#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 19, 2024; 15:23 GMT TreeBASE (cc) 1994-2008 Study reference: Crous P.W., Summerell B., Mostert L., & Groenewald J.Z. 2008. Host specificity and speciation of Mycosphaerella and Teratosphaeria species associated with leaf spots of Proteaceae. Persoonia, 20: 59-86. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S2074] BEGIN TAXA; TITLE ITS_only_NJ; DIMENSIONS NTAX=151; TAXLABELS Batcheloromyces_leucadendri_AY260100 Batcheloromyces_leucadendri_AY260101 Batcheloromyces_leucadendri_CBS_111937 Batcheloromyces_leucadendri_CBS_114024 Batcheloromyces_leucadendri_CBS_114144 Batcheloromyces_leucadendri_CBS_114146 Batcheloromyces_leucadendri_EU552103 Batcheloromyces_proteae Batcheloromyces_sedgefieldii Capnobotryella_renispora Catenulostroma_abietis Catenulostroma_elginense Catenulostroma_germanicum Catenulostroma_macowanii_AY260095 Catenulostroma_macowanii_AY260096 Catenulostroma_macowanii_CPC_13899 Catenulostroma_macowanii_CPC_13966 Catenulostroma_wingfieldii_CBS_112163 Cladoriella_eucalypti Devriesia_strelitziae Dissoconium_aciculare Dissoconium_eucalypti Dissoconium_proteae Mycocalicium_victoriae_AJ312123 Mycocalicium_victoriae_AY128701 Mycosphaerella_africana_AY626981 Mycosphaerella_africana_DQ267577 Mycosphaerella_aurantia_AY725531 Mycosphaerella_aurantia_EU042175 Mycosphaerella_buckinghamiae_CBS_111996 Mycosphaerella_buckinghamiae_CBS_112175 Mycosphaerella_communis_AY598876 Mycosphaerella_communis_AY725535 Mycosphaerella_communis_AY725537 Mycosphaerella_communis_AY725539 Mycosphaerella_communis_AY725541 Mycosphaerella_communis_AY725542 Mycosphaerella_communis_DQ302950 Mycosphaerella_ellipsoidea Mycosphaerella_gregaria Mycosphaerella_holualoana Mycosphaerella_konae_AY260086 Mycosphaerella_konae_EF394842 Mycosphaerella_linicola Mycosphaerella_marksii_AF173316 Mycosphaerella_marksii_AF309588 Mycosphaerella_marksii_AF309589 Mycosphaerella_marksii_AY244404 Mycosphaerella_marksii_AY509764 Mycosphaerella_marksii_AY725546 Mycosphaerella_marksii_AY725554 Mycosphaerella_marksii_AY725557 Mycosphaerella_marksii_DQ267587 Mycosphaerella_marksii_DQ302977 Mycosphaerella_marksii_DQ302978 Mycosphaerella_marksii_DQ302979 Mycosphaerella_marksii_DQ302980 Mycosphaerella_marksii_DQ302981 Mycosphaerella_marksii_DQ302982 Mycosphaerella_marksii_DQ302984 Mycosphaerella_marksii_DQ632671 Mycosphaerella_marksii_DQ632674 Mycosphaerella_marksii_EU255899 Mycosphaerella_pseudoellipsoidea Mycosphaerella_punctiformis Mycosphaerella_scytalidii Mycosphaerella_sp. Mycosphaerella_stromatosa Mycosphaerella_waimeana Passalora_schizolobii Phaeotheca_fissurella Phaeotheca_triangularis_AJ238677 Phaeotheca_triangularis_AJ244256 Phaeothecoidea_eucalypti_EF394857 Phaeothecoidea_eucalypti_EU019280 Phaeothecoidea_proteae Pseudocercospora_abelmoschi Pseudocercospora_basiramifera Pseudocercospora_callicarpae Pseudocercospora_cydoniae Pseudocercospora_epispermogoniana Pseudocercospora_flavomarginata Pseudocercospora_lythracearum Pseudocercospora_paraguayensis Pseudocercospora_protearum_var._leucadendri Pseudocercospora_rhoina Pseudocercospora_sp. Pseudotaeniolina_globosa Ramularia_eucalypti Ramularia_pratensis_var._pratensis Ramularia_proteae_CBS_112161 Readeriella_guyanensis Septoria_chromolaenae Septoria_eucalyptorum Septoria_gerberae Septoria_protearum Septoria_sp. Teratosphaeria_alistairii