#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 24, 2024; 21:41 GMT

TreeBASE (cc) 1994-2008

Study reference:
Fan P., Liu Y., Zhang Z., Zhao C., Li C., Liu W., & Li M. 2016. Phylogenetic position
of the white-cheeked macaque (Macaca leucogenys), a newly described primate
from Southeastern Tibet. Molecular Phylogentics and Evolution, .

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S19712]

BEGIN TAXA;
        TITLE  Untitled_Block_of_Taxa;
        DIMENSIONS NTAX=33;
        TAXLABELS
            Macaca_arctoides_1
            Macaca_arctoides_2
            Macaca_arctoides_3
            Macaca_assamenses_1
            Macaca_fascicularis_1
            Macaca_fascicularis_2
            Macaca_fascicularis_3
            Macaca_fuscata_1
            Macaca_fuscata_2
            Macaca_leucogenys_1
            Macaca_leucogenys_2
            Macaca_leucogenys_3
            Macaca_mulatta_1
            Macaca_mulatta_2
            Macaca_mulatta_3
            Macaca_mulatta_4
            Macaca_munzala_1
            Macaca_munzala_2
            Macaca_munzala_3
            Macaca_nemestrina_1
            Macaca_nemestrina_2
            Macaca_nigra_1
            Macaca_radiata_1
            Macaca_radiata_2
            Macaca_silenus_1
            Macaca_silenus_2
            Macaca_sylvanus_1
            Macaca_sylvanus_2
            Macaca_thibetana_1
            Macaca_thibetana_2
            Macaca_tonkeana_1
            Macaca_tonkeana_2
            Papio_hamadryas
            ;
END;

BEGIN TREES;
      TITLE Macaque_CYTB_DLOOP_TSPY_divtime_estimation;
      LINK TAXA = Untitled_Block_of_Taxa;
      TREE TREE1 = [&R] ((Papio_hamadryas:5.41105347930405,(Macaca_sylvanus_1:0.09793523118176228,Macaca_sylvanus_2:0.09793523118176228):5.313118248122289):2.4826677407879014,(((Macaca_arctoides_3:0.8471630984749003,(Macaca_arctoides_1:0.1450764003942453,Macaca_arctoides_2:0.1450764003942453):0.702086698080655):3.7571582736964,((Macaca_leucogenys_1:0.16599344916106418,(Macaca_leucogenys_2:0.03541320839819573,Macaca_leucogenys_3:0.03541320839819484):0.1305802407628751):2.3449435153434997,((Macaca_assamenses_1:1.1656552748830507,(Macaca_thibetana_1:0.22812913624366615,Macaca_thibetana_2:0.22812913624366615):0.9375261386393992):1.0278701846589948,((Macaca_radiata_1:0.22240504328292054,Macaca_radiata_2:0.22240504328292054):1.1959251971994984,(Macaca_munzala_3:0.4029567786206911,(Macaca_munzala_1:0.1589130455599541,Macaca_munzala_2:0.15891304555995456):0.24404373306074545):1.0153734618617296):0.7751952190596452):0.3174115049625055):2.0933844076667505):1.6275768817237042,(((Macaca_nemestrina_1:0.03878923792051969,Macaca_nemestrina_2:0.03878923792051969):4.305361706410281,((Macaca_silenus_1:0.038083380241007436,Macaca_silenus_2:0.038083380241007436):3.3990937268916195,(Macaca_nigra_1:1.7441348049744994,(Macaca_tonkeana_1:0.034229243649219754,Macaca_tonkeana_2:0.034229243649219754):1.7099055613252983):1.6930423021581267):0.906973837198175):1.1840536201527092,((Macaca_fuscata_1:0.1673949924964253,Macaca_fuscata_2:0.1673949924964253):2.3659673119264593,((Macaca_fascicularis_1:0.9904932829846507,(Macaca_fascicularis_2:0.2004051404749987,Macaca_fascicularis_3:0.2004051404749987):0.7900881425096529):0.9062262121291007,(Macaca_mulatta_3:1.3260706288441892,(Macaca_mulatta_2:0.23381570677966845,(Macaca_mulatta_1:0.07448507754095868,Macaca_mulatta_4:0.07448507754095868):0.15933062923871066):1.0922549220645394):0.5706488662695621):0.6366428093091341):2.994842260060625):0.7036936894114953):1.6618229661969464);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr100262]


END;