#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 15, 2024; 14:41 GMT TreeBASE (cc) 1994-2008 Study reference: Chen Y., Ji Y., Yu H., & Wang Z. 2009. A new Neotyphodium species from Festuca parvigluma Steud. grown in China. Mycologia, 101(5): 681-685. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S9982] BEGIN TAXA; TITLE Taxa1; DIMENSIONS NTAX=64; TAXLABELS Epichloe_amarillans_AF457504 Epichloe_amarillans_AF457505 Epichloe_baconii_AF231193 Epichloe_baconii_AF231195 Epichloe_baconii_AF231196 Epichloe_brachyelytri_AF231197 Epichloe_brachyelytri_AF231201 Epichloe_bromicola_AY033356 Epichloe_bromicola_AY033357 Epichloe_clarkii_AF231206 Epichloe_clarkii_AF231207 Epichloe_elymi_AF457498 Epichloe_elymi_AF457502 Epichloe_festucae_AF231210 Epichloe_festucae_AF231212 Epichloe_glyceriae_AF231216 Epichloe_glyceriae_AF231217 Epichloe_sylvatica_AF231218 Epichloe_sylvatica_AF231219 Epichloe_typhina_AF231222 Epichloe_typhina_AF231223 Epichloe_typhina_AF231225 Epichloe_typhina_AF231228 Epichloe_typhina_AF231229 Epichloe_typhina_AF231231 Epichloe_yangzii_DQ134031 Epichloe_yangzii_DQ134032 Neotyphodium_Fnj4602_copy1_FJ211201 Neotyphodium_Fnj4602_copy2_FJ211202 Neotyphodium_Fnj4603_copy1_FJ211203 Neotyphodium_Fnj4603_copy2_FJ211204 Neotyphodium_Fnj4604_copy1_FJ211205 Neotyphodium_Fnj4604_copy2_FJ211206 Neotyphodium_Fnj6605_copy1_FJ211207 Neotyphodium_Fnj6605_copy2_FJ211208 Neotyphodium_Fnj6606_copy1_FJ211209 Neotyphodium_Fnj6606_copy2_FJ211210 Neotyphodium_Rnj6105_copy1_EU409300 Neotyphodium_Rnj6105_copy2_FJ189477 Neotyphodium_Rxy6106_copy1_EU409302 Neotyphodium_Rxy6106_copy2_FJ189478 Neotyphodium_aotearoae_AF323391 Neotyphodium_australiense_AF323400 Neotyphodium_australiense_AF323402 Neotyphodium_chisosum_AF457508 Neotyphodium_chisosum_AF457509 Neotyphodium_chisosum_AF457510 Neotyphodium_coenophialum_AF457511 Neotyphodium_coenophialum_AF457512 Neotyphodium_gansuense_inebrians_AF457538 Neotyphodium_gansuense_inebrians_AF457539 Neotyphodium_huerfanum_AF457537 Neotyphodium_lolii_AF457540 Neotyphodium_melicicola_AF323406 Neotyphodium_occultans_AF457541 Neotyphodium_occultans_AF457542 Neotyphodium_siegelii_AF308132 Neotyphodium_siegelii_AF308133 Neotyphodium_tembladerae_AF323407 Neotyphodium_tembladerae_AF323408 Neotyphodium_tembladerae_AF457544 Neotyphodium_tembladerae_AF457545 Neotyphodium_typhinum_canariense_AF457543 Neotyphodium_uncinatum_AF308131 ; END; BEGIN TAXA; TITLE Taxa2; DIMENSIONS NTAX=72; TAXLABELS Epichloe_amarillans_AF062426 Epichloe_amarillans_AF457466 Epichloe_baconii_AF250733 Epichloe_baconii_L06961 Epichloe_baconii_L78270 Epichloe_brachyelytri_AF250736 Epichloe_brachyelytri_L78271 Epichloe_bromicola_AY033382 Epichloe_bromicola_AY033383 Epichloe_clarkii_AF250738 Epichloe_clarkii_L78281 Epichloe_elymi_AF062428 Epichloe_elymi_AF457468 Epichloe_festucae_L06955 Epichloe_festucae_L78286 Epichloe_glyceriae_L78275 Epichloe_glyceriae_L78276 Epichloe_sylvatica_L78278 Epichloe_sylvatica_L78291 Epichloe_typhina_AF062429 Epichloe_typhina_L78274 Epichloe_typhina_L78284 Epichloe_typhina_L78285 Epichloe_typhina_L78288 Epichloe_typhina_L78292 Epichloe_yangzii_DQ134037 Epichloe_yangzii_DQ134038 Neotyphodium_Fnj4602_copy1_FJ211211 Neotyphodium_Fnj4602_copy2_FJ211212 Neotyphodium_Fnj4603_copy1_FJ211213 Neotyphodium_Fnj4603_copy2_FJ211214 Neotyphodium_Fnj4604_copy1_FJ211215 Neotyphodium_Fnj4604_copy2_FJ211216 Neotyphodium_Fnj6605_copy1_FJ211217 Neotyphodium_Fnj6605_copy2_FJ211218 Neotyphodium_Fnj6606_copy1_FJ211219 Neotyphodium_Fnj6606_copy2_FJ211220 Neotyphodium_Rnj6105_copy1_EU409310 Neotyphodium_Rxy6106_copy1_EU409305 Neotyphodium_Rxy6106_copy2_EU409308 Neotyphodium_aotearoae_AF323370 Neotyphodium_australiense_AF323379 Neotyphodium_australiense_AF323381 Neotyphodium_chisosum_AF457470 Neotyphodium_chisosum_AF457471 Neotyphodium_chisosum_AF457472 Neotyphodium_coenophialum_L06951 Neotyphodium_coenophialum_L06964 Neotyphodium_coenophialum_X56847 Neotyphodium_gansuense_EF422756 Neotyphodium_gansuense_EF422757 Neotyphodium_gansuense_inebrians_AF457494 Neotyphodium_gansuense_inebrians_AF457495 Neotyphodium_guerinii_EF422746 Neotyphodium_guerinii_EF422747 Neotyphodium_guerinii_EF422754 Neotyphodium_guerinii_EF422755 Neotyphodium_huerfanum_AF457493 Neotyphodium_lolii_AY865628 Neotyphodium_lolii_AY865629 Neotyphodium_melicicola_AF323384 Neotyphodium_melicicola_AF323386 Neotyphodium_occultans_AF176271 Neotyphodium_occultans_AF176275 Neotyphodium_siegelii_AF308138 Neotyphodium_siegelii_AF308139 Neotyphodium_tembladerae_AF323389 Neotyphodium_tembladerae_AF323390 Neotyphodium_tembladerae_AF457496 Neotyphodium_tembladerae_AF457497 Neotyphodium_typhinum_canariense_AF176266 Neotyphodium_uncinatum_L06946 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M4582] TITLE 'tefA Epichloe, Neotyphodium'; LINK TAXA = Taxa1; DIMENSIONS NCHAR=617; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Epichloe_amarillans_AF457504 CACGCATAATATCTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTTG-GGTGGGCAAGCAAGCGACTTGCCCGCCCACCAAAGCCCCTCTTTTTCGCCCGCGATAACGA--ATTTTTTTTTTT----T--CGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACTGGTCTTGAGCTAGAAGACGCAAACGAGAGA-----GACATGACATGACATTCGCGTGG--------------CCCCCCAA------AAAAAA-TTGTGATTAAAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACGCATTAGACTCT-TCTCACCCGATCTGCATCATTAACGTGCATC------------------ Epichloe_amarillans_AF457505 CACGCATAATATCTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTTG-G-TGGGCAAGCAAGCGACTTGCCCGCCCACCAAAGCCCCTCTTTTTCGCCCGCGATACTAA--TTTTTTTTTTTT----T--CGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACTGGTCTTGAGCTAGAAGACGCAAACGAGAGA-----GACATGACATGACATTCGCGTGG--------------CCCCCCAA------AAAAAA-TTGTGATTAAAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACGCAGTAGACTCT-TCTAACCCGATCTGCATCATTAACGTGCATC------------------ Epichloe_baconii_AF231193 CACGCATAATATCTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTTG-G-TGGGCAAGCAAGCGACTTT-------------GCCCCTCTTTT-CGCCCGCGATACGAA--TTTTTTTTTTTT----T--CGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACTGGTCTTGAGCTTGAAGACGCAAACGAGAGA-----GACAGAACATGACATTCGCGTGG--------------CCCCCCAA------AAAAAA-TTGCGATAAAAAATCACTGACTTGCCTTCGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCT-ACCAACCCGATCTGTATCATTAACGTGCATC------------------ Epichloe_baconii_AF231195 CACGCATAATATCTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTTG-G-TGGGCAAGCAAGCGACTTTT------------GCCCCTCTTTT-CGCCCGCGATACGAA--TTTTTTTTTTTT----T--CGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACTGGTCTTGAGCTTGAAGACGCAAACGAGAGA-----GACATGACATGACATTCGCGTGG--------------CCCCCCAA------AAAAAA-TTGCGATAAAAAATCACTGACTTGCCTTCGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCT-ACCAACCCGATCTGTATCATTAACGTGCATC------------------ Epichloe_baconii_AF231196 CACGCATAATATCTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTTG-G-TGGGCAAGCAAGCGACTTG--------------CCCCTCTTTTTCGCCCGCGATACGAA--ATTTTTTTTT---------CGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACTGGTCT-AAGCTAGAAGACGCAAAC--GAGA-----GACATGACATGACATTCGCGTGG--------------CCTCCCAA------AAAAAAATTGTGATGACAAATTACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGATACACTAGACTCT-ATCAACCCGATCTGTATCATTAACGTGCATC------------------ Epichloe_brachyelytri_AF231197 CACGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--AGTGGGCAAGCAAGCAT---------------CTGCCCCTCTTTT-CGCCCGCGATACGAA--TTTTTTTTT--------TTCGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACTTGGTCTGAGCTAGAGAC-GCAAACGAGAGAG-----ACATGACATGACATTCGCGTGA--------------CCTCCC-------AAAAAAAATTGTGATGACAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCT-ATCTACCCGATCTGTATCATTAACGTGCATC------------------ Epichloe_brachyelytri_AF231201 CACGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCAT---------------CTGCCCCTCTTTT-CGCCCGCGATACGAA--TTTTTTTTT--------TTCGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACTTGGTCTGAGCTAGAGAC-GCAAACGAGAGAG-----ACATGACATGACATTCGCGTGG--------------CCTCCC-------AAAAAAAATTGTGATGACAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCT-ATCTACCCGATCTGTATCATTAACGTGCATC------------------ Epichloe_bromicola_AY033356 CACGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCGAGCAAGCAT---------------CTGCCCCTCTTTT-CGCCCGCGATACGAA--CTTTTTTTT-------TTTCGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT-GGTCTAAGCTAGAGACCGCAAACGAGAGAG-----TCATGACATGACATTCGCGTGC--------------CCTCCC------AAAAAAAAAATGTGATGACAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCT-ATCAACCTGATCTGTATCACTAACGTGCATC------------------ Epichloe_bromicola_AY033357 CACGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCGAGCAAGCAT---------------CTGCCCCTCTTTT-CGCCCGCGATACGAA--CTTTTTTTT-------TTTCGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT-GGTCTAAGCTAGAGACCGCAAACGAGAGAG-----TCATGACATGACATTCGCGTGC--------------CCTCCC------AAAAAAAAAATGTGATGACAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCT-ATCAACCTGATCTGTATCACTAACGTGCATC------------------ Epichloe_clarkii_AF231206 CACGCATAATATGTGACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACCTCAAGGTGGGCAAGCAAGCGACT---------------GCCCCTCTCTT-CGCCCGCGATACGAA--TTTTTTTTTTT--------CGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACTGGTCT-GTGCTAGA-GACGCAAACGAGAGA-------TATAACATGACATTCGCGTGA--------------CCTCCCAA-------AAAAAT-TGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCT-ATCTACCCAATCTGTATCATTAACGCGCATC------------------ Epichloe_clarkii_AF231207 CACGCATAATATGTGACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACCTCAAGGTGGGCAAGCAAGCGACT---------------GCCCCTCTCTT-CGCCCGCGATACGAA--TTTTTTTTTTT--------CGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACTGGTCT-GTGCTAGA-GACGCAAACGAGAGA-------TATAACATGACATTCGCGTGA--------------CCTCCCAA-------AAAAAT-TGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCT-ATCTACCCAATCTGTATCATTAACGCGCATC------------------ Epichloe_elymi_AF457498 CACGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCAT---------------CTGCCCCTCTTTT-CGCCCGCGATACGAA--TTTTTTTTTTTT---TTTTCGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCTACCCGTCACT-GGTCTAAGCTAGAGAC-GCAAACGAGAGAG-----ACATGACATGGGATTCGCGTGG--------------CCTCCC-------AAAAAAAACTGTGATGACAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACACTAGACTCTTATCAACCCGATCTGTATCATTAACGTGCATC------------------ Epichloe_elymi_AF457502 CACGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCAT---------------CTGCCCCTCTTTT-CGCCCGCGATACGAA--TTTTTTTTTTTT---TTT-CGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCTACCCGTCACT-GGTCTAAGCTAGAGAC-GCAAACGAGAGAG-----ACATGACATGGGATTCGCGTGG--------------CCTCCC-------AAAAAAAACTGTGATGACAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACACTAGACTCTTATCAACCCGATCTGTATCATTAACGTGCATC------------------ Epichloe_festucae_AF231210 CACGCATAATATCCGATGTTCACTCGCTGCATTGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTTG-G-TGGGCAAGCAAGCGACTTG--------------CCCCTCTTTT-CGCCCGCGATACGAA--TTTTTTTTTTTT----T--CGG-------TCGCGGGG-CTCAGTATGACTTTTGGTGGGGCACCT-TCAACCCGTCACTGGTCTTGAGCTAAAAAACGCAAACGAGAAA-----GACATGACATGACATTCGCGTGGCCCACCTCTCCCCCCCCCCCCC------AA-CAAATTGTGATAAAAAATCACTGACCTCCCTGCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCC-ACCAACCCGATCTGTATCATTAACGTGCATC------------------ Epichloe_festucae_AF231212 CACGCATAATATCCGATGTTCACTCGCTGCATTGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTTG-G-TGGGCAAGCAAGCGACTTG--------------CCCCTCTTTT-CGCCCGCGATACGAA--TTTTTTTTTTTT----TTTCGG-------TCGCGGGG-CTCAGTATGACTTTTGGTGGGGCACCTCTCAACCCGTCACTGGTCTTGAGCTAAAAAACGCAAACGAGAAA-----GACATGACATGACATTCGCGTGGCCCACCTCTCCCCCCCCCCCCC------CAACAAATTGTGATAAAAAATCACTGACCTCCCTGCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCC-ACCAACCCGATCTGTATCATTAACGTGCATC------------------ Epichloe_glyceriae_AF231216 CGCGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCAAGCAA-----------CTGCCCCTCTTTT-CGCCCGCGATTCGAA--TTTTTTTTTT------TTTCGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT-GTTATGAGCTAGAGAC-GCAAACGAGAGAGACATGACATGGCATGACATTCGCGTGG--------------CCTCCC------AAAAAAAAACTGTGATGACAAATCACTGACTTGCCTTCGCTCTACAGGAAGCCGCCGAACTCGGAAAGGCTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTTTGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCC-ATCAACCCGATCTGTATCATTAACGTACATA------------------ Epichloe_glyceriae_AF231217 CGCGCATAATATGTGATGTTCAGTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCAAGCAA-----------CTGCCCCTCTTTT-CGCCCGCGATTCGAA--TTTTTTTTTT------TTTCGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT-GTTATGAGCTAGAGAC-GCAAACGAGAGAGACATGACATGGCATGACATTCGCGTGG--------------CCTCCC------AAAAAAAAACTGTGATGACAAATCACTGACTTGCCTTCGCTCTACAGGAAGCCGCCGAACTCGGAAAGGCTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTTTGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCC-ATCAACCCGATCTGTATCATTAACGTACATA------------------ Epichloe_sylvatica_AF231218 CACGCATAATATGTGACGTTCAGTCGTTGCAATGTGAGCCTGCCTTGCGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCGACT---------------GCCCCTCTTTT-CGCCCGCGATACGAA--ATTTTTTTTTTT----TT-CGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACTGGTCT-GTGCTAGA-GACGCAAACGAGAGA-------TATAACATGACATTCGCGTGA--------------CCTCCCAA-------AAAAAATTGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACAAATTAGACTCT-ATCGACCCGATCTGTATCATTAACGCGCATC------------------ Epichloe_sylvatica_AF231219 CACGCATAATATGTGACGTTCAGTCGTTGCAATGTGAGCCTGCCTTGCGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCGACT---------------GCCCCTCTTTT-CGCCCGCGATACGAA--ATTTTTTTTTTT----TT-CAG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACTGGTCT-GTGCTAGA-GACGCAAACGAGAGA-------TATAACATGACATTCGCGTGA--------------CCTCCCAA-------AAAAA-TTGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACAAATTAGACTCT-ATCTACCCGATCTGTATCATTAACGCGCATC------------------ Epichloe_typhina_AF231222 CACGCATAATATGTGACGTTCAGTCGTTGCAATGTGAGCCTGCCTTGCGTGTCGCTTTGCAACCTCAAGGTGGGCAAGCAAGCGACT---------------GCCCCTCTTTT-CGCCCGCGATACGAA--TTTTTTTTTTTT-------CGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACTGGTCT-GTGCTAGA-GACGCAAACGAGAGA-------TATAACATGACATTCGCGTGA--------------TCTCCCAA-------AAAAAAATGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTGGATTCT-ACCTACCCGATCTGTATCATTAACGCGCATC------------------ Epichloe_typhina_AF231223 CACGCATAATATGTGACGTTCAATCGTTGCAATGTGAGCCTGCCTTGCGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCGACT---------------GCCCCTCTTTT-CGACCGCGATACGAA----TTTTTTTTTT----TT-CGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACTGGTCT-GTGCTAGA-GACGCAAACGAGAGA-------TATAACATGACATTCGCGTGA--------------CGTCCCAA-------AAAAA-TTGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCCTGGTCGACAAATTAGACTAT-ATCTACCCGATCTGTATCATTAACGCGCATC------------------ Epichloe_typhina_AF231225 CACGCATAATATGTGACGTTCAGTCGTTGCAATTCGAGCCTGCCTTGCGTGTCGCTTTGCAACCTCAAGGTGGGCAAGCAAGCGACT---------------GCCCCTCTTTT-CGCCCGCGATACGAA--TTTTTTTTTTTT----T--CGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACTGGTCT-GTGCTAGA-GACGCAAACGAGAGA-------TATAACATGACATTCGCGTGA--------------TCTCCCAA-------AAAAAA-TGTGATGACAAATCACTGACTTGTCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTGGATTCT-ACCTACCCGATCTGTATCATTAACGCGCATC------------------ Epichloe_typhina_AF231228 CACGCATAATATGTGACGTTCAGTCGTTGCAACGCGAGCCTGCCTTGCGTGTCGCTTTGCAACTTCAAGGTGGGCAAGCAAGCGACT---------------GCCCCTCTTTT-CGCCCGCGATACGAA--TTTTTTTTTTTT----TTTTGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACTGGTCT-GTGCTAGA-GACGCAAACGAGAGA-------TATAACATGACATTCGCGTGA--------------CCTCCCAA-------AAAAAT-TGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTGGATTCT-ACCTACCCGATCTGTATCATTAACGCGCATC------------------ Epichloe_typhina_AF231229 CACGCATAATATGTGACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCGACT---------------GCCCCTCTTTT-CGCCCGCGATACGAA-ATTTTTTTTTTT--------CGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTTAACCCGTCACTGGTCT-GTGCTAGA-GACGCAAACGAGAGA-------TATAACATGACATTCGCGTGA--------------CCTCCCAA-------AAAAT--TGTGATGACAAATCACTGACTTGCGTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTCT-ATTTACCCGATCTGTATCATTAACGCGCATC------------------ Epichloe_typhina_AF231231 CACGCATAATATGTGACGTTCAGTCGTTGCAATGTGAGCCTGCCTTGCGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCGACT---------------GCTCCTCTTTT-CGCCCGCGATACGAG--TTTTTTTTTTTT----TTTCGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCATCTCTCAACCCGTCACTGGTCT-GTGCTAGA-GACGCAAACGAGAGA-------AATAACATGACATTCGCGTGA--------------CCTCCCAA-------AAAAT--TGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTCT-ATCTACCCGATCTGTATCATTAACGCGCATC------------------ Epichloe_yangzii_DQ134031 CACGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCGAGCAAGCAT---------------CTGCCCCTCTTTT-CGCCCGCGATACGAA--CTTTTTTTTTC-----TTTCGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT-GGTCTAAGCTAGAGAC-GCAAACGAGAGAGTCATGACATGACATGACATTCGCGTGC--------------CCTCCCCAA---AAAAAAAA-CTGTGATGACAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGCGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGTCTTGGTCGACACAGTAGACTCT-ATCAACCTGATCTGTATCACTAACGTGCATC------------------ Epichloe_yangzii_DQ134032 CACGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCGAGCAAGCAT---------------CTGCCCCTCTTTT-CGCCCGCGATACGAA--CTTTTTTTTTC-----TTTTCGGT-----TCGCGGGGGCTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT-GGTCTAAGCTAGAGAC-GCAAACGAGAGAGTCATGACATGACATGACATTCGCGTGC--------------CCTCCCCAA---AAAAAAAAACTGTGATGACAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGTCTTGGTCGACACAGTAGACTCT-ATCAACCTGATCTGTATCACTGACGTGCATC------------------ Neotyphodium_Fnj4602_copy1_FJ211201 CACGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCGAGCAAGCAT---------------CTGCCCCTCTTTTTCGCCCGCGATACGAA--TTTTTTTTT-------TTTCGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT-GGTCTAAGCTAGAGAC-GCAAACGAGAGAG-----GCATGACATGACATTCGCGTGC--------------CCTCCCCAA---AAAAAAAA-TTGTGATGACAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCT-ATCAACATGATCTGTATCACTAACGTGCATC------------------ Neotyphodium_Fnj4602_copy2_FJ211202 CACGCATAATATGTGACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCGACT---------------GCCCCTCTTTT-CGCCCGCGATACGA---TTTTTTTTTTTT----TTTCGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACTGGTCT-GTGCTAGA-GACGCAAACGAGAGA-------AATAACATGACATTCGCGTGA--------------CCTCCCAA-------AAAAT--TGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTCT-ATCTACCCGATCTGTATCATTAACGCGCATC------------------ Neotyphodium_Fnj4603_copy1_FJ211203 CACGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCGAGCAAGCAT---------------CTGCCCCTCTTTT-CGCCCGCGATACGAA--TTTTTTTTT-------TT-CGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT-GGTCTAAGCTAGAGAT-GCAAACGAGAGAG-----GCATGACATGACATTCGCGTGC--------------CCTCCCCAA---AAAAAAAA-TTGTGATGACAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCT-ATCAACATGATCTGTATCACTAACGTGCATC------------------ Neotyphodium_Fnj4603_copy2_FJ211204 CACGCATAATATGTGACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCGACT---------------GCCCCTCTTTT-CGCCCGCGATACGA---TTTTTTTTTTTT----TTTCGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACTGGTCT-GTGCTAGA-GACGCAAACGAGAGA-------AATAACATGACATTCGCGTGA--------------CCTCCCAA-------AAAAT--TGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTCT-ATCTACCCGATCTGTATCATTAACGCGCATC------------------ Neotyphodium_Fnj4604_copy1_FJ211205 CACGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCGAGCAAGCAT---------------CTGCCCCTCTTTT-CGCCCGCGATACGAA--TTTTTTTTT-------TT-CGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT-GGTCTAAGCTAGAGAC-GCAAACGAGAGAG-----GCATGACATGACATTCGCGTGC--------------CCTCCCCAA---AAAAAAAAATTGTGATGACAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCT-ATCAACATGATCTGTATCACTAACGTGCATC------------------ Neotyphodium_Fnj4604_copy2_FJ211206 CACGCATAATATGTGACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCGACT---------------GCCCCTCTTTT-CGCCCGCGATACGA---TTTTTTTTTTTT----TTTCGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACTGGTCT-GTGCTAGA-GACGCAAACGAGAGA-------AATAACATGACATTCGCGTGA--------------CCTCCCAA-------AAAAT--TGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTCT-ATCTACCCGATCTGTATCATTAACGCGCATC------------------ Neotyphodium_Fnj6605_copy1_FJ211207 CACGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCGAGCAAGCAT---------------CTGCCCCTCTTTT-CGCCCGCGATACGAA--TTTTTTTTT-------TT-CGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT-GGTCTAAGCTAGAGAC-GCAAACGAGAGAG-----GCATGACATGACATTCGCGTGC--------------CCTCCCCAA---AAAAAAAA-TTGTGATGACAAATCACTGACTTGCCTTTGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCT-ATCAACATGATCTGTATCACTAACGTGCATC------------------ Neotyphodium_Fnj6605_copy2_FJ211208 CACGCATAATATGTGACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCGACT---------------GCCCCTCTTTT-CGCCCGCGATACGA--TTTTTTTTTTTTT----TTTCGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACTGGTCT-GTGCTAGA-GACGCAAACGAGAGA-------AATAACATGACATTCGCGTGA--------------CCTCCCAA-------AAAAT--TGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTCT-ATCTACCCGATCTGTATCATTAACGCGCATC------------------ Neotyphodium_Fnj6606_copy1_FJ211209 CACGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCGAGCAAGCAT---------------CTGCCCCTCTTTT-CGCCCGCGATACGAA--TTTTTTTTT-------TTTCGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT-GGTCTAAGCTAGAGAC-GCAAACGAGAGAG-----GCATGACATGACATTCGCGTGC--------------CCTCCCCAA---AAAAAAAA-TTGTGATGACAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCT-ATCAACATGATCTGTATCACTAACGTGCATC------------------ Neotyphodium_Fnj6606_copy2_FJ211210 CACGCATAATATGTGACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCGACT---------------GCCCCTCTTTT-CGCCCGCGATACGA--TTTTTTTTTTTTT----TTTCGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACTGGTCT-GTGCTAGA-GACGCAAACGAGAGA-------AATAACATGACATTCGCGTGA--------------CCTCCCAA-------AAAAT--TGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTCT-ATCTACCCGATCTGTATCATTAACGCGCATC------------------ Neotyphodium_Rnj6105_copy1_EU409300 CACGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCGAGCAAGCAT---------------CTGCCCCTCTTTT-CGCCCGCGATACGAA--TTTTTTTTT-------TT-CGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCTCCTCTCAACCCGTCACT-GGTCTAAGCTAGAGAC-GCAAACGAGAGAG-----GCATGACATGACATTCGCGTGC--------------CCTCCC-AA---AAAAAAAA-TTGTGATGACAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCT-ATCAACCTGATCTGTATCACTAACGTGCATC------------------ Neotyphodium_Rnj6105_copy2_FJ189477 CACGCATAAAATGTGACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCGACT---------------GCCCCTCTTTT-CGCCCGCGATACGA---TTTTTTTTTTTT----TTTCGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACTGGTCT-GTGCTAGA-GACGCAAACGAGAGA-------AATAACATGACATTCGCGTGA--------------CCTCCCAA-------AAAAT--TGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTCT-ATCTACCCGATCTGTATCATTAACGCGCATC------------------ Neotyphodium_Rxy6106_copy1_EU409302 CACGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCGAGCAAGCAT---------------CTGCCCCTCTTTT-CGCCCGCGATACGAA--TTTTTTTTT-------TT-CGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCTCCTCTCAACCCGTCACT-GGTCTAAGCTAGAGAC-GCAAACGAGAGAG-----GCATGACATGACATTCGCGTGC--------------CCTCCC-AA---AAAAAAA--TTGTGATGACAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCT-ATCAACCTGATCTGTATCACTAACGTGCATC------------------ Neotyphodium_Rxy6106_copy2_FJ189478 CACGCATAATATGTGACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCGACT---------------GCCCCTCTTTT-CGCCCGCGATACGA--TTTTTTTTTTTTT----TTTCGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGTGGCACCTCTCAACCCGTCACTGGTCT-GTGCTAGA-GACGCAAGCGAGAGA-------AATAACATGACATTCGCGTGA--------------CCTCCCAA-------AAAAT--TGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTCT-ATCTACCCGATCTGTATCATTAACGCGCATC------------------ Neotyphodium_aotearoae_AF323391 CACGCATAATATGTGACGTTCACTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACCTT--TGTGGGCAAGCAAGCGACT---------------GCCCCTCTTTT-CGCCCGCGATACGAA----TTTTTTTTTT-------CGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACTTCTCAACCCGTCACTGGTCT-GAGCTAGA-GACGCAAACGAGAGA-------CATAACATGACATTCGCGTGA--------------CCTCCCAA-------AAAAATTGTTGATGACAAATCACTGACTTGCCTTCGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACATATTAGACTCT-ATCTACCCGATCTGTATCATTAACGCGCATC------------------ Neotyphodium_australiense_AF323400 CACGCATAATATCCGATGTTCACTCGCTGCATTGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTTG-G-TGGGCAAGCAAGCGACTTG--------------CCCCTCTTTT-CGCCCGCGATACGAA--TTTTTTTTTT---------CGG-------TCGCGGGG-CTCAGTATGACTTTTGGTGGGGCACCTCTCAACCCGTCACTGGTCTTGAGCTAAAAAACGCAAACGAGAAA-----GACATGACATGACATTCGCGTGGCCCACCTCTCCCCCCCCCCCT--------AACAAATTGTGATAAAAAATCACTGACCTCCCTGCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCC-ATCAACCCGATCTGTATCATTAACGTGCATC------------------ Neotyphodium_australiense_AF323402 CACGCATAATATGTGACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCGACT---------------GCCCCTCTTTT-CGCCCGCGATACGA--TTTTTTTTTTTTT----TTTCGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACTGGTCT-GTGCTAGA-GACGCAAACGAGAGA-------AATAACATGACATTCGCGTGA--------------CCTCCCAA-------AAAAT--TGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTCT-ATCTACCCGATCTGTATCATTAACGCGCATC------------------ Neotyphodium_chisosum_AF457508 CACGCATAATATCTGATGTTCACTCGTTGCAATGCGAGCCTGCTTTGTGTGTCGCTTTGCAACCTTG-G-TGGGCAAGTAAGCGACTTGCCCGCCCACCAAAGCCCCTCTTTTTCGCCCGCGATACGAA--ATTTTTTTTTT--------CGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACTGGTCTTGAGCTAGAAGACGCAAACGAGAGA-----GACATGACATGACATTCGCGTGG--------------CCCCCCAA------AAAAAA-TTGTGATTAAAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCTCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGATGCACTAGACTCT-?TCAACCCGATCTGCATCAATAACGTGCATC------------------ Neotyphodium_chisosum_AF457509 CACGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCGAGCAAGCAT---------------CTGCCCCTCTTTT-CGCCCGCGATACGAA--TATTTTTTT-------TT-CGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT-GGTCTAAGCTAGAGAC-GCAAACGAGAGAG-----GCATGACATGACATTCGCGTGC--------------CCTCCC------AAAAAAAA-TTGTGATGACAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCT-ATCAACCTGATCTGTATCACTAACGTGCATC------------------ Neotyphodium_chisosum_AF457510 CACGCATAATATGTGACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCGACT---------------GCCCCTCTTTT-CGCCCGCGATACGAGTTTTTTTTTTTTTT----TTTCGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACTGGTCT-GTGCTAGA-GACGCAAACGAGAGA-------AATAACATGACATTCGCGTGA--------------CCTCCCAA-------AAAAT--TGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTCT-ATCTACCCGATCTGTATCATTAACGCGCATC------------------ Neotyphodium_coenophialum_AF457511 CACGCATGATATCCGATGTTCACTCGCTGCATTGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTTG-G-TGGGCAAGCAAGCGACTTG--------------CCCCTCTTTT-CGCCCGCGATACGAA--TTTTTTTTTTTT----C---GG-------TCGCGGGG-CTCAGTATGACTTTTGGTGGGGCACCTCTCAACCCGTCACTGGTCTTGAGCTAAAAAACGCAAACGAGAAA-----GACATGACATGACATTCGCGTGGCCCACCTCTCCCCCCCCCCCC--------AACAAATTGTGATAAAAAATCACTGACCTCCCTGCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCC-ACCAACCCGATCTGTATCATTAACGTGCATC------------------ Neotyphodium_coenophialum_AF457512 CACGCATAATATCTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTTG-G-TGGGCAAGCAAGCGACTTT-------------GCCCCTCTTTT-CGCCCGCGATACGAA--TTTTTTTTTTTT-------CGG-------TCGCGGGG-CTCAGTCTGACTCTTGGTGGGGCACCTCTCAACCCGTCACTGGTCTTGAGCTAGAAGACGCAAACAAGAGA-----GACATGACATGACATTCGCGGGGC-------------CCCCCCAA------AAAAAAATTGTGATAAAAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACTGTCATTGGTAAGCCTTGGTCGACACGTTAGACTCT-ACCAACCCGATCTGTATCATTAACGTGCATC------------------ Neotyphodium_gansuense_inebrians_AF457538 CACGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCC------------CGCTATGCGACCTT--GGTGGGCAAACAACTG-------------------CCCCTCTTTT-CGGCCGCCATTTGATTTTTTTTTTTTTTTTGGGGGGGGGGGGGGGCTCTCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCT--CAACCCCTCACTGGTCT-GGGCTAGA-GACGCAAACGAGAGAG-----ACGTGACAGGACATTCGCGTGG--------------CCTTCCAAAAAAAAAAAAAAATTGTGATGACGAATCACTGACTTGCCTTCGCTCTCTAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGGCACATTATACTCTTATCAACCCGATCTGTATCATTAACATGCATT------------------ Neotyphodium_gansuense_inebrians_AF457539 CACGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCC------------CGCTATGCGACCTT--GGTGGGCAAACAACTG-------------------CCCCTCTTTT-CGGCCGCCATTTGATTTTTTTTTTTTTTTTGGGGGGGGGGGGGG-CTCTCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCT--CAACCCCTCACTGGTCT-GGGCTAGA-GACGCAAACGAGAGAG-----ACGTGACAGGACATTCGCGTGG--------------CCTTCCAAAAAAAAAAAAAAATTGTGATGACGAATCACTGACTTGCCTTCGCTCTCTAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGGCACATTATACTCTTATCAACCCGATCTGTATCATTAACATGCATT------------------ Neotyphodium_huerfanum_AF457537 CACGCATAATATGTGACGTATAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCGACT---------------GCCCCTCTTTT-CGCCCGCGATACGAA-AATTTTTTTTTTT----TT-CGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACTGGTCT-GTGCTAGA-GACGCAAACGAGAGA-------TATAACATGACATTCGCGTGA--------------CCTCCCAA-------AAAAT--TGTGATGACAAATCACTGACTTGCGTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTCT-ATTTACCCGAT--GTATCATTAACGCGCATC------------------ Neotyphodium_lolii_AF457540 CACGCATAATATCCGATGTTCACTCGCTGCATTGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTTG-G-TGGGCAAGCAAGCGACTTG--------------CCCCTCTTTT-CGCCCGCGATACGAA--TTTTTTTTTTTT----T--CGG-------TCGCGGGG-CTCAGTATGACTTTTGGTGGGGCACCTCTCAACCCGTCACTGGTCTTGAGCTAAAAAACGCAAACGAGAAA-----GACATGA-------TTCGCGTGGCCCACCTCTCCCCCCCCCCCCC------AAACAAATTGTGATAAAAAATCACTGACCTCCCTGCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCC-ACCAACCCGATCTGTATCATTAACGTGCATC------------------ Neotyphodium_melicicola_AF323406 CACGCATAATATGTGACGTTCACTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACCTT--TGTGGGCAAGCAAGCGACT---------------GCCCCTCTTTT-CGCCCGCGATACGAA----TTTTTTTTTT-------CGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACTTCTCAACCCGTCACTGGTCT-GAGCTAGA-GACGCAAACGAGAGA-------CATAACATGACATTCGCGTGA--------------CCTCCCAA-------AAAAATCGTTGATGACAAATCACTGACTTGCCTTCGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACATATTAGACTCT-ATCTACCCGATCTGTATCATTAACGCGCATC------------------ Neotyphodium_occultans_AF457541 CACGCATAATATCTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTTG-G-TGGGCAAGCAAGCGACTTT-------------GCCCCTCTTTT-CGCCCGCGATACGAA--ATTTTTTTTT---------CGG-------TCGCGGGG-CTCAGTCTGACTCTTGGTGGGGCACCTCTCAACCCGTCACTGGTCTTGAGCTAGAAGACGCAAACAAGAGA-----GACATGACATGACATTCGCGGGGG-------------CCCCCCAA------AAAAAA-TTGTGATAAAAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACTGTCATTGGTAAGCCTTGGTCGACACATTAGACTCT-ACCAACCCGATCTGTATCATTAACGTGCATC------------------ Neotyphodium_occultans_AF457542 CACGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCGAGCAAGCAT---------------CTGCCCCTCTTTT-CGCCCGCGATACGAA--CTTTTTTTT-------TTTCGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT-GGTCTAAGCTAGAGAC-GCAAACGAGAG-------TCATGACATGACATTCGCGTGC--------------CCTCCC------AAAAAAAAACTGTGATGACAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTTGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCT-ATCAACCTGATCTGTATCACTAACGTGCATC------------------ Neotyphodium_siegelii_AF308132 CACGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCGAGCAAGCAT---------------CTGCCCCTCTTTT-CGCCCGCGATACGAA--CTTTTTTTTTTTTTTTTTTTTCGG-----TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT-GGTCTAAGCTAGAGAC-GCAAACGAGAGAG-----TCATGACATGACATTCGCGTGC--------------CCTCCC------AAAAAAAAACTGTGATGACAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCT-ATCAACCTGATCTGTATCACTAACGTGCATC------------------ Neotyphodium_siegelii_AF308133 CACGCATAATATCCGATGTTCACTCGCTGCATTGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTTG-G-TGGGCAAGCAAGCGACTTG--------------CCCCTCTTTT-CGCCCGCGATACGAA--TTTTTTTTTTT--------CGG-------TCGCGGGG-CTCAGTATGACTTTTGGTGGGGCACCTCTCAACCCGTCACTGGTCTTGAGCTAAAAAACGCAAACGAGAAAA----GACATGACATGACATTCGCTTGGCCCACCTCTCCCCCCCCCCTCCC---CCAAACAAATTGTGATAAAAAATCACTGACCTCCCTGCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCC-ATCAACCCGATCTGTATCATTAACGTGCATC------------------ Neotyphodium_tembladerae_AF323407 CACGCATAATATCCGATGTTCACTCGCTGCATTGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTTG-G-TGGGCAAGCAAGCGACTTG--------------CCCCTCTTTT-CGCCCGCGATACGAA--TTTTTTTTTTTT----T--CGG-------TCGCGGGG-CTCAGTATGACTTTTGGTGGGGCACCTCTCAACCCGTCACTGGTCTTGAGCTAAAAAACGCAAACGAGAAA-----GACATGACATGACATTCGCGTGGCCCACCTCTCCCCCCCCCCC---------AACAAATTGTGATAAAAAATCACTGACCTCCCTGCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACAACGCTCCCGGTCACCGTGATTTCATCAAGAACATGATTACTGGTACTTCCCAGGCTGACTTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCC-ACCAACCCGATCTGTATCATTAACGTGCATC------------------ Neotyphodium_tembladerae_AF323408 CACGCATAATATGTGACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCGACT---------------GCCCCTCTTTT-CGCCCGCGATACGAA-ATTTTTTTTTTTT----TTTCGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACTGGTCT-GTGCTAGA-GACGCAAACGAGAGA-------TATAACATGACATTCGCGTGA--------------CCTCCCAA-------TAAAT--TGTGATGACAAATCACTGACTTGCGTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTCT-ATTTACCCGAT--GTATCATTAACGCGCATC------------------ Neotyphodium_tembladerae_AF457544 CACGCATAATATGTGACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCGACT---------------GCCCCTCTTTT-CGCCCGCGATACGAA-ATTTTTTTTTTTT----TTTCGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACTGGTCT-GTGCTAGA-GACGCAAACGAGAGA-------TATAACATGACATTCGCGTGA--------------CCTCCCAA-------TAAAT--TGTGATGACAAATCACTGACTTGCGTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTCT-ATTTACCCGAT--GTATCATTAACGCGCATC------------------ Neotyphodium_tembladerae_AF457545 CACGCATAATATCCGATGTTCACTCGCTGCATTGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTTG-G-TGGGCAAGCAAGCGACTTG--------------CCCCTCTTTT-CGCCCGCGATACGAA--ATTTTTTTTTTT----T--CGG-------TCGCGGGG-CTCAGTATGACTTTTGGTGGGGCACCTCTCAACCCGTCACTGGTCTTGAGCTAAAAAACGCAAACGAGAAA-----GACATGACATGACATTCGCGTGGCCCACCTCTCCCCCCCCCCC---------AACAAATTGTGATAAAAAATCACTGACCTCCCTGCGCTCTATAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACATTAGACTCC-ACCAACCCGATCTGTATCATTAACGTGCATC------------------ Neotyphodium_typhinum_canariense_AF457543 CACGCATAATATGTGACGTTCAGTCGTTGCAATGCGAGCCTGCCTTGCGTGTCGCTTTGCAACCTT--GGTGGGCAAGCAAGCGACT---------------GCCCCTCTTTT-CGCCCGCGATACG---ATTTTTTTTTTTT-------CGG-------TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACTGGTCT-GTGCTAGA-GACGCAAACGAGAGA-------TATAACATGACATTCGCGTGA--------------CCTCCCAA-------AAAAC--TGTGATGACAAATCACTGACTTGCCTTTGCTCTACAGGAAGCCGCCGAACTCGGAAAGGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGATCGACACATTAGACTCT-ATTTACCCGATCTGTATCATTAACGCGCATC------------------ Neotyphodium_uncinatum_AF308131 CACGCATAATATGTGATGTTCACTCGTTGCAATGCGAGCCTGCCTTGTGTGTCGCTTTGCAACCTT--GGTGGGCGAGCAAGCAT---------------CTGCCCCTCTTTT-CGCCCGCGATACGAA--CTTTTTTTTTT-----TTTTTCGG-----TCGCGGGG-CTCAGTCTGACTTTTGGTGGGGCACCTCTCAACCCGTCACT-GGT?TAAGCTAGAGAC-GCAAACGAGAGAG-----TCATGACATGACATTCGCGTGC--------------CCTCCC--A---AAAAAAAAACTGTGATGACAAATCACTGACTTGCCTTCGCTCTATAGGAAGCCGCCGAACTCGGAAAAGGTTCTTTCAAATATGCGTGGGTTCTTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACCATCGACA-----------------------------------------------------------TTGCCCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGGTAAGCCTTGGTCGACACAGTAGACTCT-ATCAACCTGATCTGTATCACTAACGTGCATC------------------ ; END; BEGIN CODONS; CODONPOSSET CodonPositions (CHARACTERS = 'tefA Epichloe, Neotyphodium') = N: 1-617; CODONPOSSET * CodonPositions (CHARACTERS = 'tefA Epichloe, Neotyphodium') = N: 1-617; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M4589] TITLE 'tubB, Epichloe Neotyphodium'; LINK TAXA = Taxa2; DIMENSIONS NCHAR=517; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] Epichloe_amarillans_AF062426 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AACGAACA-GTCGTGATGAGAGGCGGACCGAGACAAAAT-----GAACGAATGCGGTATT-CGAGAACTGT-AGCTGACCTGTTTCTTTCCCTCTTTTCCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACAG----GCACAAACAGCA--TGAAAAA-CTCACATTCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATATCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTTGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTACATACATACCGCCCCGGAGATGAGA---CGGAAAGAGAACGAGAGAAAAAG- Epichloe_amarillans_AF457466 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AACGAACA-GTCGTGATGAGAGGCGGACCGAGACAAAAT-----TAACGAATGCGGTATT-CGAGAACTGT-AGCTGACCGTTTTCTTTCCCTCTTTTCCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACAG----GCACAAACAACA--TGAAAAA-CTCACATTCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTTGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTACATACATACCGCCCCGGAGATGAGA---CGGAAAGAGAACGAGAGAAAAAG- Epichloe_baconii_AF250733 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AACGAACA-GTCGTGATGAGAGGCGGATCGAGACAAAAT-----TAATGAATGCGGTATT-CGAGAACTGT-AGCTGACCTGTTTCTTTCCCTCTTTTCTCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-GCCGACCTCGAACGACAG----GCACAAACAGCA--TGAAAAA-CTCACATTCTTTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCGTTGAGCTACATACATACCGCCCCGGAGATGAGA---CGGAAAAAGAACGAAAGAAAAAG- Epichloe_baconii_L06961 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AACGAACA-GTCGTGATGAGAGGCGGATCGAGACAAAAT-----TAATGAATGCGGTATT-CGAGAACTGT-AGCTGACCTGTTTCTTTCCCTCTTTTCACCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-GCCGACCTCGAACGACAG----GCACAAACAGCA--TGAAAAA-CTCACATTCTTTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCGTTGAGCTACATACATACCGCCCCGGAGATGAGA---CGGAAAAAGAACGAAAGAAAAAG- Epichloe_baconii_L78270 