#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on June 03, 2024; 15:25 GMT

TreeBASE (cc) 1994-2008

Study reference:
Pordel A., Khodaparast S., Mckenzie E., & Javan-nikkhah M. 2017. Two new species
of Pseudopyricularia from Iran. Mycological Progress, 16(7): 729-736.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S20503]

BEGIN TAXA;
        TITLE  Taxa;
        DIMENSIONS NTAX=46;
        TAXLABELS
            'Bambusicularia brunnea CBS_133599'
            'Bambusicularia brunnea CBS_133600'
            'Barretomyces calatheae CBS_129274'
            'Buergenerula spartinae ATCC_22848'
            'Bussabanomyces longisporus CBS_125232'
            Cryphonectria_parasitica_EP155
            'Deightoniella roumeguerei CBS_128780'
            'Magnaporthiopsis poae ATCC_64411'
            Magnaporthiopsis_poae_M47
            Magnaporthiopsis_rhizophila_M23
            'Nakataea oryzae ATCC_44754'
            'Nakataea oryzae CBS_202_47'
            'Nakataea oryzae CBS_243_76'
            'Nakataea oryzae CBS_252_34'
            'Nakataea oryzae CBS_253_34'
            'Neopyricularia commelinicola CBS_128303'
            'Neopyricularia commelinicola CBS_128306'
            'Neopyricularia commelinicola CBS_128308'
            'Proxipyricularia zingiberis CBS_132195'
            'Proxipyricularia zingiberis CBS_132355'
            'Proxipyricularia zingiberis CBS_133594'
            'Proxipyricularia zingiberis CBS_303_39'
            'Pseudopyricularia cyperi CBS_133595'
            'Pseudopyricularia cyperi CBS_665_79'
            'Pseudopyricularia higginsii CBS_121934'
            Pseudopyricularia_hyrcaniana_ck1
            Pseudopyricularia_hyrcaniana_ck2
            Pseudopyricularia_hyrcaniana_ck3
            Pseudopyricularia_javanii_17d1
            Pseudopyricularia_javanii_18d
            'Pseudopyricularia kyllingae CBS_133597'
            Pseudopyricularia_kyllingae_PH0054
            Pyricularia_grisea_BR0029
            Pyricularia_grisea_CR0024
            'Pyricularia oryzae CBS_255_38'
            'Pyricularia oryzae CBS_433_70'
            'Pyricularia oryzae CBS_657_66'
            'Pyricularia oryzae CBS_658_66'
            'Pyricularia oryzae CBS_659_66'
            Pyricularia_penniseticola_BF0017
            Pyricularia_pennisetigena_BR0067
            'Pyricularia pennisetigena CBS_133596'
            'Pyricularia sp CBS_133598'
            Pyricularia_zingibericola_RN0001
            'Slopeiomyces cylindrosporus CBS_609_75'
            'Slopeiomyces cylindrosporus CBS_610_75'
            ;
END;

BEGIN TREES;
      TITLE Pseudopyricularia_LSU_rpb1_NJ;
      LINK TAXA = Taxa;
      TREE PAUP_1 = [&R] (Cryphonectria_parasitica_EP155:0.4172545,(('Bussabanomyces longisporus CBS_125232':0.098978,(('Slopeiomyces cylindrosporus CBS_609_75':0.0,'Slopeiomyces cylindrosporus CBS_610_75':0.0):0.044211,((Magnaporthiopsis_rhizophila_M23:0.003291,('Magnaporthiopsis poae ATCC_64411':0.0,Magnaporthiopsis_poae_M47:0.0):2.44627E-6):0.048691,('Buergenerula spartinae ATCC_22848':0.044105,('Nakataea oryzae CBS_253_34':0.0,('Nakataea oryzae CBS_252_34':0.0,('Nakataea oryzae CBS_243_76':0.0,('Nakataea oryzae ATCC_44754':0.0,'Nakataea oryzae CBS_202_47':0.0):0.0):0.0):0.0):0.042816):0.003475):0.05643):0.052796):0.018394,('Barretomyces calatheae CBS_129274':0.092171,(('Deightoniella roumeguerei CBS_128780':0.060988,((('Pseudopyricularia kyllingae CBS_133597':0.0,Pseudopyricularia_kyllingae_PH0054:0.0):0.044245,(Pseudopyricularia_javanii_17d1:0.0,Pseudopyricularia_javanii_18d:0.0):0.031984):0.014067,(('Pseudopyricularia cyperi CBS_133595':0.0,'Pseudopyricularia cyperi CBS_665_79':0.0):0.03541,('Pseudopyricularia higginsii CBS_121934':0.037671,(Pseudopyricularia_hyrcaniana_ck1:0.0,(Pseudopyricularia_hyrcaniana_ck2:8.36E-4,Pseudopyricularia_hyrcaniana_ck3:0.0):0.001678):0.016992):0.018144):0.005037):0.034336):0.006686,(('Bambusicularia brunnea CBS_133600':0.002491,'Bambusicularia brunnea CBS_133599':0.001772):0.062237,((('Neopyricularia commelinicola CBS_128308':0.0,('Neopyricularia commelinicola CBS_128303':0.0,'Neopyricularia commelinicola CBS_128306':0.0):0.0):0.052147,('Proxipyricularia zingiberis CBS_133594':8.44E-4,('Proxipyricularia zingiberis CBS_303_39':0.0,('Proxipyricularia zingiberis CBS_132195':0.0,'Proxipyricularia zingiberis CBS_132355':0.0):0.0):8.44E-4):0.036258):0.010899,((Pyricularia_pennisetigena_BR0067:0.0,'Pyricularia pennisetigena CBS_133596':8.36E-4):0.023683,((Pyricularia_penniseticola_BF0017:0.007038,(Pyricularia_grisea_BR0029:0.0,Pyricularia_grisea_CR0024:8.34E-4):0.015113):0.008775,(('Pyricularia sp CBS_133598':0.010765,Pyricularia_zingibericola_RN0001:0.016102):0.008879,('Pyricularia oryzae CBS_658_66':7.99E-4,('Pyricularia oryzae CBS_255_38':0.0,('Pyricularia oryzae CBS_657_66':0.0,('Pyricularia oryzae CBS_433_70':8.4E-4,'Pyricularia oryzae CBS_659_66':0.0):0.0):0.0):0.001731):0.011484):0.003335):0.002523):0.038267):0.009325):0.001658):0.012196):0.162284):0.4172545);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr107021]


END;