGTCTACTTCAACGAGGTGCGT-ACCTCAAATTTTTCAGCCGC--------TATA-AAAACGCTTTGCA---AGTCCTGACC---GCT--------TCTCCAGGCCAGCGGAAACAAGTATGTCCCTCGTGCCGTCCTCGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGTGCCGGTCCCTTCGGTCAG Aspergillus_ochraceoroseus TACGTCCCAAT-------TTT--------CATCTTT------------ATTTCCCC-----------CCCTCAT--------ATTTTGTC-AACA------TGCTAACAACCAAATAGGCAGACTATCTCTGGTGAACACGGCCTGGATGGCTCCGGTGTGTGAGTACAACCTGTGT--GCAGCT--------------TCGACAAAAAA-----AAATAATCAT--AAAGAGAACGT-GAA---GTCTGATGG-ATG-GATAGTTACAATGGCTCCTCTGACCTCCAGTTGGAGCGTATGAACGTCTACTTCAACGAGGTGCGTGGTCATGA---TTCTAGTCTAC-------TGTC-AAGATGGC---CA------CCTAATTA--AAT----------TATAGGCCAGCGGAAACAAGTACGTTCCTCGTGCCGTCCTCGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGTGCTGGCCCCTTCGGTCAG Aspergillus_ochraceus TAAGTCT--AC-----ACGTTGGCATTGGCA-GTCTGGGCTATCTGAGATCATCTTTGATACCTTGGCGCTTGTGACGCTCAATCCTA---GATACTTGTTTACTGATAGGTGAATAGGCAAAACATCTCTGGCGAGCACGGCCTTGACGGCGCCGGTGTGTAAGTACATCCCGCGTTTACACCTATCGAAATCAGAATCGAAGAGAGAAGAAATAAACGACCAT--GGTGAGAGATT-GATTG--TCTGATGGGATG-AACAGTTACAATGGCTCCTCCGACCTTCAGCTGGAGCGCATGAACGTCTACTTCAACGAGGTTCGTTGCCCGAAAATTTTCTATCTCCCTTCACCTATCCGAAACGCCCCGTACAAAGCTCTAACCCACGCTCTCTTCATTTTTTAGGCTTCCGGTGGCAAGTATGTTCCCCGTGCCGTTCTGGTCGATCTTGAGCCCGGTACCATGGACGCTGTCCGTGCCGGTCCCTTCGGTCAG Aspergillus_parasiticus TATGTCTCGAT-----ACCTTCGAGTTAATATGCTTTGG--ACCAAGGAACTCCTCAAAAGCATGATCTCGGATGTGTCCT-ATTATATCTGCCACGTGTTTGCTAACAACTTTGCAGGCAAACCATCTCTGGCGAGCACGGCCTTGACGGCTCCGGTGTGTAAGTACAGCCTGTAT--ACACCT--------------CGAACGAACGACGACCATATGG-CAT--TAGAA--GTTG-GAATGGATCTGACGGCAAG-GATAGTTACAATGGCTCCTCTGATCTCCAGCTGGAGCGTATGAATGTCTACTTCAACGAGGTGCGT-ACCTCAAAATTTTCAGCATC--------TATG-AAAACGCTTTGCA---ACTCCTGACC---GCT--------TCTCCAGGCCAGCGGAAACAAGTATGTCCCTCGTGCCGTCCTCGTCGATCTTGAGCCTGGTACCATGGACGCCGTCCGTGCCGGTCCCTTCGGTCAG Aspergillus_pseudotamarii_NRRL25517 TATGTCTCGAT-----GCTTTCGAGTTAATATGCTTTGG--ACCAAGGAACTTCACAGAAGCATGAACTCGGATGTGCCCT-ATTGCGT-----------TTGCTAACATCCTTGCAGGCAGACCATCTCTGGCGAGCACGGCCTTGACGGCTCCGGTGTGTAAGTACAGTCCGTGT--ACACCT--------------CGAACGAACGACGAGCAGATGG-CAT--TGGAAGAGTTG-GAATGGGTCTGACGGGAAG-GATAGTTACAATGGCTCCTCTGATCTCCAGCTGGAGCGTATGAACGTCTACTTCAACGAGGTGCGT-ACCTCAAATTTTTCAGCCTC--------TATG-AAAACGCTTTGCA---AGTCCTGACC---GCT--------TCTCCAGGCCAGCGGAAACAAGTATGTCCCTCGTGCCGTCCTCGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGTGCCGGTCCCTTCGGTCAG Aspergillus_pseudotamarii_NRRL443 