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AACGAACA-GTCGTGATGAGAGGCGGACCGAGACAAAAT-----TAATGAATGCGGTATT-CGAGAACTGT-AGCTGACCTGTTTCTTTCCCTCTTTTCCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCAAACGACGG----GCACAAACAGCA--TGAAAAA-CTCACATTCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTACATACATACCGCCCCGGAGATGAGA---CGGGAAGAGAACGAAAGAAAAAG- Epichloe_brachyelytri_AF250736 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGAACCCCGCCGAGTG-----CGGCCACGACGTGCACGCCC-------AACGGACA-GTCGTGATGAGAGGCGGACCGAGACAAAAT-----TCATGAATGCGGTATT-CGAGAACTGT-AGCTGACCTTTTTCTTTC----------CCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGGACGACAG----GCACAAATAACA--TGAAAAA-CTCACATTTATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA---CGGAAAGAGAAGGAAAGAAAAAG- Epichloe_brachyelytri_L78271 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGAACCCCGCCGAGTG-----CGGCCACGACGTGCACGCCC-------AACGGACA-GTCGTGATGAGAGGCGGACCGAGACAAAAT-----TCATGAATGCGGTATT-CGAGAACTGT-AGCTGACCTTTTTCTTTC----------CCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGGACGACAG----GCACAAATAACA--TGAAAAA-CTCACATTTATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA---CGGAAAGAGAAGGAAAGAAAAAG- Epichloe_bromicola_AY033382 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AATGAACA-GTCGTGATGAGAGGCGGACCGAGACAAAAAAAA--TAATGATTGCGGTATT-CGAGAACTGT-AGCTGACCTTTTCCTTCC----------CCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACAG----GCACAAATAACACATGGAAAA-CTCACATTTCTTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAACGGTACCTCCGAGCTCCAGCTGGAGCGTATGAGCGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTGCATAC----CGCCCTGGAGATGAGA---CGGAAAGAGAACGATAAAAAGTG- Epichloe_bromicola_AY033383 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AATGAACA-GTCGTGATGAGAGGCGGACCGAGACAAAAAAAA--TAATGATTGCGGTATT-CGAGAACTGT-AGCTGACCTTTTCCTTCC----------CCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACAG----GCACAAATAACACATGGAAAA-CTCACATTTCTTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAACGGTACCTCCGAGCTCCAGCTGGAGCGTATGAGCGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTGCATAC----CGCCCTGGAGATGAGA---CGGAAAGAGAACGATAAAAAGTG- Epichloe_clarkii_AF250738 CCCCTCCCTCGACGCGTTCCAGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AACGGACAAGTCGTGATGAGAGGCGGACCGAGACAACAT-----TGATGAATGCGGTATT-CGAAAACCGT-AGCTGACCTTTTTT--CT-------TTGCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACA----GGCACAAATAACA--TGAAAAA-CTCACATTGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTCTTCATAATCTACAAAAGTCTCCATTGAGCTACATAC----TGCCCTGGAGATGGGG---CGGGAGAAGATGGAAAGGAAAAG- Epichloe_clarkii_L78281 CCCCTCCCTCGACGCGTTCCAGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AACGGACAAGTCGTGATGAGAGGCGGACCGAGACAACAT-----TGATGAATGCGGTATT-CGAAAACCGT-AGCTGACCTTTTTT--CT-------TTGCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACA----GGCACAAATAACA--TGAAAAA-CTCACATTGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTCTTCATAATCTACAAAAGTCTCCATTGAGCTACATAC----TGCCCTGGAGATGGGG---CGGGAGAAGATGGAAAGGAAAAG- Epichloe_elymi_AF062428 CACCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AATGGACAAGTCGTGATGAGAGGCGGACCGAGACAAAAAAT---TAATGATTGCGGTATT-CGAGAACTGTTAGCTGACCTTTTTCTTCC----------CCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTAGAACGACGG----GCACAAATAACA--TGAAAAA-CTCACATTTATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTGGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA---CGGAAAGAGAACGAAAGAAAAAG- Epichloe_elymi_AF457468 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AATGGACAAGTCGTGATGAGAGGCGGACCGAGACAAAAAAT---TAATGATTGCGGTATT-CGAGAACTGTTAGCTGACCTTTTTCTTCC----------CCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTAGAACGACGG----GCACAAATAACA--TGAAAAA-CTCACATTTATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTGGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA---CGGAAAGAGAACGAAAGAAAAAG- Epichloe_festucae_L06955 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGAAGTGCACGCCC-------AACGAACA-GTCGTGATGAGAGGCGGACCGAGACAAAAT-----TAATGAATGCGGTATT-CGAGAACTGT-AGCTGACCTGTTTCTTTCCCTCTTTTCCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATTCGCCGACCTCGAACGACAG----GCACAAACAGCA--TGAAAAA-CTCACATTCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTACATACATACCGCCCCGGAGATGGGA---CGGAAAGAGAACGAAAGAAAAAG- Epichloe_festucae_L78286 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGAAGTGCACGCCC-------AACGAACA-GTCGTGATGAGAGGCGGACCGAGACAAAAT-----TAATGAATGCGGTATT-CGAGAACTGT-AGCTGACCTGTTTCTTTCCCTCTTTTCCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATTCGCCGACCTCGAACGACAG----GCACAAACAGCA--TGAAAAA-CTCACATTCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTACATACATACCGCCCCGGAGATGGGA---CGGAAAGAGAACGAAAGAAAAAG- Epichloe_glyceriae_L78275 GGACCCCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AATGGACA-GTCGTGATGAGAGGCGGATCGAGACAAAAT-----TAAAGATTGCGGTATT-CGAGAACTGT-AGCTGACCTTTTTCTTCCTCTCTTCTCCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATTCGCCGACCTCGAGCGACAG----GCACCAATAACA--TGAAAAA-CTCACATTTATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTATATAC----CGCCCTGGAGATGAGA---CGGAAAGAGAACGAAAGAAAAAG- Epichloe_glyceriae_L78276 GGACCCCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AATGGACA-GTCGTGATGAGAGGCGGATCGAGACAAAAT-----TAAAGATTGCGGTATT-CGAGAACTGT-AGCTGACCTTTTTCTTCCCCTCTTCTCCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATTCGCCGACCTCGAGCGACAG----GCACCAATAACA--TGAAAAA-CTCACATTTATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTATATAC----CGCCCTGGAGATGAGA---CGGAAAGAGAACGAAAGAAAAAG- Epichloe_sylvatica_L78278 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AACGGACA-GTAGTGATGAGAGGCGGACCGAGACAACAT-----TAATGAATGCGGTATT-CGAAAACCGT-AGCTGACCTTTTTC---T-------TTCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACA----GGCACAAATAACA--TGAAAAA-CTCACATTGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCGGAGCTCCAGCTCGAGCGCATGAGTGTCTACTTCAACGAGGCAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTACATAC----CGCCCTGGAGATGGGA---CGGAAAAAGAAGGAAAGAAAAAG- Epichloe_sylvatica_L78291 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AACGGACAAGTCATGATGAGAGGCGGACCGAGACAACAT-----TAATGAATGCGGTATT-CGAAAACCGT-AGCTGACCTTTTTC---T-------TTCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACA----GGCACAAATAACA--TGAAAAA-CTCACATTGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTACATAC----CGCCCTGGAGATGGGA---CGGAAAAAGAAGGAAAGAAAAAG- Epichloe_typhina_AF062429 CCCCCTCCTCGACGCGTTCCGGTGT----CGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AACGGACA-GTCGTGATGAGAGGCGGACCGAGACAACAT-----CATTGAATGCGGTATT-CGAGAACTGT-AGCTGACCTTTTT---CT-------TTCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCTGCCGACCTCGAACGACA----GGCACAAATAACA--TGAAAAA-CTCACATTGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGT-------------------CTCCATTGAGCTACATAC----CGCCCTGGAGATGGGA---CGGAAAAAGAAGGAAAGAAAAAG- Epichloe_typhina_L78274 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AACGGACAAGTCGTGATGAGAGGCGGACCGAGACAACAT-----TGATGAATGCGGTATT-CGAAAACCGT-AGCTGACCTTTTTT--CT-------TTGCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACA----GGCACAAATAACA--TGAAAAAACTCACATTGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTCTTCATAATCTAAAAAAGTCTCTATTGAGCTACATAC----CGCCCCGGAGATGGGA---CGGGAAAAGAAGCAAATAAAACG- Epichloe_typhina_L78284 CCCCCTCCTCGATGCGTTCCGGTGT----CGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AACGGACA-GTCGTGATGAGAGGCGGACCGAGACAACAT-----CATTGAATGCGGTATT-CGAGAACTGT-AGCTGACCTTTTT---CT-------TTCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACA----GGCACAAATAACA--TGAAAAA-CTCACATTGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGT-------------------CTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA---CGGAAAGAGAAGGAAAGAAAAAG- Epichloe_typhina_L78285 CCCCCTCCTCGACGCGTTCCCGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCCGAGCCCGGCCACGACGTGCACGCCC-------AACGGACAAGTCGTGATGAGAGGCGGGCCGAGACAACAT-----TGATGAATGCTGTATT-CGAAAACCGT-AGCTGACCTTTTTTTTCT-------TTGCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACA----GGCACAAATAACA--TGAAAAA-CTCACATTGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTCTTCATAATCTAAAAAAGTCCCCATTGAGCTACATAC----CGCCCTGGAGATTGGA---CAGGAAAAGATGGAAAGAAAAAG- Epichloe_typhina_L78288 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AACGGACAAGTCGTGATGAGAGGCGGACCGAGACAACAT-----TGATGAACGCGGTATT-CGAAAACCGT-AGCTGACTTTTTTA---T-------TTCCCTCTAGGTTCATCTTCAAACCGGCCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACAA---GGCACAGATAACA--TGAAAAA-CTCACATTGACTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTCTTCATAATCTAAAAAAGTCTCCATTGAGCTACATAC----CGCCCTGGAGATGGGA---CGGGAAAAGAAGCGAAGAAAAAG- Epichloe_typhina_L78292 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AACGGACAAGTCATGATGAGAGGCGGACCGAGACAACAT-----TAATGAATGCGGTATT-CGAAAACCGT-AGCTGACCTTTTTC---T-------TTCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACA----GGCACAAATAACA--TGAAAAA-CTCACATTGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTACATAC----CGCCCTGGAGATGGGA---CGGAAAAAGAGGGAAAGAAAAAG- Epichloe_yangzii_DQ134037 