#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on April 16, 2024; 13:13 GMT

TreeBASE (cc) 1994-2008

Study reference:
Kuo L., Ebihara A., Kato M., Rouhan G., Ranker T., & Wang C. 2017. Morphological
characterization of infra-generic lineages in Deparia (Athyriaceae; Polypodiales).
Cladistics, .

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S20277]

BEGIN TAXA;
        TITLE  Taxa;
        DIMENSIONS NTAX=72;
        TAXLABELS
            Athyrium_atkinsonii
            Athyrium_filixfemina
            Athyrium_niponicum
            Athyrium_otophorum
            Athyrium_skinneri
            Cornopteris_opaca
            Deparia_acrostichoides
            Deparia_acuta
            Deparia_aff._glabrata
            Deparia_aff._jiulungensis
            Deparia_auriculata
            Deparia_biserialis
            Deparia_bonincola
            Deparia_boryana
            Deparia_cataracticola
            Deparia_concinna
            Deparia_confluens
            Deparia_conilii
            Deparia_coreana
            Deparia_dickasonii
            Deparia_dimorphophylla
            Deparia_dolosa
            Deparia_edentula
            Deparia_emeiensis
            Deparia_erecta
            Deparia_fenzliana
            Deparia_formosana
            Deparia_forsythiimajoris
            Deparia_glabrata
            Deparia_gordonii
            Deparia_hainanensis
            Deparia_henryi
            Deparia_heterophlebia
            Deparia_japonica
            Deparia_jiulungensis
            Deparia_kaalaana
            Deparia_kiusiana
            Deparia_lancea
            Deparia_lobatocreneta
            Deparia_longipes
            Deparia_macdonellii
            Deparia_marginalis
            Deparia_medogensis
            Deparia_minamitanii
            Deparia_okuboana
            Deparia_omeiensis
            Deparia_otomasui
            Deparia_parvisora
            Deparia_petersenii_deflexa
            Deparia_petersenii_petersenii_var._petersenii
            Deparia_petersenii_petersenii_var._yakusimensis
            Deparia_prolifera
            Deparia_pseudoconilii
            Deparia_pterorachis
            Deparia_pycnosora
            Deparia_sichuanensis
            Deparia_sp.
            Deparia_subfluvialis
            Deparia_tenuifolia
            Deparia_timetensis
            Deparia_tomitaroana
            Deparia_unifurcata
            Deparia_viridifrons
            Deparia_wilsonii
            Deparia_yunnanensis
            Diplazium_bombonasae
            Diplazium_dilatatum
            Diplazium_proliferum
            Diplazium_squamigerum
            Diplazium_wichurae
            Matteuccia_struthiopteris
            Woodwardia_japonica
            ;
END;

BEGIN TREES;
      TITLE 'Deparia 4-pDNA bestREP1';
      LINK TAXA = Taxa;
      TREE bestREP1 = [&R] ((((Diplazium_wichurae:36.314499,Diplazium_bombonasae:36.314499):11.813685,(Diplazium_squamigerum:44.800546,(Diplazium_proliferum:28.475298,Diplazium_dilatatum:28.475298):16.325248):3.327638):29.172474,((Athyrium_niponicum:37.95165,Athyrium_skinneri:37.95165):17.237696,(Cornopteris_opaca:48.350521,(Athyrium_filixfemina:22.358737,(Athyrium_atkinsonii:19.165381,Athyrium_otophorum:19.165381):3.193356):25.991784):6.838825):22.111312):6.019342,((Deparia_pterorachis:18.845286,((Deparia_viridifrons:0.263074,(Deparia_okuboana:0.263074,(Deparia_henryi:0.263074,Deparia_coreana:0.263074):1.0E-8):1.0E-8):11.814895,((Deparia_unifurcata:1.0E-8,Deparia_gordonii:1.0E-8):8.863364,((Deparia_edentula:3.214196,Deparia_subfluvialis:3.214196):4.923441,(Deparia_aff._glabrata:3.241208,(Deparia_boryana:3.241208,(Deparia_glabrata:3.241208,(Deparia_sp.:0.935475,(Deparia_forsythiimajoris:0.357669,Deparia_parvisora:0.357669):0.577806):2.305733):1.0E-8):1.0E-8):4.896429):0.725727):3.214605):6.767317):8.834714,(((Deparia_acrostichoides:8.211672,(Deparia_aff._jiulungensis:5.503383,Deparia_pycnosora:5.503383):2.708288):3.957945,(Deparia_dolosa:3.359978,((Deparia_jiulungensis:0.47403,Deparia_acuta:0.47403):2.885948,((Deparia_emeiensis:3.359978,(Deparia_macdonellii:1.290758,Deparia_medogensis:1.290758):2.069219):1.0E-8,(Deparia_auriculata:0.319858,(Deparia_sichuanensis:0.319858,Deparia_wilsonii:0.319858):1.0E-8):3.04012):1.0E-8):1.0E-8):8.80964):10.593245,((Deparia_erecta:15.156369,((Deparia_heterophlebia:0.461746,Deparia_yunnanensis:0.461746):5.761408,(Deparia_hainanensis:1.0E-8,Deparia_formosana:1.0E-8):6.223155):8.933214):4.939306,((Deparia_omeiensis:1.0E-8,(Deparia_minamitanii:1.0E-8,(Deparia_dickasonii:1.0E-8,Deparia_concinna:1.0E-8):1.0E-8):1.0E-8):13.148582,(((Deparia_bonincola:8.567937,(Deparia_otomasui:6.792081,(Deparia_lancea:1.601333,Deparia_tomitaroana:1.601333):5.190747):1.775857):0.552241,(Deparia_fenzliana:7.099545,(Deparia_cataracticola:1.844146,(Deparia_prolifera:0.24351,(Deparia_marginalis:0.24351,Deparia_kaalaana:0.24351):1.0E-8):1.600636):5.255399):2.020633):3.390712,(Deparia_conilii:3.963227,(Deparia_kiusiana:2.909405,(Deparia_timetensis:1.795473,(Deparia_tenuifolia:1.174893,((Deparia_petersenii_deflexa:0.408428,Deparia_longipes:0.408428):0.766465,(Deparia_japonica:0.403942,(Deparia_dimorphophylla:0.403942,(Deparia_petersenii_petersenii_var._yakusimensis:0.403942,(Deparia_confluens:0.122772,(Deparia_pseudoconilii:0.122772,(Deparia_lobatocreneta:0.122772,(Deparia_petersenii_petersenii_var._petersenii:0.122772,Deparia_biserialis:0.122772):1.0E-8):1.0E-8):1.0E-8):0.281171):1.0E-8):1.0E-8):0.770951):1.0E-8):0.62058):1.113932):1.053821):8.547664):0.637691):6.947093):2.667187):4.917138):55.64);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr107532]


END;