TATGTCTCGAT-----GCCTTCGAGTTAATATGCTTTGG--ACCAAGGAACTTCACAGAAGCATGAACTCGGATGTGCCCT-ATTGCGT-----------TTGCTAACATCCTTGCAGGCAGACCATCTCTGGCGAGCTCGGCCTTGACGGCTCCGGTGTGTAAGTACAGTCCGTGT--ACACCT--------------CGAACGAACGACGAGCAGATGG-CAT--TGGAAGAGTTG-GAATGGGTCTGACGGGAAG-GATAGTTACAATGGCTCCTCTGATCTCCAGCTGGAGCGTATGAACGTCTACTTCAACGAGGTGCGT-ACCTCAAATTTTTCAGCCTC--------TATG-AAAACGCTTTGCA---AGTCCTGACC---GCT--------TCTCCAGGCCAGCGGAAACAAGTATGTCCCTCGTGCCGTCCTCGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGTGCCGGTCCCTTCGGTCAG Aspergillus_tamariiNRRL20818 TATGTCTCGAT-----GCTTTCGAGTTAATATGCTTTGG--ACCAAGGAACTGCACAGAAGCATGAACTCAGATGTGCCCT-ACTGTGTCTGCCACGTGTTTGCTAACATCTTTGCAGGCAGACCATCTCTGGCGAGCACGGCCTTGACGGCTCCGGTGTGTAAGTACAATCCGTGT--ACACCT--------------CGAACGAACGACAACCAGATGG-CAT--TGGAAGAGTTG-GAATGGGTCTGACGGGAAG-GATAGTTACAATGGCTCCTCCGATCTCCAGCTGGAGCGGATGAACGTCTACTTCAACGAGGTGCGT-ACCTCACATTTTTCAGCCTC--------TTTG-ACAACGCTTTGCA---AGTCCTGACC---GCT--------TCTCCAGGCCAGCGGAAACAAGTATGTCCCTCGTGCCGTCCTTGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGTGCCGGTCCCTTCGGTCAG Aspergillus_tamariiNRRL25565 TATGTCTCGAT-----GCTTTCGAGTTAATATGCTTTGG--ACCAAGGAACTGCACAGAAGCATGAACTCAGATGTGCCCT-ACTGTGTCTGCCACGTGTTTGCTAACATCTTTGCAGGCAGACCATCTCTGGCGAGCACGGCCTTGACGGCTCCGGTGTGTAAGTACAATCCGTGT--ACACCT--------------CGAACGAACGACAACCAGATGG-CAT--TGGAAGAGTTG-GAATGGGTCTGACGGGAAG-GATAGTTACAATGGCTCCTCCGATCTCCAGCTGGAGCGTATGAACGTCTACTTCAACGAGGTGCGT-ACCTCACATTTTTCAGCCTC--------TTTG-ACAACGCTTTGCA---AGTCCTGACC---GCT--------TCTCCAGGCCAGCGGAAACAAGTATGTCCCTCGTGCCGTCCTTGTCGATCTTGAGCCCGGTACCATGGACGCCGTCCGTGCCGGTCCCTTCGGTCAG Aspergillus_versicolor TGCGTC--GAA-----AATTTC------ATCCATTTCAG------ATGGTATTTCC------------TTTGGTGCTTTTT---------------------GCTAACGACCCTATAGGCAGACCATCTCCGGCGAGCACGGCCTTGATGGCTCCGGTGTGTGAGTACAACCCGTCCA-AGACTCGA------------TCAAAACACGAC---CGAACAC------------AACCC---------CTGATATAATC---CAGTTACAATGGTACCTCCGACCTCCAGCTCGAGCGTATGAACGTCTACTTCAACG---------------------------------------------------------------------------------------AGGCCAGCGGCAACAAGTACGTTCCCCGTGCCGTTCTCGTCGATCTCGAGCCCGGTACTATGGACGCTGTCCGTGCCGGTCCCTTCGGTCAG ; END; BEGIN CODONS; CODONPOSSET * CodonPositions (CHARACTERS = beta_tubulin) = N: 1-496; CODONPOSSET CodonPositions (CHARACTERS = beta_tubulin) = N: 1-496; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M533] TITLE nor1; LINK TAXA = Taxa1; DIMENSIONS