CCCCCTCCTCGACGCGTTCCGGTGTTGATTGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AATGAACA-GTCGTGATGAGAGGCGGACCGAGACAAAAAAAAA-TGATGATTGCGGTATT-CGAGAACTGT-AGCTGACCTTTTCCTTCC----------CCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACAG----GCACAAACAACACATGAAAAA-CTCACATTTCTTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAACGGTACCTCCGAGCTCCAGCTGGAGCGTATGAGCGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTACATAC----CGCCCTGGAGATGAGATTTCGGAAAGAGAACGATAAAAAGTG- Epichloe_yangzii_DQ134038 CCCCCTCCTCGACGCGTTCCGGTGTTGATTGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AATGAACA-GTCGTGATGAGAGGCGGACCGAGACAAAAAAAAA-TGATGATTGCGGTATT-CGAGAACTGT-AGCTGACCTTTTCCTTCC----------CCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACAG----GCACAAACAACACATGAAAAA-CTCACATTTCTTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAACGGTACCTCCGAGCTCCAGCTGGAGCGTATGAGCGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTACATAC----CGCCCTGGAGATGAGATTTCGGAAAGAGAACGATAAAAAGTG- Neotyphodium_Fnj4602_copy1_FJ211211 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AATGAACA-GTCGTGATGAGAGGCGGACCGAGACAAAAAAAAA-TGATGATTGCGGTATT-CGAGAACTGT-AGCTGACCTTTTCCTTCC----------CCCCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACAG----GCACAAACAACACATGAAAAA-CTCACATTTCTTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAACGGTACCTCCGAGCTCCAGCTGGAGCGTATGAGCGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA---CGGAAAGAGAACGATAAAAAGTG- Neotyphodium_Fnj4602_copy2_FJ211212 CCCCCTCCTCGACGCGTTCCGGTGT----CGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AACGGACA-GTCGTGATGAGAGGCGGACCGAGACAACAT-----CATTGAATGCGGTATT-CGAGAACTGT-AGCTGACCTTTTT---CT-------TTCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACA----GGCACAAATAACA--TGAAAAA-CTCACATTGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGT-------------------CTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA---CGGAAAGAGAAGGAAAGAAAAAG- Neotyphodium_Fnj4603_copy1_FJ211213 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AATGAACA-GTCGTGATGAGAGGCGGACCGAGACAAAAAAAAA-TGATGATTGCGGTATT-CGAGAACTGT-AGCTGACCTTTTCCTTCC----------CCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACAG----GCACAAACAACACATGAAAAA-CTCACATTTCTTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAACGGTACCTCCGAGCTCCAGCTGGAGCGTATGAGCGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA---CGGAAAGAGAACGATAAAAAGTG- Neotyphodium_Fnj4603_copy2_FJ211214 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AACGGACA-GTCGTGATGAGAGGCGGACCGAGACAACAT-----CATTGAATGCGGTATT-CGAGAACTGT-AGCTGACCTTTTT---CT-------TTCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACA----GGCACAAATAACA--TGAAAAA-CTCACATTGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGT-------------------CTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA---CGGAAAGAGAAGGAAAGAAAAAG- Neotyphodium_Fnj4604_copy1_FJ211215 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AATGAACA-GTCGTGATGAGAGGCGGACCGAGACAAAAAAAAA-TGATGATTGCGGTATT-CGAGAACTGT-AGCTGACCTTTTCCTTCC----------CCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACAG----GCACAAACAACACATGAAAAA-CTCACATTTCTTTGGGCAGGGTAACCAAATCGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAACGGTACCTCCGAGCTCCAGCTGGAGCGTATGAGCGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA---CGGAAAGAGAACGATAAAAAGTG- Neotyphodium_Fnj4604_copy2_FJ211216 CCCCCTCCTCGACGCGTTCCGGTGT----CGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AACGGACA-GTCGTGATGAGAGGCGGACCGAGACAACAT-----CATTGAATGCGGTATT-CGAGAACTGT-AGCTGACCTTTTT---CT-------TTCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACA----GGCACAAATAACA--TGAAAAA-CTCACATTGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGT-------------------CTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA---CGGAAAGAGAAGGAAAGAAAAAG- Neotyphodium_Fnj6605_copy1_FJ211217 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AATGAACA-GTCGTGATGAGAGGCGGACCGAGACAAAAAAAAA-TGATGATTGCGGTATT-CGAGAACTGT-AGCTGACCTTTTCCTTCC----------CCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACAG----GCACAAACAACACATGAAAAA-CTCACATTTCTTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAACGGTACCTCCGAGCTCCAGCTGGAGCGTATGAGCGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA---CGGAAAGAGAACGATAAAAAGTG- Neotyphodium_Fnj6605_copy2_FJ211218 CCCCCTCCTCGACGCGTTCCGGTGT----CGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AACGGACA-GTCGTGATGAGAGGCGGACCGAGACAACAT-----CATTGAATGCGGTATT-CGAGAACTGT-AGCTGACCTTTTT---CT-------TTCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACA----GGCACAAATAACA--TGAAAAA-CTCACATTGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGT-------------------CTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA---CGGAAAGAGAAGGAAAGAAAAAG- Neotyphodium_Fnj6606_copy1_FJ211219 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AATGAACA-GTCGTGATGAGAGGCGGACCGAGACAAAAAAAAA-TGATGATTGCGGTATT-CGAGAACTGT-AGCTGACCTTTTCCTTCC----------CCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACAG----GCACAAACAACACATGAAAAA-CTCACATTTCTTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAACGGTACCTCCGAGCTCCAGCTGGAGCGTATGAGCGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA---CGGAAAGAGAACGATAAAAAGTG- Neotyphodium_Fnj6606_copy2_FJ211220 CCCCCTCCTCGACGCGTTCCGGTGT----CGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AACGGACA-GTCGTGATGAGAGGCGGACCGAGACAACAT-----CATTGAATGCGGTATT-CGAGAACTGT-AGCTGACCTTTTT---CT-------TTCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACA----GGCACAAATAACA--TGAAAAA-CTCACATTGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGT-------------------CTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA---CGGAAAGAGAAGGAAAGAAAAAG- Neotyphodium_Rnj6105_copy1_EU409310 CCCCCTCCTCGACGCGTTCCAGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AATGGACA-GTCGTGATGAGAGGCGGACCGAGACAAAAAAAAT-TAATGATTGCGGTATT-CGAGAACTGT-CGCTGACATTTTACTTCC----------CCTCTAGGTTCATCTTCAAACCGGTCGGTGCGTAAGTGTGACAAATCCGCCGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACATTTCATTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAACGGTACCTCCGAGCTCCAGCTGGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATTTA---AAGTCTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA---CGGAAAGAGAACGATGAAAAGTG- Neotyphodium_Rxy6106_copy1_EU409305 CCCCCTCCTCGACGCGTTCCAGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AATGGACA-GTCGTGATGAGAGGCGGACCGAGACAAAAAAAAT-TAATGATTGCGGTATT-CGAGAACTGT-CGCTGACATTTTACTTCC----------CCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTGTGACAAATCCGCCGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACATTTCATTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAACGGTACCTTCGAGCTCCAGCTGGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATTTA---AAGTCTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA---CGGAAAGAGAACGATGAAAAGTG- Neotyphodium_Rxy6106_copy2_EU409308 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AACGGACA-GTAGTGATGAGAGGCGGACCGAGACAACAT-----TAATGGATGCGGTATT-CGAAAACCGT-AGCTGACCTTTTTC---T-------TTCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACA----GGCACAAATAACA--TGAAAAA-CTCACATTGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGCATGAGTGTCTACTTCAACGAGGCAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTACATAC----CGCCCTGGAGATGGGA---CGGAAAAAGAAGGAAAGAAAAAG- Neotyphodium_aotearoae_AF323370 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGACCACGACGTGCACGCCC-------AACGGACA-GTCGTGATGAGAGGCGGACCGAGACAAAATG-----AATGAATGCGGTATT-CGAGAACTGT-AGCTGACCTTTTTTCTTT---------CCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACAG----ACACAAATAACA--TGAAAAA-CTCACATTTATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA---CGGAAAGAGAAGGAAAGAAAAAG- Neotyphodium_australiense_AF323379 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGAAGTGCACGCCC-------AACG{AG}ACA-GTCGTGATGAGAGGCGGACCGAGACAAAAT-----TAATGAATGCGGTATT-CGAGAACTGT-AGCTGACCTGTTTCTTCCCCTCTTTTCCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATTCGCCGACCTCGAACGACAG----GCACAAACAGCA--TGAAAAA-CTCACATTCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTACATACATACCGCCCCGGAGATGGGA---CGGAAAGAGAACGAAAGAAAAAG- Neotyphodium_australiense_AF323381 CCCCCTCCTCGACGCGTTCCGGTGT----{CT}GAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGA?GTGCACGCCC-------AACG{AG}ACA-GTCGTGATGAGAGGCGGACCGAGACAACAT-----CATTGAATGCGGTATT-CGAGAACTGT-AGCTGACCTTTTT---CT-------TTCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACA----GGCACAAATAACA--TGAAAAA-CTCACATTGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGT-------------------CTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA---CGGAAAGAGAAGGAAAGAAAAAG- Neotyphodium_chisosum_AF457470 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AACGAACA-GTCGTGATGAGAGGCGGACCGAGACAACAT-----TAACGAATGCGGTATT-CGAGAACTGT-AGCTGACCTGTTTCTTTCCCTCTTTTCCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACAGACAGGCACAAACAGCA--TGAAAAA-CTCACATTCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTTGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTACATACATACCGCCCCGGAGATGAGA---CGGAAAGAGAACGAGAGAAAAAG- Neotyphodium_chisosum_AF457471 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AATGGACA-GTCGTGATGAGAGGCGGACCGAGACAAAAAAAAT-TAATGATTGCGGTATT-CGAGAACTGT-AGCTGACATTTTACTTCC----------CCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACAG----GCACAAATAACA--TGAAAAA-CTCACATTTCTTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAACGGTACCTCCGAGCTCCAGCTGGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTACATAC----CGCCCTGGAGATTAGA---CGGAAAGAGAACGATGAAAAGTG- Neotyphodium_chisosum_AF457472 