#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 19, 2024; 0:32 GMT

TreeBASE (cc) 1994-2008

Study reference:
Ishengoma E., & Agaba M. 2017. Evolution of Toll-like receptors in the context of
terrestrial ungulates and cetaceans diversification. BMC Evolutionary Biology,
.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S20429]

BEGIN TAXA;
        TITLE  Taxa;
        DIMENSIONS NTAX=19;
        TAXLABELS
            Balaenoptera_acutorostrata
            Bos_taurus
            Bubalus_bubalis
            Camelus_bactrianus
            Camelus_dromedarius
            Camelus_ferus
            Capra_hircus
            Ceratotherium_simum
            Equus_caballus
            Equus_przewalskii
            Giraffa_camelopardalis
            Lipotes_vexillifer
            Okapia_johnstonii
            Orcinus_orca
            Ovis_aries
            Pantholops_hodgsonii
            Physeter_catodon
            Sus_scrofa
            Tursiops_truncatus
            ;
END;

BEGIN TREES;
      TITLE 'Toll-like receptors in ungulates and cetaceans TLR3';
      LINK TAXA = Taxa;
      TREE Figure_3 = [&R] (Equus_przewalskii:1.0E-8,Equus_caballus:1.0E-8,(Ceratotherium_simum:0.03468113,((Camelus_dromedarius:2.5507E-4,(Camelus_bactrianus:1.0E-8,Camelus_ferus:1.0E-8):0.00159854):0.05371029,(Sus_scrofa:0.05326245,(((Okapia_johnstonii:0.00945325,Giraffa_camelopardalis:0.00728105):0.01311017,((Pantholops_hodgsonii:0.01179796,(Capra_hircus:0.00640266,Ovis_aries:0.00406741):0.00756203):0.00790241,(Bos_taurus:0.00893916,Bubalus_bubalis:0.00765262):0.00739973):0.0047861):0.05419768,(Balaenoptera_acutorostrata:0.00934662,(Physeter_catodon:0.01450463,(Lipotes_vexillifer:0.00996138,(Tursiops_truncatus:0.00226406,Orcinus_orca:0.00262802):0.00807986):0.00213485):0.00152039):0.01932048):0.01148217):0.00673682):0.02949795):0.04713668);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr101469]


END;