NCHAR=312; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Aspergillus_alliaceus GATGATCGTGGTGCAGCTGGACTGCAACTCGGAAACCGATGCCCAGACAGCCGTCCAAACCCTGCGGGAGGAACACGGGGTGACGCACTTGGACGTGGTAGTTGCCAATGCGGCCATGGCGACGAACTTTGGGCCCGCGTCCACCATGCCTCTCGAACATCTCCAGGCGCACATGATGGTCAACATGTATGCTCCGGTCCTCCTGTTTCAGGCAACCCGCCTGATGCTGCA----------GCAGTC--CAAGCAACAGGCCAAGTTTGTCTTGATCGGTGCCCCAATCAGCACCATCACCAACATGCACGA Aspergillus_bombycis_NRRL25593 GATGATAGTGGTGCAGCTGGACTGCAACTCGGAAACCGACGCCCAGACAGCCGTCCAAACCCTGCGGGAAGAGTACGGGGTGACGCACTTGGACGTGGTGGTTGCCAATGCGGCCATGGCGACGAACTTTGGGCCCGCGTCCACTATGCCTCTCGAACATCTCCAGGCGCACATGATGGTCAATATGTATGCTCCCGTCTTGCTGTTTCAGGCAACCCGCCTGATGCTGCA----------GCAGTC--CAAGCAACAGGCCAAGTTTGTCTTGATCGGCGCCCCGATCAGCACCATCACCAACATGCACAA Aspergillus_bombycis_NRRL28900 GATGATAGTGGTGCAGCTGGACTGCAACTCGGAAACCGACGCCCAGACAGCTGTCCAAACCCTGCGGGAAGAGCACGGGGTGACGCACTTGGACGTGGTGGTTGCCAATGCGGCCATGGCGACGAACTTTGGGCCCGCGTCCACTATGCCTCTCGAACATCTCCAGGCGCACATGATGATCAATATGTATGCTCCCGTCTTGCTGTTTCAGGCAACCCGCCTGATGCTGCA----------GCAGTC--CAAGCAACAGGCCAAGTTTGTCTTGATCGGCGCCCCGATCAGCACCATCACCAACATGCACAA Aspergillus_caelatus GATGATTGTGGTGCAGCTGGACTGCAACTCGGAAACCGATGCTCAGACTGCTGTCCAGACCCTTCGGGAGGAGCACGGGGTCACGCACTTGGACGTGGTGGTTGCCAATGCGGCCATGGCGACGAACTTTGGGCCCGCGTCCACCATGCCTCTCGAGCATCTCCAGGCGCACATGATGGTCAACATGTATGCTCCCATCTTACTGTTTCAGGCAACCCGCCTGATGCTGTA----------ACAGTC--CAAGCAACAGGCCAAGTTTGTCTTGATCGGCGCCCCGATCAGCACCATCACCAACATGCACGA Aspergillus_flavus GATGATCATAGTGCAGCTTAACTGCGACTCGGAAACTGATGCCCAGGCAGCCGTCCAGACATTGCGGGAGGAGCACGGGGTGACGCACTTGGACGTGGTGGTTGCCAATGCGGCCATGGCGACGAACTTTGGGCCCGCGTCCACCATGCCCCTCGAGCATCTCCAGGCACACATGATGGTCAACATGTATGCTCCCGTCCTACTGTTTCAGGCAACCCGCCTGATGCTGCA----------GCAGTC--CAAGCAACAGGCCAAGTTTGTCTTGATCGGCGCCCCGATCAGCACCATCACCAACATGCACGA Aspergillus_nidulans GCTGATCGCAGTCCAACTGGACAGTGGATCGAAGTCCGATCCCGCCGACGCGGTCAGCATTCTCCAGCGCGATTACGGCATTACGCATCTCGATGTAGTGATCGCGAACGCAGCTATTGCGGCCAACTACGGTCCAGCCTCGACCATGCCTCTCGAGTATCTGGAGACTCACATGCAGATTAACGCATACGCGGCCCTGCTACTGTTCCAGGCGACTAGGGTCCTTCTCC---------AGGCCGCCA------AATCGCCGCAGTTCATCTGCGTCGGGGCCCCGATTAGCACGATTACCGAGATGGAGAG Aspergillus_nomius_NRRL13137 GATGATCGTGGTGCAACTGGACTGCAACTCGGAAACCGATGCCCAGACAGCCGTCCAAACCCTGCGGGAGGAACACGGGGTGACGCACTTGGACGTGGTAGTTGCCAATGCGGCCATGGCGACGAACTTTGGGCCCGCGTCCACCATGCCTCTCGAACATCTCCAGGCGCACATGATGGTCAACATGTATGCTCCGGTCCTCCTGTTTCAGGCAACCCGCCTGATGCTGCA----------GCAGTC--CAAGCAACAGGCCAAGTTTATCTTGATCGGTGCCCCAATCAGCACCATCACCAACATGCACGA