#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 17, 2024; 3:10 GMT

TreeBASE (cc) 1994-2008

Study reference:
Malysheva V.F., & Spirin V. 2017. Taxonomy and phylogeny of the Auriculariales (Agaricomycetes,
Basidiomycota) with stereoid basidiocarps. Fungal Biology, .

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S20134]

BEGIN TAXA;
        TITLE  Untitled_Block_of_Taxa;
        DIMENSIONS NTAX=68;
        TAXLABELS
            'Amphistereum leveilleanum Lentz_FP-106715'
            'Amphistereum schrenkii Burdsall_8476'
            Aporpium_hexagonoides_ML297
            'Auricularia mesenterica FO_25132'
            Auricularia_mesenterica_TUFC12805
            Auricularia_polytricha_TUFC12920
            'Basidiodendron caesiocinereum var._caesiocinereum_MW_320'
            'Basidiodendron eyrei MW_529'
            Basidiodendron_eyrei_TUFC14484
            'Bourdotia galzinii FO_2278'
            'Ductifera pululahuana KW_1733'
            'Eichleriella alliciens Burdsall_7194'
            'Eichleriella bactriana TAAM_104431'
            'Eichleriella bactriana TAAM_55071'
            'Eichleriella bactriana TAAM_96698'
            'Eichleriella crocata TAAM_101077'
            'Eichleriella crocata TAAM_125909'
            'Eichleriella desertorum Ryvarden_49350'
            'Eichleriella flavida Ryvarden_49412'
            'Eichleriella leucophaea LE_303261'
            'Eichleriella leucophaea Larsson_15277'
            'Eichleriella leucophaea Larsson_15299'
            'Eichleriella macrospora Nakasone FP-101769'
            'Eichleriella sicca Miettinen_17349'
            'Eichleriella tenuicula Ryvarden_17599'
            Elmerina_caryae_WD2207
            'Elmerina foliacea Yuan_5691'
            Elmerina_hispida_E701
            Elmerina_hispida_WD548
            'Exidia glandulosa MW_355'
            Exidia_glandulosa_TUFC34008
            'Exidia pithya MW_313'
            'Exidiopsis calcea MW_331'
            'Exidiopsis effusa Miettinen_19136'
            'Exidiopsis grisea RoKi_162'
            Exidiopsis_grisea_TUFC100049
            Exidiopsis_sp._FO_46291
            Exidiopsis_sp._TUFC34333
            Heterochaete_andina_TYPE
            Heterochaete_delicata_TUFC33717
            'Heterochaete hirneoloides USJ_55480'
            'Heterochaete shearii USJ_54609'
            Heterochaete_sp._USJ_55639
            'Heterochaetella brachyspora RoKi_96'
            'Heteroradulum adnatum Ryvarden_23453'
            'Heteroradulum deglubens FO_12006'
            'Heteroradulum deglubens LE_225523'
            'Heteroradulum deglubens LE_38182'
            'Heteroradulum deglubens Solheim_1864'
            'Heteroradulum deglubens TAAM_064782'
            'Heteroradulum kmetii CWU_6152'
            'Heteroradulum kmetii DAOM_145605'
            'Heteroradulum kmetii LE_303456'
            'Heteroradulum kmetii OF-295640'
            'Heteroradulum kmetii Spirin_6466'
            'Heteroradulum semis Miettinen_10618.1'
            'Myxarium grilletii RoKi_218'
            'Myxarium nucleatum ZP_TRE2M'
            'Protodontia subgelatinosa USJ_54661'
            'Protomerulius africanus Ryv._9800'
            'Pseudohydnum gelatinosum MW_298'
            Radulum_kmetii_TYPE
            'Sclerotrema griseobrunneum Niemela_2722'
            'Sclerotrema griseobrunneum Spirin_7674'
            'Sistotrema brinkmannii Isolate_236'
            'Tremellochaete japonica LE_303446'
            Tremellodendropsis_sp._USJ_54427
            'Tremiscus helvelloides MW_337'
            ;
END;

