#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on April 24, 2024; 18:52 GMT TreeBASE (cc) 1994-2008 Study reference: Ortega A., Suárez-santiago V., & Vila J. 2009. Two new species of Cortinarius collected under Quercus rotundifolia in the Mediterranean area of southern Spain. Fungal Diversity, 36: 89-99. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S9973] BEGIN TAXA; TITLE Taxa1; DIMENSIONS NTAX=30; TAXLABELS Cortinarius_allutus_U56022 Cortinarius_cephalixus_AY174783 Cortinarius_cephalixus_AY174784 Cortinarius_cephalixus_AY174786 Cortinarius_coelopus_AY669640 Cortinarius_delaportei_AY669534 Cortinarius_inusitatus_GDA53699 Cortinarius_inusitatus_GDA53701 Cortinarius_inusitatus_GDA53702 Cortinarius_langei_AY669527 Cortinarius_langei_AY669558 Cortinarius_langei_DQ083789 Cortinarius_langei_DQ083790 Cortinarius_multiformis_AF389135 Cortinarius_mussivus_AY174814 Cortinarius_nanceiensis_AY174855 Cortinarius_nanceiensis_AY174856 Cortinarius_nanceiensis_var._bulbopodius_AY669520 Cortinarius_papulosus_AY669555 Cortinarius_percomis_AY669529 Cortinarius_serarius_AY669541 Cortinarius_sp._DQ083813 Cortinarius_viscidoamarus_GDA53703 Cortinarius_viscidoamarus_GDA53704 Cortinarius_viscidoamarus_GDA53705 Cortinarius_viscidoamarus_GDA53706 Cortinarius_viscidoamarus_GDA53707 Cortinarius_viscidoamarus_GDA53708 Cortinarius_viscidoamarus_GDA53709 Cortinarius_viscidoamarus_GDA53710 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M4185] TITLE ITS_matrix_Ortega_et_al._2008; LINK TAXA = Taxa1; DIMENSIONS NCHAR=650; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Cortinarius_allutus_U56022 TTGAAATAAAACTGATGAG-TTGTTGCTGGTTCTCTAGGGAGCA--TGTGCACGCTTGTCATATTTATA----TCTCCACTTGTGCACCTTTTGTAGACCTGGATATTTCTCTGAG---TGCTAGTCA-CTCAGGTTT--GAGGATTGACTT-TAT-GTCTCTCCTTACAT-TTTCAGGCCTATG-TTTCTTCATATACCCTAAT-GTATGTCA-TAGAATGTAA-TCAA-TAGGCCTTTGTGC-TATAAA-----C-CTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAATAATATA----TCAA-TCTCTTCAGCTTTT---GGTTGTTGAGTGTTGGATGTGGGGG-TCATTTTTTTTTGCTGGTCTTTTC---AAAGGTCAGCTCCCCTGAAATGCATTAGCGGAACAATTTGTGGACCGTTCATTGGTGTGAT--AACTATCTACGCTATTGACG-TGAAACA--GTTCAGC-TTCTAACAGTCT-ATTGAATTGGACAAATTTTCATTAA-TG Cortinarius_cephalixus_AY174783 TTGAAATAAATCTGATGAG-TTGCTGCTGGTTCTCTTGGGAGCA--TGTGCACGCTTGTCATCTTTATA----TCTCCACCTGTGCACCTTTTGTAGACCTGGATATCTCTCTGAG---TGCTAGTCA-CTCGGGTTT--GGGGATTGACTT-TAC-GTCTATTCTTACAT-TTCCAGGCCTATG-TTTCTTCATATACCCCAATTGTATGTTA-TAGAATGTAA-TCAA-T-GGCCT-TGTGCCTATAAA-----C-CTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAA---TATA----TCAA-CCTCTTCAGCTTTT---GCTTGTTGAGTGTTGGATGTGGGGGGTC----TTTTTTGCTGGTCTTT-----TAAGGTCAGCTCCCCTGAAATGTATTAGCGGAACAATT-GTGGACCGTTCATTGGTGTGAT--AACTATCTACGCTATTGACG-TCAAGCA--GTTCAGC-TTCTAACAGTCC-ATTGACTTGGACAAATTTTCATTAA-TG