Aspergillus_nomius_NRRL29212 GATGATCGTGGTGCAACTGGACTGCAACTCGGAAACCGATGCCCAGACAGCCGTCCAAACCCTGCGGGAGGAACACGGGGTGACGCACTTGGACGTGGTAGTTGCCAATGCGGCCATGGCGACGAACTTTGGGCCCGCGTCCACCATGCCTCTCGAACATCTCCAGGCGCACATGATGGTCAACATGTATGCTCCGGTCCTCCTGTTTCAGGCAACCCGCCTGATGCTGCA----------GCAGTC--CAAGCAACAGGCCAAGTTTATCTTGATCGGTGCCCCAATCAGCACCATCACCAACATGCACGA Aspergillus_ochraceoroseus ACTGATTGTCCTACAGCTGGACTGTACTTCCCAGTCTGACGCCGACGAAGCCATTGCGACGCTCAAGCAAGAATATGGCCTCACGTATCTCGATGTAGTGATCGCGAATGCCGCGATCGCCGCCAACTACGGCCCCGCGTCGACCATGCCGCTGGAGCATCTCGAAGCCCATATGAAAGTCAACGCCTACGCCGTCCTGCTGCTCTTCCAGGCCACGCGACTCCTGCTGCAAG------AGGCAGCCTCCTACCACCCTCCACAGTTCATTCTGATCGGGGCGCCCATCAGCACCATTACCGAGATGGAAGG Aspergillus_parasiticus GATGATCATAGTGCAGCTTAACTGCGACTCGGAAACTGATGCCCAGGCAGCCGTCCAGACATTGCGGGAGGAGCACGGGGTGACGCACTTGGACGTGGTGGTTGCCAATGCGGCCATGGCGACGAACTTTGGGCCCGCGTCCACCATGCCCCTCGAGCATCTCCAGGCGCACATGATGGTCAACATGTATGCTCCCGTCCTACTGTTTCAGGCAACCCGCCTGATGCTGCA----------GCAGTC--CAAGCAACAGGCCAAGTTTGTCTTGATCGGCGCCCCGATCAGCACCATCACCAACATGCACGA Aspergillus_pseudotamarii_NRRL25517 GATGATCGTGGTACAGCTGGACTGCAACTCGGAAACCGATGCTCAGACTGCTGTTCAGACCCTTCGGGAAGAGCACGGGGTCACGCACTTGGACGTGGTGGTAGCCAATGCGGCCATGGCGACGAACTTTGGGCCCGCGTCCACCATGCCTCTCGAGCATCTCCAGGCGCACATGATGGTCAACATGTATGCTCCCGTCTTACTGTTTCAGGCAACCCGCCTGATGCTGGA----------ACAGTC--CAAGCAACAGGCCAAGTTTGTCTTGATCGGCGCCCCGATCAGCACCATCACCAACATGCACGA Aspergillus_pseudotamarii_NRRL443 GATGATCGTGGTACAGCTGGACTGCAACTCGGAAACCGATGCTCAGACTGCTGTTCAGACCCTTCGGGAAGAGCACGGGGTCACGCACTTGGACGTGGTGGTAGCCAATGCGGCCATGGCGACGAACTTTGGGCCCGCGTCCACCATGCCTCTCGAGCATCTCCAGGCGCACATGATGGTCAACATGTATGCTCCCGTCTTACTGTTTCAGGCAACCCGCCTGATGCTGGA----------ACAGTC--CAAGCAACAGGCCAAGTTTGTCTTGATCGGCGCCCCGATCAGCACCATCACCAACATGCACGA Aspergillus_versicolor GCTGATACTCGTCCAGTTAGACTGCGCGTCTCGAACCGACCCCGAAGACGCAATTAAATTACTTCAGCAAGATCACGGACTGACCTATTTGGACGTCGTGATCGCGAACGCAGCCATCGCCGCAAACTACGGGCCAGCATCCACCATGCCTCTTGAGCACCTCGAAGCACACATGCAAATAAACGCTTACGCCGTCCTTCTTCTCTTCCAGGCCACCAGGCTCATGCTCCAAGCAGCAGGAGCAGAAAACAACAGACCACCGCAATTCATCTGCATTGGCGCACCAATCAGCACAATCACCGAGCTGGAAAG ; END; BEGIN CODONS; CODONPOSSET * CodonPositions (CHARACTERS = nor1) = N: 1-312; CODONPOSSET CodonPositions (CHARACTERS = nor1) = N: 1-312; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M535] TITLE 5.8S_ITS; LINK TAXA = Taxa2; DIMENSIONS NCHAR=460; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .] Aspergillus_alliaceus