BEGIN TREES;
      TITLE Auriculariales_ITS_LSU;
      LINK TAXA = Untitled_Block_of_Taxa;
      TREE tree_1 = [&R] ('Sistotrema brinkmannii Isolate_236':0.508717435,('Protodontia subgelatinosa USJ_54661':0.42601117,(('Tremiscus helvelloides MW_337':0.13879067,(('Bourdotia galzinii FO_2278':0.10562503,'Ductifera pululahuana KW_1733':0.15204364):0.09242797,('Basidiodendron caesiocinereum var._caesiocinereum_MW_320':0.15755191,(Basidiodendron_eyrei_TUFC14484:0.26956104,'Basidiodendron eyrei MW_529':0.0801666):0.18881785):0.21592144):0.11706318):0.03715797,(('Pseudohydnum gelatinosum MW_298':0.1536642,(('Myxarium grilletii RoKi_218':0.03015157,'Myxarium nucleatum ZP_TRE2M':0.12489223):0.54127131,('Heterochaetella brachyspora RoKi_96':0.04880631,('Protomerulius africanus Ryv._9800':0.01786731,Tremellodendropsis_sp._USJ_54427:0.06699834):0.161022):0.0263592):0.05654957):0.02188138,('Heterochaete hirneoloides USJ_55480':0.04795997,((((Auricularia_polytricha_TUFC12920:0.0592273,(Auricularia_mesenterica_TUFC12805:0.00550622,'Auricularia mesenterica FO_25132':1.0E-8):0.02170318):0.0281585,((Elmerina_caryae_WD2207:0.05703671,Aporpium_hexagonoides_ML297:0.10174997):0.03310807,(Elmerina_hispida_E701:0.02048625,(Elmerina_hispida_WD548:0.02277828,'Elmerina foliacea Yuan_5691':0.04850631):0.00818659):0.21900724):0.0248751):0.00983169,(('Amphistereum leveilleanum Lentz_FP-106715':0.04939714,'Amphistereum schrenkii Burdsall_8476':0.02523534):0.03077361,('Eichleriella alliciens Burdsall_7194':0.02375568,('Eichleriella desertorum Ryvarden_49350':0.05926522,(('Eichleriella leucophaea Larsson_15277':0.01425696,('Eichleriella leucophaea Larsson_15299':0.01613909,('Eichleriella leucophaea LE_303261':0.01599319,('Eichleriella bactriana TAAM_104431':0.00190291,('Eichleriella bactriana TAAM_55071':1.0E-7,'Eichleriella bactriana TAAM_96698':9.0E-8):2.1E-7):0.00400251):0.0012234):0.00403911):0.00422951,(('Eichleriella crocata TAAM_101077':1.0E-8,'Eichleriella crocata TAAM_125909':1.0E-7):0.01914923,((Heterochaete_delicata_TUFC33717:0.00946485,'Eichleriella tenuicula Ryvarden_17599':0.01675206):0.00774728,('Eichleriella flavida Ryvarden_49412':0.00447528,('Heterochaete shearii USJ_54609':0.01045731,('Eichleriella sicca Miettinen_17349':0.00587801,'Eichleriella macrospora Nakasone FP-101769':0.0134012):0.00294752):0.00229315):0.02065389):0.01807881):0.00389861):0.00313567):0.00342197):0.01969025):0.01260519):0.0068238,(Exidiopsis_sp._FO_46291:0.03163288,(('Exidia pithya MW_313':0.0376274,(Exidia_glandulosa_TUFC34008:0.00226135,'Exidia glandulosa MW_355':0.0095069):0.01939441):0.02977166,(('Sclerotrema griseobrunneum Spirin_7674':0.00541015,'Sclerotrema griseobrunneum Niemela_2722':0.00422386):0.03352728,('Exidiopsis grisea RoKi_162':0.04989619,(('Exidiopsis effusa Miettinen_19136':5.9E-7,Heterochaete_andina_TYPE:0.10956318):0.0383381,('Tremellochaete japonica LE_303446':0.02555196,(('Exidiopsis calcea MW_331':0.03069325,(Exidiopsis_sp._TUFC34333:0.02556353,Exidiopsis_grisea_TUFC100049:0.02129601):0.03070663):0.03013105,('Heteroradulum adnatum Ryvarden_23453':0.01511684,((Heterochaete_sp._USJ_55639:0.01881696,'Heteroradulum semis Miettinen_10618.1':0.06971353):2.4E-7,(('Heteroradulum deglubens Solheim_1864':7.0E-8,('Heteroradulum deglubens LE_38182':1.2E-7,('Heteroradulum deglubens TAAM_064782':0.00189347,('Heteroradulum deglubens LE_225523':0.00795393,'Heteroradulum deglubens FO_12006':0.00387162):0.00185936):1.2E-7):1.2E-7):0.00910006,('Heteroradulum kmetii OF-295640':0.00198095,(('Heteroradulum kmetii CWU_6152':7.0E-8,'Heteroradulum kmetii DAOM_145605':1.0E-8):7.0E-8,('Heteroradulum kmetii LE_303456':1.0E-8,('Heteroradulum kmetii Spirin_6466':1.0E-8,Radulum_kmetii_TYPE:0.0019135):1.0E-8):0.00378693):0.00271049):0.01037705):0.01215131):0.00680323):0.01946835):0.01306059):0.00778786):0.01213257):0.00795519):0.00959955):0.00337678):0.00431902):0.01503862):0.08437217):0.02009559):0.05788647):0.508717435);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr101534]


END;