Cortinarius_cephalixus_AY174784 TTGAAATAAATCTGATGAG-TTGCTGCTGGTTCTCTTGGGAGCA--TGTGCACGCTTGTCATCTTTATA----TCTCCACCTGTGCACCTTTTGTAGACCTGGATATCTCTCTGAG---TGCTAGTCA-CTCGGGTTT--GGGGATTGACTT-TAC-GTCTATTCTTACAT-TTCCAGGCCTATG-TTTCTTCATATACCCCAATTGTATGTTA-TAGAATGTAA-TCAA-T-GGCCT-TGTGCCTATAAA-----C-CTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAA---TATA----TCAA-CCTCTTCAGCTTTT---GCTTGTTGAGTGTTGGATGTGGGGGGTC----TTTTTTGCTGGTCTTT-----TAAGGTCAGCTCCCCTGAAATGTATTAGCGGAACAATT-GTGGACCGTTCATTGGTGTGAT--AACTATCTACGCTATTGACG-TCAAGCA--GTTCAGC-TTCTAACAGTCC-ATTGACTTGGACAAATTTTCATTAA-TG Cortinarius_cephalixus_AY174786 TTGAAATAAATCTGATGAG-TTGCTGCTGGTTCTCTTGGGAGCA--TGTGCACGCTTGTCATCTTTATA----TCTCCACCTGTGCACCTTTTGTAGACCTGGATATCTCTCTGAG---TGCTAGTCA-CTCGGGTTT--GGGGATTGACTT-TAC-GTCTATTCTTACAT-TTCCAGGCCTATG-TTTCTTCATATACCCCAATTGTATGTTA-TAGAATGTAA-TCAA-T-GGCCT-TGTGCCTATAAA-----C-CTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAA---TATA----TCAA-CCTCTTAAGCTTTT---GCTTGTTGAGTGTTGGATGTGGGGGGTC----TTTTTTGCTGGTCTTT-----T{AG}AGGTCAGCTCCCCTGAAATGTATTAGCGGAACAATT-GTGGACCGTTCATTGGTGTGAT--AACTATCTACGCTATTGACG-TCAAGCA--GTTCAGC-TTCTAACAGTCC-ATTGACTTGGACAAATTTTCATTAA-TG Cortinarius_coelopus_AY669640 ??G-AATAA-TCTGATAAGTTTGTTGCTGGTTCTCTAGGGAGCA--TGTGCACACTTGTCATCTTTATATATATCTCCACCTGTGCACCTTTTGTAGACC----------TCTGAC--TTGCTAGCCAACTCAGGTTT--GAGGATTGACTT-CAT-GTCTTTCC-----------CGGTCTATG-CTTCTTCATATACCC-AATTGTATGTTATTAGAATGTAAATCAAAT-GGCCTTTGTGCCTATATA-----CACTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAA---TATATA--TCAACTCTCTTCAGCTTTT---GCTTGTTGAGTGTTGGATGTGGGGGGAGGAAGGTTTTTGCTGGTCCTCTC---TCAGGTCAGCTCCCCTGAAATGTATTAGCGGAACAATT-GTAAACCGTTCATTGGTGTGAT--AACTATCTACGCTATTGACGTTGAAGCACAGTTCAGC-TTCTAACAGTCCCATTGACTTGGACAAATTTTCATTAA-TG Cortinarius_delaportei_AY669534 TTGAAATAAATCTGATGAG-TTGCTGCTGGTTCTCTAGGGAGCA--TGTGCACGCTTGTCATCTTTATA----TTTCCACCTGTGCACCTTTTGTAGACCTGGATATCTCTCTGAA---TGCTAGCCA-CTCAGGTTT--AGGGATTGACTTTTCCCGTCTCTCCTTACAC-TTCCAGGCCTATGTTTTCT-AATATACTCCAAATCTACGTTA-TAGAATGTAT-TCAA-A-GGCCTTTGTGCCTATAAA-----C-TTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAA---TATA----TCAA-CCTCTTCAGCTTTT---GCTTGTTGAGTTTTGGATGTGGGGG-TT----TTTTTTGCTGGTCTTC-----TCAGATCAGCTCCCCTAAAATATATTAGCGGAACATTT-GTTGACCGTTCATTGGTGTGAT--AAATATCTACGCTTTTGACG-TGAAGCA--GTTCAGC-TTCCAACAGTCC-ATTCGCTTGGACAAGTTTTCATTAA-TG Cortinarius_inusitatus_GDA53699 