CCCA-ACCTCCCACCCGTGTATACTGTA-CCTTCGTTGCTTCGGCGGG---CCCGCCG--T-CATGGCCGCCGGGG-GGCTTCTGCCCCCGGGCCCGCGCCCGCCGGAGACAC-A---TGAACTC--TGT-CTGA-TCTAGTGAAGTCTGAGT-TGATT-GTCACACAATCAGTTAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAACTAATGTGAATTGCAGAATTCCGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCTGCCCATCAAGCACGGCTTGTGTGTTGGGTCCTCGTCCCCCCC----------GGGGGACGTGCCCGAAAGGCAGCGGCGGCACCGCGTCCGGTCCTCGAGCGTATGGGGCTTTGTCACCCGCTC Aspergillus_bombycis CCCA-ACCTCCCACCCGTGTTTACTGTA-CCTTAGTTGCTTCGGCGGG---CCCGCCG--T-CAAGGCCGCCGGGG-GGCATCAGCCCCCGGGCCCGCGCCCGCCGGAGACACCA---CGAACTC--TGT-CTGA-TCTAGTGAAGTCTGAGT-TGATT-GTATCGCAATCAGTTAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAACTAGTGTGAATTGCAGAATTCCGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCTGCCCATCAAGCACGGCTTGTGTGTTGGGTCGTCGTCCCCTCTTC------GGGGGGGACGGGCCCTAAAGGCAGCGGCGGCACCGCGTCCGATCCTCGAGCGTATGGGGCTTTGTCACCCGCTC Aspergillus_flavus CCCA-ACCTCCCACCCGTGTTTACTGTA-CCTTAGTTGCTTCGGCGGG---CCCGCCA--TTCATGGCCGCCGGGG-GCTCTCAGCCCC-GGGCCCGCGCCCGCCGGAGACACCA---CGAACTC--TGT-CTGA-TCTAGTGAAGTCTGAGT-TGATT-GTATCGCAATCAGTTAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAACTAGTGTGAATTGCAGAATTCCGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCTGCCCATCAAGCACGGCTTGTGTGTTGGGTCGTCGTCCCCTCTCC------GGGGGGGACGGGCCCCAAAGGCAGCGGCGGCACCGCGTCCGATCCTCGAGCGTATGGGGCTTTGTCACCCGCTC Aspergillus_fumigatus TCCA-ACTTCCCACC?GTGTCTATCGTA-CCTT-GTTGCTTCGGCGGG---CCCGC?GTTTCGACGGCCGCCGGGGAGGCTTGCGCCCCCGGGCCCGCGCCCGCCGAAGACCCCAACATGAACGC--TGTTCTGA-AAGTATGCAGTCTGAGT-TGAT---TATCGTAATCAGTTAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCTGCCC-TCAAGCACGGCTTGTGTGTTGGGCCCCCGTCCCCCTCTCC------CGGGGGACGGGCCCGAAAGGCAGCGGCGGCACCGCGTCCGGTCCTCGAGCGTATGGGGCTTTGTCACCTGCTC Aspergillus_nidulans CCCA-ACCTCCCACCCGTGACTACC-TAACACT-GTTGCTTCGGCGGGGAGCCCCC------------CAGGGGCG-------------------AGC---CGCCGGGGACCACT----GAACTTCATGC-CTGAGAGTGATGCAGTCTGAGCCTGA---ATACAA-A-TCAGTCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAACTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCTGCCC-TCAAGCCCGGCTTGTGTGTTGGGTCGTCGTCCCCCCCGG----------GGGACGGGCCCGAAAGGCAGCGGCGGCACCGTGTCCGGTCCTCGAGCGTATGGGGCTTTGTCACCCGCTC Aspergillus_nomius_NRRL13137 CCCA-ACCTCCCACCCGTGTTTACTGTA-CCTTAGTTGCTTCGGCGGG---CCCGCCG----CAAGGCCGCCGGGG-GGCATCCGCCCCCGGGCCCGCGCCCGCCGGAGACACCA---CGAACTC--TGA-ACGA-TCTAGTGAAGTCTGAGT-TGATT-GTATCGCAATCAGTTAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAACTAGTGTGAATTGCAGAATTCCGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCTGCCCATCAAGCACGGCTTGTGTGTTGGGTCGTCGTCCCCCCCTCCG----GGGGGGGACGGGCCCTAAAGGCAGCGGCGGCACCGCGTCCGATCCTCGAGCGTATGGGGCTTTGTCACCCGCTC