CCCCCTCCTCGACGCGTTCCGGTGT----CGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AACGGACA-GTCGTGATGAGAGGCGGACCGAGACAACAT-----CATTGAATGCGGTATT-CGAGA-CTGT-AGCTGACCTTTTTT--CT-------TTCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACA----GGCACAAATAACA--TGAAAAA-CTCACATTGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGT-------------------CTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA---CGGAAAGAGAAGGAAAGAAAAAG- Neotyphodium_coenophialum_L06951 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGAAGTGCACGCCC-------AACGAACA-GTCGTGATGAGAGGCGGACCGAGACAAAAT-----TAATGAATGCGGTATT-CGAGAACTGT-AGCTGACCTGTT-CTTCCCCTCTTTTCCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATTCGCCGACCTCGAACGACAG----GCACAAACAGCA--TGAAAAA-CTCACATTCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTACATACATACCGCCCCGGAGATGGGA---CGGAAAGAGAACGAAAGAAAAAG- Neotyphodium_coenophialum_L06964 CCCCCTCCTCGACGCGTTCCGGTGT----CGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AACGGACA-GTCGTGATGAGAGGCGGACCGAGACAACAT-----CATTGAATGCGGTATT-CGAGAACTGT-AGCTGACCTTTTT---CT-------TTCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCTGCCGACCTCGAACGACA----GGCACAAATAACA--TGAAAAA-CTCACATTGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGTAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGT-------------------CTCCATTGAGCTACATAC----CGCCCTGGAGATGGGA---CGGAAAAAGAAGGAAAGAAAAAG- Neotyphodium_coenophialum_X56847 CTCTCTCCTCGACGCGTTCCGGTGT----TGAGCCCCCCTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AACGAACA-GTCGTGATGAGAGGCGGATCGAGACAAAAT-----TAATGAATGCGGTATT-CGAGAACTGT-AGCTGACCTGTTTCTTTCCCTCTTTTCCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-GCCGACCTCGAACGACAG----GCACAAACAGCA--TGAAAAAACTCACATTCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCGTTGAGCTACATACATACCGCCCCGGAGATGAGA---CGGAAAGAGAACGAAAGAAAAAG- Neotyphodium_gansuense_EF422756 CCCCCTCATCGACGCGTTCCAGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGGGCC-----CGGCCACGACGTACACGCCCGCGGCCCAATGGACA-GTCGTGATGAGAGGCGGACCGAGACAGAAT-----TAATGATTGCGGTATT-CGAGAACTGT-AGCTGATCTTTTTTCTTT---------CCCTCTAGGTTCATCTTCAGACCGGTCAGTGCGTAAGTG--ACAAATTCGCCGACCTCGAACGACAG----GCACAAACAACA--TGAAAA--CTCACATTTATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTTTTCATAATCAA-AAA-GTCTCCATTGAGCTGCATAC----CGCTCTGGAGATAAGA---CGGAAAGAGAACGAAAAAAAAAA- Neotyphodium_gansuense_EF422757 CCCCCTCATCGACGCGTTCCAGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGGGCC-----CGGCCACGACGTACACGCCCGCGGCCCAATGGACA-GTCGTGATGAGAGGCGGACCGAGACAGAAT-----TAATGATTGCGGTATT-CGAGAACTGT-AGCTGATCTTTTTTCTTT---------CCCTCTAGGTTCATCTTCAGACCGGTCAGTGCGTAAGTG--ACAAATTCGCCGACCTCGAACGACAG----GCACAAACAACA--TGAAAA--CTCACATTTATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTTTTCATAATCAA-AAA-GTCTCCATTGAGCTGCATAC----CGCTCTGGAGATAAGA---CGGAAAGAGAACGAAAAAAAAAA- Neotyphodium_gansuense_inebrians_AF457494 CCCCCTCATCGACGCGTTCCAGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGGGCC-----CGGCCACGACGTACACGCCCGCGGCCCAATGGACA-ATCGTGATGAGAGGCGGACCGAGACAGAAT-----TAATGATTGCGGTATTTCGAGAACTGT-AGCTGATCCATTTTCTTT---------CCCTCTAGGTTCATCTTCAGACCGGTCAGTGCGTAAGTG--ACAAATTCGCCGACCTCGAACGACAG----GCAGAAACAACA--TGAAAA--CTCACATTTATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTTTTCATAATCAA-AAAAGTCTCCATTGAGCTGCATAC----CGCTCTGGAGATGAGA---CGGAAAGAGAACGAAAAAAAAAA- Neotyphodium_gansuense_inebrians_AF457495 CCCCCTCATCGACGCGTTCCAGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGGGCC-----CGGCCACGACGTACACGCCCGCGGCCCAATGGACA-ATCGTGATGAGAGGCGGACCGAGACAGAAT-----TAATGATTGCGGTATTTCGAGAACTGT-AGCTGATCCATTTTCTTT---------CCCTCTAGGTTCATCTTCAGACCGGTCAGTGCGTAAGTG--ACAAATTCGCCGACCTCGAACGACAG----GCAGAAACAACA--TGAAAA--CTCACATTTATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTTTTCATAATCAA-AAAAGTCTCCATTGAGCTGCATAC----CGCTCTGGAGATGAGA---CGGAAAGAGAACGAAAAAAAAAA- Neotyphodium_guerinii_EF422746 CCCCTCCCTCGACGCGTTCCAGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AACGGACAAGTCGTGATGAGAGGCGGACCGAGACAACAT-----TGATGAATGCGGTATT-CGAAAACCGT-AGCTGACCTTTTTT--CT-------TTGCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACA----GGCACAAATAACA--TGAAAAA-CTCACATTGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTA-TTCAACGAGGCAAGTCTTCATAATCTAAAAAAGTCTCCATTGAGCTACATAC----CGCCCTGGAGATGGGA---CGGGAAAAGAAGCGAAGAAAAAG- Neotyphodium_guerinii_EF422747 CCCCCTCATCGACGCGTTCCAGTGT----TAAGCCC--CTGATTTCGTACCCCGCCGGGCC-----CGACCACGACGTACACGCCCGCGGCCCAATGGACA-GTCTTGTTGAGAGGCGGACCGAGACAGAAT-----TAATGATTGCGGTATT-CGAGAACTGT-AGCTGATCTTTTTTCTTT---------CCCTCTAGGTTCATCTTCAGACCGGTCAGTGCGTAAGTG--ACAAATTCGCCGACCTCGAACGACAG----GCACAAACAACA--TGAAAA--CTCACATTTATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTTTTCATAATCAA-AAAAGTCTCCATTGAGCTGCATAC----CGCTCTGGAGATGAGA---CGGAAAGAGAACGAAAGATAAAA- Neotyphodium_guerinii_EF422754 CCCCTCCCTCGACGCGTTCCAGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AACGGACAAGTCGTGATGAGAGGCGGACCGAGACAACAT-----TGATGAATGCGGTATT-CGAAAACCGT-AGCTGACCTTTTTT--CT-------TTGCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACA----GGCACAAATAACA--TGAAAAA-CTCACATTGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTCTTCATAATCTAAAAAAGTCTCCATTGAGCTACATAC----CGCCCTGGAGATGGGA---CGGGAAAAGAAGCGAAGAAAAAG- Neotyphodium_guerinii_EF422755 CCCCCTCATCGACGCGTTCCAGTGT----TAAGCCC--CTGATTTCGTACCCCGCCGGGCC-----CGACCACGACGTACACGCCCGCGGCCCAATGGACA-GTCTTGTTGAGAGGCGGACCGAGACAGAAT-----TAATGATTGCGGTATT-CGAGAACTGT-AGCTGATCTTTTTTCTTT---------CCCTCTAGGTTCATCTTCAGACCGGTCAGTGCGTAAGTG--ACAAATTCGCCGACCTCGAACGACAG----GCACAAACAACA--TGAAAA--CTCACATTTATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTTTTCATAATCAA-AAAAGTCTCCATTGAGCTGCATAC----CGCTCTGGAGATGAGA---CGGAAAGAGAACGAAAGATAAAA- Neotyphodium_huerfanum_AF457493 CCCCCTCCTCGACGCGTTCCGGTGT----CGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AACGGACA-GTCGTGATGAGAGGCGGACCGAGACAACAT-----CATTGAATGCGGTATT-CGAGAGCTGT-AGCTGACCTTTTT---CT-------TTCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCTGCCGACCTCGAACGACA----GGCACAAATAACA--TGAAAAA-CTCACATTGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGT-------------------CTCCATTGAGCTACATAC----CGCCCTGGAGATGGGA---CGGAAAAAGAAGGAAAGAAAAAG- Neotyphodium_lolii_AY865628 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGAAGTGCACGCCC-------AACGAACA-GTCGTGATGAGAGGCGGACCGAGACAAAAT-----TAATGAATGCGGTATT-CGAGAACTGT-AGCTGACCTGTTTCTTTCCCTCTTTTCCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATTCGCCGACCTCGAACGACAG----GCACAAACAGCA--TGAAAAA-CTCACATTCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTACATACATACCGCCCCGGAGATGGGA---CGGAAAGAGAACGAAAGAAAAAG- Neotyphodium_lolii_AY865629 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAACC-----CGGCCACGACGTGCACGCCC-------AATGAACA-GTCGTGATGAGAGGCGGACCGAGACAAAAAAAA--TAATGATTGCTGTATT-CGAGAACTGT-AGCTGACCTTTTCCTTTT----------CTTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAGCGACAG----GCACAAACAACACATGAAAAA-CTCACATTTCTTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAACGGTACCTCCGAGCTCCAGCTGGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA---CGGAAAGAGATCGATAAAAAGTG- Neotyphodium_melicicola_AF323384 CCCCCTCCTCGACGCGTTCCGGTGT----{CT}GAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGAAGTGCACGCCC-------AACGAACA-GTCGTGATGAGAGGCGGACCGAGACAAAAT-----TAATGAATGCGGTATT-CGAGAACTGT-AGCTGACCTGTTTCTTTCCCTCTTTTCCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATTCGCCGACCTCGAACGACAG----GCACAAACAGCA--TGAAAAA-CTCACATTCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTACATACATACCGGCCCGGAGATGGGA---CGGAAAGAGAACGAAAGAAAAAG- Neotyphodium_melicicola_AF323386 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGACCACGACGTGCACGCCC-------AACGGACA-GTCGTGATGAGAGGCGGACCGAGACAAAATG-----AATGAATGCGGTATT-CGAGAACTGT-AGCTGACCTTTTTTCTTT---------CCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACAG----ACACAAATAACA--TGAAAAA-CTCACATTTATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA---CGGAAAGAGAAGGAAAGAAAAAG- Neotyphodium_occultans_AF176271 CCCTCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCCCCGAGCC-----CGGCCACGACGTGCACGCCC-------AACGAACA-GTCGTGATGAGAGGCGGATCGAGACAAAAT-----TAATGAATGCGGTATT-CGAGAACTGT-AGCTGACCTGTTTCTTTCCCTCTTTTCCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATC-GCCGACCTCGAACAACAG----GCACAAACAGCA--TGAAAAATCTCACATTCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCGTTGAGCTACATACATACCGCCCCGGAGATGAAA---CGGAAAGAGAACGAAAGAAAAAG- Neotyphodium_occultans_AF176275 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAACC-----CGGCCACGACGTGCACGCCC-------AATGAACA-GTCGTGATGAGAGGCGGACCGAGACAAAAAAAA--TAATGATTGCTGTATT-CGAGAACTGT-AGCTGACCTTTTCCTTTT----------CCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACAG----GCACAAACAACACATGAAAAA-CTCACATTTCTTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAACGGTACCTCCGAGCTCCAGCTGGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTACATAC----CGCCCTGGAGATGAGA---CGGAAAGAGATCGATAAAAAGTG- Neotyphodium_siegelii_AF308138 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AATGAACA-GTCGTGATGAGAGGCGGACCGAGACAAAAAAAAAATGATGATTGCGGTATT-CGAGAACTGT-AGCTGACCTTTTCCTTCC----------CCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCCGCCGACCTCGAACGACAG----GCACAAACAACACATGAAAAA-CTCACATTTCTTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGTCTCGACAGCAATGGTGTGTACAACGGTACCTCCGAGCTCCAGCTGGAGCGTATGAGCGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTACATAC----CGCCCTGCAGATGAGA---CGGAAAGAGAACGATAAAAAGTG- Neotyphodium_siegelii_AF308139 