TTGAAATAAATCTGATGAG-TTGTTGCTGGTTCTCTAGGGAGCA--TGTGCACACTTGTCGTCTTTATA----TCTCCACCTGTGCACCTTTTGTAGACCTGGATATCTCTCTGAGTGCTGC--------TCAGGTTT--GAGGATTGACTT-TAT-GTCTCTCCTTGCAT-TTTCAGGCCTATG-TTT-TTCATATACCCCAAT-GTATGTCA-TAGAATGTTA-TCAA-TGGGCCTTTGTGCCTATAAA-----T-CTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAA---TATA----TCAA-ACTCTTCAGCTTTTT--AGTTGTTGAGTGTTGGATGTGGGGG-TG--TTTTTTTTGCTGGCCTTCT----GAAGGTCAGCTCCCCTGAAATGCATTAGCTGAACAATTTGTTGACCGTTCATTGGTGTGAT--AACTATCTACGCTATTGACG-TGAAGCA--GTTCAGC-TTCTAACAGTCT-ATTGAATTGGACAAATTTTCATTAA-TG Cortinarius_inusitatus_GDA53701 TTGAAATAAATCTGATGAG-TTGTTGCTGGTTCTCTAGGGAGCA--TGTGCACACTTGTCGTCTTTATA----TCTCCACCTGTGCACCTTTTGTAGACCTGGATATCTCTCTGAGTGCTGC--------TCAGGTTT--GAGGATTGACTT-TAT-GTCTCTCCTTGCAT-TTTCAGGCCTATG-TTT-TTCATATACCCCAAT-GTATGTCA-TAGAATGTTA-TCAA-TGGGCCTTTGTGCCTATAAA-----T-CTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAA---TATA----TCAA-ACTCTTCAGCTTTTT--AGTTGTTGAGTGTTGGATGTGGGGG-TG--TTTTTTTTGCTGGCCTTCT----GAAGGTCAGCTCCCCTGAAATGCATTAGCTGAACAATTTGTTGACCGTTCATTGGTGTGAT--AACTATCTACGCTATTGACG-TGAAGCA--GTTCAGC-TTCTAACAGTCT-ATTGAATTGGACAAATTTTCATTAA-TG Cortinarius_inusitatus_GDA53702 TTGAAATAAATCTGATGAG-TTGTTGCTGGTTCTCTAGGGAGCA--TGTGCACACTTGTCGTCTTTATA----TCTCCACCTGTGCACCTTTTGTAGACCTGGATATCTCTCTGAGTGCTGC--------TCAGGTTT--GAGGATTGACTT-TAT-GTCTCTCCTTGCAT-TTTCAGGCCTATG-TTT-TTCATATACCCCAAT-GTATGTCA-TAGAATGTTA-TCAA-TGGGCCTTTGTGCCTATAAA-----T-CTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAA---TATA----TCAA-ACTCTTCAGCTTTTT--AGTTGTTGAGTGTTGGATGTGGGGG-TG--TTTTTTTTGCTGGCCTTCT----GAAGGTCAGCTCCCCTGAAATGCATTAGCTGAACAATTTGTTGACCGTTCATTGGTGTGAT--AACTATCTACGCTATTGACG-TGAAGCA--GTTCAGC-TTCTAACAGTCT-ATTGAATTGGACAAATTTTCATTAA-TG Cortinarius_langei_AY669527 ?????????????????AG-TTGCTGCTGGCCCTCTTGAGAGCA--TGTGCACGCTTGTCATCTTTATA----TCTCCACCTGTGCACCTTTTGTAGACCTAGATAACTCTCTGAA---TGCTAGTCA-CTCAGGTTC--GAGGATTGACTT-CGA-GTCTCTCCTTACAT-TTCTAGGCCTATG-TTTCTTCATATACCCGAATTCTTTGTTA-TAGAATGTAA-TCAA-T-GGCCTCTGTGCCTATAAA-----C-TTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAA---TATA----TCAA-CCTCTTCAGTTTTT---GCTTGTTGAGTGTTGGATGTGGGGGTTC----TTTTTTGCTGGTCTTC-----CCAGGTCAGCTCCCCTGAAATGCATTAGCGGAACAATT-GTAGACCGTTCATTGGTGTGAT--AACTATCTATGCTATTGACG-TGAAACA--GTTCAGCTTTCTAACCATCC-ATTGACTTGGATAAATATTCATTAA-TG Cortinarius_langei_AY669558 TTGAAATAAACCTGATGAG-TTGTTGCTGGTTCTCTAGGGAGCA--TGTGCACACTTGTCATCTTTATA----TCTCCACCTGTGCAC{CT}TTTTGTAGACCTGGATATCTCTCTGAGTGCTGCTAGTCA-CTCAGGTTT--G{AG}GGCTTGACTT-TAT-GTCTCTCCTTACAT-TTTCAGGCCTATG-TTTCTCCATATACCCTAAT-GTATGTCA-TAGAATGTTA-TCAA-TGGGCCTTTGTGCCTATAAA-----T-CTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAA---TATA----TCAA-CCTCTTCAGCTTTT---GGTTGTTGAGTGTTGGATGTGGGGGGTC---TTTTTTTGCTGGTCTTTTTTTAAAAGGTCAGCTCCCCTGAAATGCATTAGCAGAACAATTTGTGGACCGTTCATTGGTGTGAT--AACTATCTACGCTATTGACG-TGAAGCA--GTTCAGC-TTCTAACAGTCC-ATTGAATTGGACAATTTTTCATTAA-TG