Aspergillus_nomius_NRRL25393 CCCA-ACCTCCCACCCGTGTTTACTGTA-CCTTAGTTGCTTCGGCGGG---CCCGCCG----CAAGGCCGCCGGGG-GGCATCCGCCCCCGGGCCCGCGCCCGCCGGAGACACCA---CGAACTC--TGA-ACGA-TCTAGTGAAGTCTGAGT-TGATT-GTATCGCAATCAGTTAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAACTAGTGTGAATTGCAGAATTCCGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCTGCCCATCAAGCACGGCTTGTGTGTTGGGTCGTCGTCCCCCCCTCCG----GGGGGGGACGGGCCCTAAAGGCAGCGGCGGCACCGCGTCCGATCCTCGAGCGTATGGGGCTTTGTCACCCGCTC Aspergillus_ochraceoroseus CCCAGACCTCCCACCCGTGTCTACT-TGACCCT-GTTGCTTCGGCGGG---CTCGCC-----------CGCCGG-A-------------------AGC---CCCCAA----CAC-----GAACCC--TGT-CTGAGAGAGATGCTGTCTGAGTGTGATTGATACCA-A-TCAGTTAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAACTGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCTGCCCATCAAGCCCGGCTTGTGTGTTGGGTCGTCGTCCCTCCCGGTTCGCCCGGGGGGACGGGCCCGAAAGGCAGCGGCGGCACCGCGTCCGGTCCTCGAGCGTATGGGGCTTTGTCACCCGCTC Aspergillus_ochraceus -CCA-ACT-CCCACCG-TGTATACCGTA-CCTT-GTTGCTTCGGCGAG---CCCGCCCCCTTTTT--CTTTTAGGG--------------GGCACAGCGCTCGCCGGAGACACCAACGTGAACAC--TGT-CTGA-AGTTTTGTCGTCTGAGT-CGATT-GTATCGCAATCAGTTAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAACGCACCGAAATGCGATAATTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCACCCCCTGGTATTCCGGGGGGTATGCCTGTCCGAGCGTCATTGCC?CCC-TCAAGCACGGCTTGTGTGTTGGGTCGTCGTCCCCC---CC------AGGGGGACGGGCCCCAAAGGCA?CGGCGGCACC?CGTCCGGTCCTCGAGCGTATGGGGCTTTGTCACCCGCTC Aspergillus_parasiticus CCCA-ACCTCCCACCCGTGTTTACTGTA-CCTTAGTTGCTTCGGCGGG---CCCGCCG--T-CATGGCCGCCGGGG-GCG-TCAGCCCC-GGGCCCGCGCCCGCCGGAGACACCA---CGAACTC--TGT-CTGA-TCTAGTGAAGTCTGAGT-TGATT-GTATCGCAATCAGTTAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAACTAGTGTGAATTGCAGAATTCCGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCTGCCCATCAAGCACGGCTTGTGTGTTGGGTCGTCGTCCCCTCTCC------GGGGGGGACGGGCCCCAAAGGCAGCGGCGGCACCGCGTCCGATCCTCGAGCGTATGGGGCTTTGTCACCCGCTC Aspergillus_pseudotamarii_NRRL25517 CCCA-ACCTCCCACCCGTGTTTACTGTAACCTTAGTTGCTTCGGCGGG---CCCGCCG--TTTACGGCCGCCGGGG-GGCATCAGCCCCCGGGCCCGCGCCCGCCGGAGACACCA---CGAACTC--TGT-CTGA-TCTAGTGAAGTCTGAGT-TGATT-GTATCGCAATCAGTTAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAACTAGTGTGAATTGCAGAATTCCGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCTGCCCATCAAGCACGGCTTGTGTGTTGGGTCGTCGTCCCCTCTCC------GGGGGGGACGGGCCCCAAAGGCAGCGGCGGCACCGCGTCCGATCCTCGAGCGTATGGGGCTTTGTCACCCGCTC