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGAAGTGCACGCCC-------AACGAACA-GTCGTGATGAGAGGCGGACCGAGACAAAAT-----TAATGAATGCGGTATT-CGAGAACTGT-AGCTGACCTGTTTCTTTCCCTCTTTTCCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATTCGCCGACCTCGAACGACAG----GCACAAACAGCA--TGAAAAA-CTCACATTCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTACATACATACCGCCCCGGAGATGGGA---CGGAAAGAGAACGAAAGAAAAAG- Neotyphodium_tembladerae_AF323389 CCCCCTCCTCGACGCGTTCCGGTGT----{CT}GAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AACG{AG}ACA-GTCGTGATGAGAGGCGGACCGAGACAA{AC}AT-----?ATTGAATGCGGTATT-CGAGAACTGT-AGCTGACCTGTTTCTTTCCCTCTTTTCCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATTCGCCGACCTCGAACGACAG----GCACAAACAGCA--TGAAAAA-CTCACATTCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTACATACATACCGCCCCGGAGATGGGA---CGGAAAGAGAACGAAAGAAAAAG- Neotyphodium_tembladerae_AF323390 CCCCCTCCTCGACGCGTTCCGGTGT----{CT}GAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AACG{AG}ACA-GTCGTGATGAGAGGCGGACCGAGACAACAT-----CATTGAATGCGGTATT-CGAGAGCTGT-AGCTGACCTTTTT---CT-------TTCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCTGCCGACCTCGAACGACA----GGCACAAATAACA--TGAAAAA-CTCACATTGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGTT------------------CTCCATTGAGCTACATAC----CGCCCTGGAGATGGGA---CGGAAAAAGAAGGAAAGAAAAAG- Neotyphodium_tembladerae_AF457496 CCCCCTCCTCGACGCGTTCCGGTGT----TGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGAAGTGCACGCCC-------AACGAACA-GTCGTGATGAGAGGCGGACCGAGACAAAAT-----TAATGAATGCGGTATT-CGAGAACTGT-AGCTGACCTGTTTCTTTCCCTCTTTTCCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATTCGCCGACCTCGAACGACAG----GCACAAACAGCA--TGAAAAA-CTCACATTCATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGTAAGTCTTCATAATCTA---AAGTCTCCATTGAGCTACATACATACCGCCCCGGAGATGGGA---CGGAAAGAGAACGAAAGAAAAAG- Neotyphodium_tembladerae_AF457497 CCCCCTCCTCGACGCGTTCCGGTGT----CGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AACGGACA-GTCGTGATGAGAGGCGGACCGAGACAACAT-----CATTGAATGCGGTATT-CGAGAGCTGT-AGCTGACCTTTTT---CT-------TTCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCTGCCGACCTCGAACGACA----GGCACAAATAACA--TGAAAAA-CTCACATTGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGT-------------------CTCCATTGAGCTACATAC----CGCCCTGGAGATGGGA---CGGAAAAAGAAGGAAAGAAAAAG- Neotyphodium_typhinum_canariense_AF176266 CCCCCTCCTCGACGCGTTCCGGTGT----CGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AACGGACA-GTCGTGATGAGAGGCGGACCGAGACAACAT-----CATTGAATGCGGTATT-CGAGAACTGT-AGCTGACCTTTTT---CT-------TTCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCTGCCGACCTCGAACGACA----GGCACAAATAACA--TGAAAAA-CTCACATTGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGCAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGT-------------------CTCCATTGAGCTACATAC----CGCCCTGAAGATGGGA---CGGAAAAAGAAGGAAAGAAAAAG- Neotyphodium_uncinatum_L06946 CCCCCTCCTCGACGCGTTCCGGTGT----CGAGCCC--CTGATTTCGTACCCCGCCGAGCC-----CGGCCACGACGTGCACGCCC-------AACGGACA-GTCGTGATGAGAGGCGGACCGAGACAACAT-----CATTGAATGCGGTATT-CGAGAACTGT-AGCTGACCTTTTT---CT-------TTCCCTCTAGGTTCATCTTCAAACCGGTCAGTGCGTAAGTG--ACAAATCTGCCGACCTCGAACGACA----GGCACAAATAACA--TGAAAAA-CTCACATTGATTTGGGCAGGGTAACCAAATTGGTGCTGCTTTCTGGCAGACCATCTCTGGCGAGCACGGCCTCGACAGTAATGGTGTGTACAATGGTACCTCCGAGCTCCAGCTCGAGCGTATGAGTGTCTACTTCAACGAGGCAAGT-------------------CTCCATTGAGCTACATAC----CGCCCTGGAGATGGGA---CGGAAAAAGAAGGAAAGAAAAAG- ; END; BEGIN CODONS; CODONPOSSET CodonPositions (CHARACTERS = 'tubB, Epichloe Neotyphodium') = N: 1-517; CODONPOSSET * CodonPositions (CHARACTERS = 'tubB, Epichloe Neotyphodium') = N: 1-517; END; BEGIN TREES; TITLE Tb10390; LINK TAXA = Taxa2; TRANSLATE 1 Epichloe_typhina_L78274, 2 Epichloe_typhina_L78284, 3 Epichloe_typhina_L78285, 4 Epichloe_typhina_L78288, 5 Epichloe_typhina_L78292, 6 Epichloe_yangzii_DQ134037, 7 Epichloe_yangzii_DQ134038, 8 Neotyphodium_Fnj4602_copy1_FJ211211, 9 Neotyphodium_Fnj4602_copy2_FJ211212, 10 Neotyphodium_Fnj4603_copy1_FJ211213, 11 Neotyphodium_Fnj4603_copy2_FJ211214, 12 Neotyphodium_Fnj4604_copy1_FJ211215, 13 Neotyphodium_Fnj4604_copy2_FJ211216, 14 Neotyphodium_Fnj6605_copy1_FJ211217, 15 Neotyphodium_Fnj6605_copy2_FJ211218, 16 Neotyphodium_Fnj6606_copy1_FJ211219, 17 Neotyphodium_Fnj6606_copy2_FJ211220, 18 Neotyphodium_aotearoae_AF323370, 19 Neotyphodium_australiense_AF323379, 20 Neotyphodium_australiense_AF323381, 21 Neotyphodium_chisosum_AF457470, 22 Neotyphodium_chisosum_AF457471, 23 Neotyphodium_chisosum_AF457472, 24 Neotyphodium_coenophialum_L06951, 25 Neotyphodium_coenophialum_L06964, 26 Neotyphodium_coenophialum_X56847, 27 Neotyphodium_gansuense_EF422756, 28 Neotyphodium_gansuense_EF422757, 29 Neotyphodium_gansuense_inebrians_AF457494, 30 Neotyphodium_gansuense_inebrians_AF457495, 31 Neotyphodium_guerinii_EF422746, 32 Neotyphodium_guerinii_EF422747, 33 Neotyphodium_guerinii_EF422754, 34 Neotyphodium_guerinii_EF422755, 35 Neotyphodium_huerfanum_AF457493, 36 Neotyphodium_lolii_AY865628, 37 Neotyphodium_lolii_AY865629, 38 Neotyphodium_melicicola_AF323384, 39 Neotyphodium_melicicola_AF323386, 40 Neotyphodium_occultans_AF176271, 41 Neotyphodium_occultans_AF176275, 42 Neotyphodium_siegelii_AF308138, 43 Neotyphodium_siegelii_AF308139, 44 Neotyphodium_tembladerae_AF323389, 45 Neotyphodium_tembladerae_AF323390, 46 Neotyphodium_tembladerae_AF457496, 47 Neotyphodium_tembladerae_AF457497, 48 Neotyphodium_typhinum_canariense_AF176266, 49 Neotyphodium_uncinatum_L06946, 50 Neotyphodium_Rnj6105_copy1_EU409310, 51 Neotyphodium_Rxy6106_copy1_EU409305, 52 Neotyphodium_Rxy6106_copy2_EU409308, 53 Epichloe_amarillans_AF062426, 54 Epichloe_amarillans_AF457466, 55 Epichloe_baconii_AF250733, 56 Epichloe_baconii_L06961, 57 Epichloe_baconii_L78270, 58 Epichloe_brachyelytri_AF250736, 59 Epichloe_brachyelytri_L78271, 60 Epichloe_bromicola_AY033382, 61 Epichloe_bromicola_AY033383, 62 Epichloe_clarkii_AF250738, 63 Epichloe_clarkii_L78281, 64 Epichloe_elymi_AF062428, 65 Epichloe_elymi_AF457468, 66 Epichloe_festucae_L06955, 67 Epichloe_festucae_L78286, 68 Epichloe_glyceriae_L78275, 69 Epichloe_glyceriae_L78276, 70 Epichloe_sylvatica_L78278, 71 Epichloe_sylvatica_L78291, 72 Epichloe_typhina_AF062429; TREE Fig._2_tubB = [&R] (((((((((((((6,7),8),10),42),12),16),14),(60,61)),(22,(51,50))),(37,41)),(65,64)),((68,69),((34,32),((27,28),(29,30))))),(((53,54),21),((((56,55),(26,40)),57),(24,(36,(67,(44,(66,(43,(46,(38,19)))))))))),((59,58),((18,39),(((((((((63,62),33),31),4),1),3),((52,70),(5,71))),(35,(72,(45,((47,48),(49,25)))))),(20,(11,(15,(9,(13,(2,(23,17))))))))))); END; BEGIN TREES; TITLE Tb10389; LINK TAXA = Taxa1; TRANSLATE 1 Epichloe_amarillans_AF457504, 2 Epichloe_amarillans_AF457505, 3 Epichloe_baconii_AF231193, 4 Epichloe_baconii_AF231195, 5 Epichloe_baconii_AF231196, 6 Epichloe_brachyelytri_AF231197, 7 Epichloe_brachyelytri_AF231201, 8 Epichloe_bromicola_AY033356, 9 Epichloe_bromicola_AY033357, 10 Epichloe_clarkii_AF231206, 11 Epichloe_clarkii_AF231207, 12 Epichloe_elymi_AF457498, 13 Epichloe_elymi_AF457502, 14 Epichloe_festucae_AF231210, 15 Epichloe_festucae_AF231212, 16 Epichloe_glyceriae_AF231216, 17 Epichloe_glyceriae_AF231217, 18 Epichloe_sylvatica_AF231218, 19 Epichloe_sylvatica_AF231219, 20 Epichloe_typhina_AF231222, 21 Epichloe_typhina_AF231223, 22 Epichloe_typhina_AF231225, 23 Epichloe_typhina_AF231228, 24 Epichloe_typhina_AF231229, 25 Epichloe_typhina_AF231231, 26 Epichloe_yangzii_DQ134031, 27 Epichloe_yangzii_DQ134032, 28 Neotyphodium_Fnj4602_copy1_FJ211201, 29 Neotyphodium_Fnj4602_copy2_FJ211202, 30 Neotyphodium_Fnj4603_copy1_FJ211203, 31 Neotyphodium_Fnj4603_copy2_FJ211204, 32 Neotyphodium_Fnj4604_copy1_FJ211205, 33 Neotyphodium_Fnj4604_copy2_FJ211206, 34 Neotyphodium_Fnj6605_copy1_FJ211207, 35 Neotyphodium_Fnj6605_copy2_FJ211208, 36 Neotyphodium_Fnj6606_copy1_FJ211209, 37 Neotyphodium_Fnj6606_copy2_FJ211210, 38 Neotyphodium_aotearoae_AF323391, 39 Neotyphodium_australiense_AF323400, 40 Neotyphodium_australiense_AF323402, 41 Neotyphodium_chisosum_AF457508, 42 Neotyphodium_chisosum_AF457509, 43 Neotyphodium_chisosum_AF457510, 44 Neotyphodium_coenophialum_AF457511, 45 Neotyphodium_coenophialum_AF457512, 46 Neotyphodium_gansuense_inebrians_AF457538, 47 Neotyphodium_gansuense_inebrians_AF457539, 48 Neotyphodium_huerfanum_AF457537, 49 Neotyphodium_lolii_AF457540, 50 Neotyphodium_melicicola_AF323406, 51 Neotyphodium_occultans_AF457541, 52 Neotyphodium_occultans_AF457542, 53 Neotyphodium_siegelii_AF308132, 54 Neotyphodium_siegelii_AF308133, 55 Neotyphodium_tembladerae_AF323407, 56 Neotyphodium_tembladerae_AF323408, 57 Neotyphodium_tembladerae_AF457544, 58 Neotyphodium_tembladerae_AF457545, 59 Neotyphodium_typhinum_canariense_AF457543, 60 Neotyphodium_uncinatum_AF308131, 61 Neotyphodium_Rnj6105_copy1_EU409300, 62 Neotyphodium_Rnj6105_copy2_FJ189477, 63 Neotyphodium_Rxy6106_copy1_EU409302, 64 Neotyphodium_Rxy6106_copy2_FJ189478; TREE Fig._2_tefA = [&R] (((((((((28,30),32),34),36),(9,(52,42))),((27,26),((53,60),(8,(61,63))))),(12,13)),(7,6)),(17,16),((46,47),((5,(((((2,1),41),(3,4)),(45,51)),(58,(49,(14,((39,54),(55,(15,44)))))))),((50,38),(((((22,20),23),(10,11)),(21,(19,18))),(((((57,56),24),48),59),(35,(62,(40,(31,(33,(29,(25,(43,(37,64))))))))))))))); END;