Cortinarius_langei_DQ083789 TTGAAATAAACCTGATGAG-TTGTTGCTGGTTCTCTAGGGAGCA--TGTGCACACTTGTCATCTTTATA----TCTCCACCTGTGCAC{CT}TTTTGTAGACCTGGATATCTCTCTGAGTGCTGCTAGTCA-CTCAGGTTT--GAGGCTTGACTT-TAT-GTCTCTCCTTACAT-TTTCAGGCCTATG-TTTCTCCATATACCCTAAT-GTATGTCA-TAGAATGTTA-TCAA-TGGGCCTTTGTGCCTATAAA-----T-CTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAA---TATA----TCAA-CCTCTTCAGCTTTT---GGTTGTTGAGTGTTGGATGTGGGGGGTC---TTTTTTTGCTGGTCTTTTTTTAAAAGGTCAGCTCCCCTGAAATGCATTAGCAGAACAATTTGTGGACCGTTCATTGGTGTGAT--AACTATCTACGCTATTGACG-TGAAGCA--GTTCAGC-TTCTAACAGTCC-ATTGAATTGGACAATTTTTCATTAA-TG Cortinarius_langei_DQ083790 TTGAAATAAACTTGATGAG-TTGTTGCTGGTTCTCTAGGGAGCA--TGTGCACACTTGTCATCTTTATA----TCTCCACCTGTGCACCTTTTGTAGACCTGGATATCTCTCTGAGTGCTGCTAGTCA-CTCAGGTTT--GAGGCTTGACTT-TAT-GTCTCTCCTTACAT-TTTCAGGCCTATG-TTTCTCCATATACCCTAAT-GTATGTCA-TAGAATGTTA-TCAA-TGGGCCTTTGTGCCTATAAA-----T-CTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAA---TATA----TCAA-CCTCTTCAGCTTTT---GGTTGTTGAGTGTTGGATGTGGGGG-TC---TTTTTTTGCTGGTCTTTTTTTAAAAGGTCAGCTCCCCTGAAATGCATTAGCAGAACAATTTGTGGACCGTTCATTGGTGTGAT--AACTATCTACGCTATTGACG-TGAAGCA--GTTCAGC-TTCTAACAGTCC-ATTGAATTGGACAATTTTTCATTAA-TG Cortinarius_multiformis_AF389135 TTGAAATAAATCTGATGAG-TTGTTGCTGGTTCTCTAGGGAGCA--TGTGCACACTTGTCATCTTTATA----TCTCCACCTGTGCACCTTTTGTAGACCTGGATATCTCTCTGAGTGATGCTAGTCA-TTCAGGTTT--GAGGATTGACTT-TAT-GTCTCTCCTTACAT-TTTCAGGCCTATG-TTTCTTCATATACCCTAAT-GTATGTCA-TAGAATGTTA-TCAA-TGGGCCTTTGTGCCTATAAA-----T-CTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAA---TATA----TCAA-ACTCTCCAGCTTTT---GGTTGTTGAGTGTTGGATTTGGGGG-TG---TTTTTTTGCTGGCCTTTCC---AAAGGTCAGCTCCCCTGAAATATATTAGCTGAACAATATGTTGACCGTTCATTGGTGTGAT--AACTATCTACGCTTTTGACG-TGAAGCA--GTTCAGC-TTCTAACAGTCT-ATTGAGTTGGACAA-TTTTCATTAA-TG Cortinarius_mussivus_AY174814 TTG-AATAAATCTGATGAG-TTGTTGCTGGTTCTCTAGGGAGCA--TGTGCACGCCTGTCATCTTTATA----TCTCCACCTGTGCATCTTTTGTAGACCTGAATACATTTCTGAA---TGCGAG----TTCAGGTTTTTGGGGATTGACTT-TAT-GTTTTTCCTTACACATTTCAGGTCTATG-TTACTTCATTTACCC-AATTGTATGTTA-TGGAATGTCG-CTAAGT-GGCCCTTGTGCCCATAAA-----C-CTTTACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATTTTTGAACGCATCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAA---TATGTATATCAA-CCTTT--ATT-----------------TGTTGGATGTGGGGG-TC---TTCTTTTGCTGGTCCTTC----TAAGGTCAGCTCCCCTGAAATGTATTAGCTGAACAATT-GTAAACCGTTCATTGGTGTGAT--AACTATCTATGCTATTGACG-GGAAGCA-GTTTCAGC-TTCTAAATGTCC-ATTGATTTGGACAAGTTGTTATTAA-TG Cortinarius_nanceiensis_AY174855 