Aspergillus_pseudotamarii_NRRL443 CCCA-ACCTCCCACCCGTGTTTACTGTAACCTTAGTTGCTTCGGCGGG---CCCGCCG--TTTACGGCCGCCGGGG-GGCATCAGCCCCCGGGCCCGCGCCCGCCGGAGACACCA---CGAACTC--TGT-CTGA-TCTAGTGAAGTCTGAGT-TGATT-GTATCGCAATCAGTTAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAACTAGTGTGAATTGCAGAATTCCGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCTGCCCATCAAGCACGGCTTGTGTGTTGGGTCGTCGTCCCCTCTCC------GGGGGGGACGGGCCCCAAAGGCAGCGGCGGCACCGCGTCCGATCCTCGAGCGTATGGGGCTTTGTCACCCGCTC Aspergillus_tamarii_NRRL20818 CCCA-ACCTCCCACCCGTGTTTACTGTAACCTTAGTTGCTTCGGCGGG---CCCGCC---TTTAAGGCCGCCGGGG-GGCATCAGCCCCCGGGCCCGCGCCCGCCGGAGACACCA---CGAACTC--TGT-CTGA-TCTAGTGAAGTCTGAGT-TGATT-GTATCGCAATCAGTTAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAACTAGTGTGAATTGCAGAATTCCGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCTGCCCATCAAGCACGGCTTGTGTGTTGGGTCGTCGTCCCCTCTTC------GGGGGGGACGGGCCCCAAAGGCAGCGGCGGCACCGCGTCCGATCCTCGAGCGTATGGGGCTTTGTCACCCGCTC Aspergillus_tamarii_NRRL25565 CCCA-ACCTCCCACCCGTGTTTACTGTAACCTTAGTTGCTTCGGCGGG---CCCGCC---TTTAAGGCCGCCGGGG-GGCATCAGCCCCCGGGCCCGCGCCCGCCGGAGACACCA---CGAACTC--TGT-CTGA-TCTAGTGAAGTCTGAGT-TGATT-GTATCGCAATCAGTTAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAACTAGTGTGAATTGCAGAATTCCGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCTGCCCATCAAGCACGGCTTGTGTGTTGGGTCGTCGTCCCCTCTTC------GGGGGGGACGGGCCCCAAAGGCAGCGGCGGCACCGCGTCCGATCCTCGAGCGTATGGGGCTTTGTCACCCGCTC Aspergillus_versicolor CCCA-ACCTCCCACCCGTGACTACC-TAACACT-GTTGCTTCGGCGGGGAGCCCTCT-----------CGGGGGCG-------------------AGC---CGCCGGGGACTACT----GAACTTCATGC-CTGAGAGTGATGCAGTCTGAGTCTGA---ATATAA-AATCAGTCAAAACTTTCAACAATGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAACTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCCCTGGCATTCCGGGGGACATGCCTGTCCGAGCGTCATTGCTGCCCATCAAG?CCGGCTTGTGTGTTGGGTCGTCGTCCCCCCCGG----------GGGACGGGCCCGAAAGGCAGCGGCGGCACCGTGTCCGGTCCTCGAGCGTATGGGGCTTTGTCACCCGCTC ; END; BEGIN CODONS; CODONPOSSET * CodonPositions (CHARACTERS = 5.8S_ITS) = N: 1-460; CODONPOSSET CodonPositions (CHARACTERS = 5.8S_ITS) = N: 1-460; END; BEGIN TREES; TITLE Tb6474; LINK TAXA = Taxa1; TRANSLATE 1 Aspergillus_versicolor, 2 Aspergillus_pseudotamarii_NRRL443, 3 Aspergillus_pseudotamarii_NRRL25517, 4 Aspergillus_parasiticus, 5 Aspergillus_ochraceoroseus, 