ATG-AATAAATCTGATGAG-TTGTTGCTGGTTCTCTAGAGGGCA--TGTGCACGCTTGTCATCTTTATA----TCTCCACATGTGCACTTTTTGTAGACCTGGATAACCCTCTGAA---TGCCAGTCA-CTCAGGTTT--GGGGATCGGCGT-TAT-GTCTCTCCTTACAT-TTCCAGGCCTATG-TTTATTCATATACCC-AATTCTATG-ATTTAGAAT------------GGCCTTTTGGCTTATAAATAAAAG-CTTTACAACTTTCAGCAATGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATTTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGAAGCATGCCTGTTTGAGTGTCATTAA---TATATC--TCAA-CCTCTTCATTTTTT-----TTGTTGAGTGTTGGATGTGGGGGGTT----TATTTTGCTGGTTTTTC----TAAGGTCAGCTCCCCTGAAATGTATTAGCGGAACAATT-GTAGACCGTTCATTGGTGTGATACAACTATCTACGCTATTGACG-CGAAGCA--GTTCAGC-TTCTAACAGTCT-ATTAATTTGGACAAGTTTTCATTAA-TG Cortinarius_nanceiensis_AY174856 ATG-AATAAATCTGATGAG-TTGTTGCTGGTTCTCTAGAGGGCA--TGTGCACGCTTGTCATCTTTATA----TCTCCACATGTGCACTTTTTGTAGACCTGGATAACCCTCTGAA---TGCCAGTCA-CTCAGGTTT--GGGGATCGGCGT-TAT-GTCTCTCCTTACAT-TTCCAGGCCTATG-TTTATTCATATACCC-AATTCTATG-ATTTAGAAT------------GGCCTTTTGGCTTATAAATAAAAG-CTTTACAACTTTCAGCAATGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATTTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGAAGCATGCCTGTTTGAGTGTCATTAA---TATATC--TCAA-CCTCTTCATTTTTT-----TTGTTGAGTGTTGGATGTGGGGGGTT----TATTTTGCTGGTTTTTC----TAAGGTCAGCTCCCCTGAAATGTATTAGCGGAACAATT-GTAGACCGTTCATTGGTGTGATACAACTATCTACGCTATTGACG-CGAAGCA--GTTCAGC-TTCTAACAGTCT-ATTAATTTGGACAAGTTTTCATTAA-TG Cortinarius_nanceiensis_var._bulbopodius_AY669520 ATG-AATAAATCTGATCAG-TTGTCGCTGGTTCTTTAAAGGGCA--TGTGCACGCTTGTCATCTTTATA----TCTCCACCTGTGCACTTTTTGTAGACCGGGATATCCCTCTGAG---TGCCAGTCA-CTCAGGTTT--GGGGATTGGCTT-TAC-GTCTCTCCTTACAT-TTCCGGGTCTATG-TTTATTCATATACAC-AA-----------TACATTGTAA-TAAAGT--------CGGCTTATAAATGAAAC-CTTTACAACTTTCAGCAATGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGAAGCATGCCTGTTTGAGTGTCATTAA---TATATA--TCAA-CCTCTTCAGTTA-------TTGTTGAGTGTTGGATGTGGGGG-TT----TATTTTGCTGGTTTTC-----TACAGTCAGCTCCCCTGAAATGTATTAGCGGAACAATT-GTAGACCGTTCATTGGTGTGATACAACTATCTACGCTATTGACG-TGAAGCA--GTTCAGC-TTCTAACAGTCT-ATTAATTTGGACAAGTTTTCATTAA-TG Cortinarius_papulosus_AY669555 TTGAAATAAATCTGATAAG-TTGTTGCTGGTTCTCTAGGGAACA--TGTGCACACTTGTCATCTTTATA----TCTCCACCTGTGCACCTTTTGTAGACCTGGATATCTCTCTGAC---TGCTAGACA-CTCAGGTTT--GGGGATTGACTT--AT-GTCTTTCCTTATAT-TTCTCGGTCTATG-CTTCTTCATATACCC-AATTGTATGTTA-TAGAATGTAA-CCAAAT-GGCCTTTGTGCCTATAAA-----T-CTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAA---TATA----TCAATTCTTTTCAGCTTTT---GCTTGTTGAGTGTTGGATGTGGGGGGTC---ATTTTTTGCTGGTCCTT-----TCAGATCAGCTCCCCTGAAATGTATTAGCGGAACAATT-GTAAACCGTTCATTGGTGTGAT--AACTATCTACGCTATTGACG-TGAAGCACAGTTCAGC-TTCTAACAGTCC-ATTGACTTGGACAAATTTTCATTAA-TG Cortinarius_percomis_AY669529 TTG-AATAAATCTGATAAG-TTGTTGCTGGTTCTCTAGGGAGCA--TGTGCACGCTTGTCGTCTTTATATTT-TCTCCACCTGTGCATCTTTTGTAGACCTGGATACCTTTCTGAT---TGCTAGTCA-CTCGGGTAT--GGGGATTGACTT-GACGGTCTCTCCTTACAT-TTCCAGGCCTATG-TTTCTACACATACCC-ACTTCTACGTTA-TAGAATGTAA-TCAA-T-GGCCTTTGTGCCTATAAA----ACATTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAA---TATA----TCAA-CCTTTTCAAATTTT---GTTTGTTGAGTGTTGGATATGGGGG-TC----TCTTTTGCTGGTCTTTC----TAAGGTCAGCTCCCCTGAAATGTATTAGCGGAACAATT-GTGGACCGTTTATTGGTGTGAT--AACTATCTACGCTATTAACG-TGAAGCA-GGTTCAGC-TTCTAACAGTCC-ATTCATTTGGACAAATTCTTATTAAATG Cortinarius_serarius_AY669541 TTGAAATAAATCTGATGAG-TTGCTGCTGGTTCTCTAGGGAGCA--TGTGCACGCTTGTCATCTTTATA----TCTCCACCTGTGCACCTTTTGTAGTCCTGGATAACTTTCTGAA---TGCTAGCCA-CTCAGGTTT--GGGGATTGACGTTTTCCGTCTCTCCTTACAT-TTCCAGGTCTATG-TTTATTCATATACTCCAATTGTATGTTA-TAGAATGTCA-TCA-GT-GGCCTTTGTGCCTATAAA-----C-CTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAA---TATA----TCAA-CCGCCTAAGCTTTT---GCTTGTGGAGCGTTGGATGTGGGGG-TC------TTTTGCCGGCCTAC-----TCAGGTCGGCTCCCCTGAAATTTATTAGTGGAACAATT-GTTGACCGTCCATTGGTGTGAT--AACTATCTACGCTATTGACGGTGAAGCA-GGTTCAGC-TTCTAACAGTCC-ATTCACTTGGACAATCATTCATTAA-TG Cortinarius_sp._DQ083813 TTGAAATAAATCTGATGAG-TTGCTGCTGGCCCTCTTGAGAGCA--TGTGCACGCTTGTCATCTTTATA----TCTCCACCTGTGCACCTTTTGTAGACCTAGATAACTCTCTGAA---TGCTAGTCA-CTCAGGTTC--GAGGATTGACTT-CGA-GTCTCTCCTTACAT-TTCTAGGCCTATG-TTTCTTCATATACCCGAATTCTTTGTTA-TAGAATGTAA-TCAA-T-GGCCTCTGTGCCTATAAA-----C-TTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAA---TATA----TCAA-CCTCTTCAGTTTTT---GCTTGTTGAGTGTTGGATGTGGGGGTTC----TTTTTTGCTGGTCTTC-----CCAGGTCAGCTCCCCTGAAATGCATTAGCGGAACAATT-GTAGACCGTTCATTGGTGTGAT--AACTATCTATGCTATTGACG-TGAAACA--GTTCAGCTTTCTAACCATCC-ATTGACTTGGATAAATATTCATTAA-TG Cortinarius_viscidoamarus_GDA53703 TTGAAATAAACCTGATGAG-TTGCTGCTGGCTCTCTTGAGAGCATATGTGCACGCTTGTCGTCTTTATA----CCTCCACCTGTGCACCTTTTGTAGGCCTGGATAAATTTCTGAA---TGCTAGTCAGTTCAGGTTT--GAGGATTGACTT-CAA-GTCTCTCCTTACAT-TTCCAGGTCTATG-TTTCTTCATATACCCCAATTGTATGTTA-TAGAATGTAA-TCAT-T-GGCCTCTGTGCCTATAAA-----C-CTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAA---TATATA--TCAA-CCTCATCAGTTTTTTTTGCTTGTTGAGTGTTGGATGTGGGGG-TC---TTTTTTTGTTGGTCTTC-----CAAGGTCAGCTCCCCTGAAATGCATTAGCGGAACAATT-GCGGACCGTCCATTGGTGTGAT--AACTATCTACGCTATTGACG-TGAAGCA--GTTCAGC-TTCTAACAATCC-ATTGACTTGGATAAATTTTTATTAA-TG Cortinarius_viscidoamarus_GDA53704 TTGAAATAAACCTGATGAG-TTGCTGCTGGCTCTCTTGAGAGCATATGTGCACGCTTGTCGTCTTTATA----CCTCCACCTGTGCACCTTTTGTAGGCCTGGATAAATTTCTGAA---TGCTAGTCAGTTCAGGTTT--GAGGATTGACTT-CAA-GTCTCTCCTTACAT-TTCCAGGTCTATG-TTTCTTCATATACCCCAATTGTATGTTA-TAGAATGTAA-TCAT-T-GGCCTCTGTGCCTATAAA-----C-CTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAA---TATATA--TCAA-CCTCATCAGTTTTTTTTGCTTGTTGAGTGTTGGATGTGGGGG-TC---TTTTTTTGTTGGTCTTC-----CAAGGTCAGCTCCCCTGAAATGCATTAGCGGAACAATT-GCGGACCGTCCATTGGTGTGAT--AACTATCTACGCTATTGACG-TGAAGCA--GTTCAGC-TTCTAACAATCC-ATTGACTTGGATAAATTTTTATTAA-TG