6 Aspergillus_nomius_NRRL29212, 7 Aspergillus_nomius_NRRL13137, 8 Aspergillus_nidulans, 9 Aspergillus_flavus, 10 Aspergillus_caelatus, 11 Aspergillus_bombycis_NRRL28900, 12 Aspergillus_bombycis_NRRL25593, 13 Aspergillus_alliaceus; TREE Fig._3 = [&R] (4,(9,((((12,11),((7,6),13)),((3,2),10)),(5,(8,1))))); END; BEGIN TREES; TITLE Tb6473; LINK TAXA = Taxa4; TRANSLATE 1 Aspergillus_versicolor, 2 Aspergillus_tamariiNRRL25565, 3 Aspergillus_tamariiNRRL20818, 4 Aspergillus_pseudotamarii_NRRL443, 5 Aspergillus_pseudotamarii_NRRL25517, 6 Aspergillus_parasiticus, 7 Aspergillus_ochraceus, 8 Aspergillus_ochraceoroseus, 9 Aspergillus_nomius_NRRL25393, 10 Aspergillus_nomius_NRRL13137, 11 Aspergillus_nidulans, 12 Aspergillus_fumigatis, 13 Aspergillus_flavus, 14 Aspergillus_bombycis, 15 Aspergillus_alliaceus; TREE Fig._2 = [&R] (11,(1,((((((3,2),(5,4)),(13,6)),(((9,10),15),14)),(7,12)),8))); END; BEGIN TREES; TITLE Tb6475; LINK TAXA = Taxa3; TRANSLATE 1 Aspergillus_versicolor, 2 Aspergillus_pseudotamarii_NRRL443, 3 Aspergillus_pseudotamarii_NRRL25517, 4 Aspergillus_parasiticus_ATCC56775, 5 Aspergillus_parasiticus_ATCC26691, 6 Aspergillus_ochraceoroseus, 7 Aspergillus_nomius_NRRL29212, 8 Aspergillus_nomius_NRRL13137, 9 Aspergillus_nidulans, 10 Aspergillus_flavus_NRRL1957, 11 Aspergillus_flavus_ATCC96044, 12 Aspergillus_bombycis, 13 Aspergillus_alliaceus; TREE Fig._4 = [&R] (7,((13,(12,(((5,4),(11,10)),((3,2),((1,9),6))))),8)); END; BEGIN TREES; TITLE Tb6472; LINK TAXA = Taxa2; TRANSLATE 1 Aspergillus_versicolor, 2 Aspergillus_tamarii_NRRL25565, 3 Aspergillus_tamarii_NRRL20818, 4 Aspergillus_pseudotamarii_NRRL443, 5 Aspergillus_pseudotamarii_NRRL25517, 6 Aspergillus_parasiticus, 7 Aspergillus_ochraceus, 8 Aspergillus_ochraceoroseus, 9 Aspergillus_nomius_NRRL25393, 10 Aspergillus_nomius_NRRL13137, 11 Aspergillus_nidulans, 12 Aspergillus_fumigatus, 13 Aspergillus_flavus, 14 Aspergillus_bombycis, 15 Aspergillus_alliaceus; TREE Fig._1_PAUP_5 = [&R] (3,(2,(((5,4),(13,6)),(14,((10,9),(15,(7,(12,((11,1),8))))))))); TREE Fig._1_PAUP_4 = [&R] (3,(2,(5,4,(13,6)),(14,((10,9),(15,(7,(12,((11,1),8)))))))); TREE Fig._1_PAUP_3 = [&R] (3,(2,((5,4),(13,6)),(14,((10,9),(15,(7,(12,((11,1),8)))))))); TREE Fig._1_PAUP_2 = [&R] (3,(2,((5,4),((13,6),(14,((10,9),(15,(7,(12,((11,1),8)))))))))); TREE Fig._1_PAUP_1 = [&R] (3,(2,(5,4),((13,6),(14,((10,9),(15,(7,(12,((11,1),8))))))))); END;