Cortinarius_viscidoamarus_GDA53705 TTGAAATAAACCTGATGAG-TTGCTGCTGGCTCTCTTGAGAGCATATGTGCACGCTTGTCGTCTTTATA----CCTCCACCTGTGCACCTTTTGTAGGCCTGGATAAATTTCTGAA---TGCTAGTCAGTTCAGGTTT--GAGGATTGACTT-CAA-GTCTCTCCTTACAT-TTCCAGGTCTATG-TTTCTTCATATACCCCAATTGTATGTTA-TAGAATGTAA-TCAT-T-GGCCTCTGTGCCTATAAA-----C-CTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAA---TATATA--TCAA-CCTCATCAGTTTTTTTTGCTTGTTGAGTGTTGGATGTGGGGG-TC---TTTTTTTGTTGGTCTTC-----CAAGGTCAGCTCCCCTGAAATGCATTAGCGGAACAATT-GCGGACCGTCCATTGGTGTGAT--AACTATCTACGCTATTGACG-TGAAGCA--GTTCAGC-TTCTAACAATCC-ATTGACTTGGATAAATTTTTATTAA-TG Cortinarius_viscidoamarus_GDA53706 TTGAAATAAACCTGATGAG-TTGCTGCTGGCTCTCTTGAGAGCATATGTGCACGCTTGTCGTCTTTATA----CCTCCACCTGTGCACCTTTTGTAGGCCTGGATAAATTTCTGAA---TGCTAGTCAGTTCAGGTTT--GAGGATTGACTT-CAA-GTCTCTCCTTACAT-TTCCAGGTCTATG-TTTCTTCATATACCCCAATTGTATGTTA-TAGAATGTAA-TCAT-T-GGCCTCTGTGCCTATAAA-----C-CTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAA---TATATA--TCAA-CCTCATCAGTTTTTTTTGCTTGTTGAGTGTTGGATGTGGGGG-TC---TTTTTTTGTTGGTCTTC-----CAAGGTCAGCTCCCCTGAAATGCATTAGCGGAACAATT-GCGGACCGTCCATTGGTGTGAT--AACTATCTACGCTATTGACG-TGAAGCA--GTTCAGC-TTCTAACAATCC-ATTGACTTGGATAAATTTTTATTAA-TG Cortinarius_viscidoamarus_GDA53707 TTGAAATAAACCTGATGAG-TTGCTGCTGGCTCTCTTGAGAGCATATGTGCACGCTTGTCGTCTTTATA----CCTCCACCTGTGCACCTTTTGTAGGCCTGGATAAATTTCTGAA---TGCTAGTCAGTTCAGGTTT--GAGGATTGACTT-CAA-GTCTCTCCTTACAT-TTCCAGGTCTATG-TTTCTTCATATACCCCAATTGTATGTTA-TAGAATGTAA-TCAT-T-GGCCTCTGTGCCTATAAA-----C-CTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAA---TATATA--TCAA-CCTCATCAGTTTTTTTTGCTTGTTGAGTGTTGGATGTGGGGG-TC---TTTTTTTGTTGGTCTTC-----CAAGGTCAGCTCCCCTGAAATGCATTAGCGGAACAATT-GCGGACCGTCCATTGGTGTGAT--AACTATCTACGCTATTGACG-TGAAGCA--GTTCAGC-TTCTAACAATCC-ATTGACTTGGATAAATTTTTATTAA-TG Cortinarius_viscidoamarus_GDA53708 TTGAAATAAACCTGATGAG-TTGCTGCTGGCTCTCTTGAGAGCATATGTGCACGCTTGTCGTCTTTATA----CCTCCACCTGTGCACCTTTTGTAGGCCTGGATAAATTTCTGAA---TGCTAGTCAGTTCAGGTTT--GAGGATTGACTT-CAA-GTCTCTCCTTACAT-TTCCAGGTCTATG-TTTCTTCATATACCCCAATTGTATGTTA-TAGAATGTAA-TCAT-T-GGCCTCTGTGCCTATAAA-----C-CTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAA---TATATA--TCAA-CCTCATCAGTTTTTTTTGCTTGTTGAGTGTTGGATGTGGGGG-TC---TTTTTTTGTTGGTCTTC-----CAAGGTCAGCTCCCCTGAAATGCATTAGCGGAACAATT-GCGGACCGTCCATTGGTGTGAT--AACTATCTACGCTATTGACG-TGAAGCA--GTTCAGC-TTCTAACAATCC-ATTGACTTGGATAAATTTTTATTAA-TG Cortinarius_viscidoamarus_GDA53709 TTGAAATAAACCTGATGAG-TTGCTGCTGGCTCTCTTGAGAGCATATGTGCACGCTTGTCGTCTTTATA----CCTCCACCTGTGCACCTTTTGTAGGCCTGGATAAATTTCTGAA---TGCTAGTCAGTTCAGGTTT--GAGGATTGACTT-CAA-GTCTCTCCTTACAT-TTCCAGGTCTATG-TTTCTTCATATACCCCAATTGTATGTTA-TAGAATGTAA-TCAT-T-GGCCTCTGTGCCTATAAA-----C-CTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAA---TATATA--TCAA-CCTCATCAGTTTTTTTTGCTTGTTGAGTGTTGGATGTGGGGG-TC---TTTTTTTGTTGGTCTTC-----CAAGGTCAGCTCCCCTGAAATGCATTAGCGGAACAATT-GCGGACCGTCCATTGGTGTGAT--AACTATCTACGCTATTGACG-TGAAGCA--GTTCAGC-TTCTAACAATCC-ATTGACTTGGATAAATTTTTATTAA-TG Cortinarius_viscidoamarus_GDA53710 TTGAAATAAACCTGATGAG-TTGCTGCTGGCTCTCTTGAGAGCATATGTGCACGCTTGTCGTCTTTATA----CCTCCACCTGTGCACCTTTTGTAGGCCTGGATAAATTTCTGAA---TGCTAGTCAGTTCAGGTTT--GAGGATTGACTT-CAA-GTCTCTCCTTACAT-TTCCAGGTCTATG-TTTCTTCATATACCCCAATTGTATGTTA-TAGAATGTAA-TCAT-T-GGCCTCTGTGCCTATAAA-----C-CTATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAA---TATATA--TCAA-CCTCATCAGTTTTTTTTGCTTGTTGAGTGTTGGATGTGGGGG-TC---TTTTTTTGTTGGTCTTC-----CAAGGTCAGCTCCCCTGAAATGCATTAGCGGAACAATT-GCGGACCGTCCATTGGTGTGAT--AACTATCTACGCTATTGACG-TGAAGCA--GTTCAGC-TTCTAACAATCC-ATTGACTTGGATAAATTTTTATTAA-TG ; END; BEGIN CODONS; CODONPOSSET CodonPositions (CHARACTERS = ITS_matrix_Ortega_et_al._2008) = N: 1-650; CODONPOSSET * CodonPositions (CHARACTERS = ITS_matrix_Ortega_et_al._2008) = N: 1-650; END; BEGIN TREES; TITLE Tb10369; LINK TAXA = Taxa1; TRANSLATE 1 Cortinarius_inusitatus_GDA53699, 2 Cortinarius_inusitatus_GDA53701, 3 Cortinarius_inusitatus_GDA53702, 4 Cortinarius_multiformis_AF389135, 5 Cortinarius_langei_DQ083789, 6 Cortinarius_langei_AY669558, 7 Cortinarius_langei_DQ083790, 8 Cortinarius_allutus_U56022, 9 Cortinarius_viscidoamarus_GDA53703, 10 Cortinarius_viscidoamarus_GDA53704, 11 Cortinarius_viscidoamarus_GDA53705, 12 Cortinarius_viscidoamarus_GDA53706, 13 Cortinarius_viscidoamarus_GDA53707, 14 Cortinarius_viscidoamarus_GDA53708, 15 Cortinarius_viscidoamarus_GDA53709, 16 Cortinarius_viscidoamarus_GDA53710, 17 Cortinarius_sp._DQ083813, 18 Cortinarius_langei_AY669527, 19 Cortinarius_cephalixus_AY174784, 20 Cortinarius_cephalixus_AY174786, 21 Cortinarius_cephalixus_AY174783, 22 Cortinarius_delaportei_AY669534, 23 Cortinarius_percomis_AY669529, 24 Cortinarius_papulosus_AY669555, 25 Cortinarius_mussivus_AY174814, 26 Cortinarius_nanceiensis_AY174855, 27 Cortinarius_nanceiensis_AY174856, 28 Cortinarius_nanceiensis_var._bulbopodius_AY669520, 29 Cortinarius_serarius_AY669541, 30 Cortinarius_coelopus_AY669640; TREE Fig._1 = [&R] ((25,(28,(26,27))),(23,(((((11,16,10,12,13,15,9,14),(17,18)),(22,29)),(20,(19,21))),((24,30),(8,(((5,7),6),(4,(2,1,3)))))))); END;