Teratosphaeria_associata_CBS_112627 Teratosphaeria_associata_CBS_114165 Teratosphaeria_associata_DQ302968 Teratosphaeria_associata_EF394826 Teratosphaeria_associata_EF394828 Teratosphaeria_bellula_AY260092 Teratosphaeria_bellula_CBS_111699 Teratosphaeria_bellula_CBS_114145 Teratosphaeria_bellula_CPC_14908 Teratosphaeria_bellula_EU019301 Teratosphaeria_fibrillosa_AY260094 Teratosphaeria_fibrillosa_CPC_13960 Teratosphaeria_fibrillosa_CPC_13969 Teratosphaeria_jonkershoekensis Teratosphaeria_knoxdavesii_CPC_14905 Teratosphaeria_knoxdavesii_CPC_14960 Teratosphaeria_maculiformis Teratosphaeria_marasasii Teratosphaeria_maxii_CBS_112231 Teratosphaeria_maxii_CBS_112232 Teratosphaeria_maxii_CBS_112496 Teratosphaeria_maxii_DQ885898 Teratosphaeria_maxii_DQ885899 Teratosphaeria_microspora_AY260098 Teratosphaeria_microspora_AY559363 Teratosphaeria_microspora_CBS_101951 Teratosphaeria_microspora_CBS_111697 Teratosphaeria_parva_AY244406 Teratosphaeria_parva_AY260091 Teratosphaeria_parva_AY509781 Teratosphaeria_parva_AY626980 Teratosphaeria_parva_AY626986 Teratosphaeria_parva_AY725576 Teratosphaeria_parva_CBS_114761 Teratosphaeria_parva_CPC_12418 Teratosphaeria_parva_CPC_12419 Teratosphaeria_parva_CPC_12421 Teratosphaeria_parva_CPC_13896 Teratosphaeria_parva_CPC_14898 Teratosphaeria_parva_DQ267584 Teratosphaeria_parva_DQ303001 Teratosphaeria_parva_DQ303005 Teratosphaeria_parva_EU255891 Teratosphaeria_persoonii_CBS_122895 Teratosphaeria_persoonii_CBS_122896 'Teratosphaeria proteae-arboreae CPC 12952' 'Teratosphaeria proteae-arboreae CPC 12954' 'Teratosphaeria proteae-arboreae CPC 14963' Teratosphaeria_pseudafricana Teratosphaeria_sp._CPC_13917 Teratosphaeria_sp._CPC_13963 Teratosphaeria_sp._CPC_13981 Teratosphaeria_sp._CPC_14957 ; END; BEGIN TREES; TITLE Tb9088; LINK TAXA = ITS_only_NJ; TREE Unpublished_NJ_Tree = [&R] (Cladoriella_eucalypti,((((Dissoconium_proteae,(Dissoconium_eucalypti,Dissoconium_aciculare)),(((((Mycosphaerella_communis_AY598876,(Mycosphaerella_communis_AY725535,Mycosphaerella_communis_AY725541)),Mycosphaerella_communis_AY725539),Mycosphaerella_communis_AY725537),Mycosphaerella_communis_DQ302950),Mycosphaerella_communis_AY725542)Mycosphaerella_communis),(((((((Mycosphaerella_stromatosa,Mycosphaerella_scytalidii),(Mycosphaerella_pseudoellipsoidea,Mycosphaerella_gregaria)),((((Mycosphaerella_waimeana,Mycosphaerella_holualoana),(Mycosphaerella_konae_EF394842,Mycosphaerella_konae_AY260086)Mycosphaerella_konae),(((Ramularia_pratensis_var._pratensis,Ramularia_eucalypti),Ramularia_proteae_CBS_112161),Mycosphaerella_punctiformis)),(((Mycosphaerella_africana_AY626981,(Mycosphaerella_aurantia_EU042175,((Mycosphaerella_africana_DQ267577,Mycosphaerella_buckinghamiae_CBS_111996),Mycosphaerella_buckinghamiae_CBS_112175))),Mycosphaerella_aurantia_AY725531),Mycosphaerella_ellipsoidea))),(((((Septoria_protearum,Septoria_chromolaenae),(Septoria_eucalyptorum,Septoria_sp.)),Mycosphaerella_linicola),Septoria_gerberae),(((((((Pseudocercospora_abelmoschi,Pseudocercospora_paraguayensis),Pseudocercospora_callicarpae),Pseudocercospora_lythracearum),Pseudocercospora_basiramifera),((Pseudocercospora_cydoniae,(Pseudocercospora_flavomarginata,(Pseudocercospora_sp.,Passalora_schizolobii))),Mycosphaerella_sp.)),Pseudocercospora_rhoina),Pseudocercospora_protearum_var._leucadendri))),((((Mycosphaerella_marksii_AF173316,Mycosphaerella_marksii_AF309588),((((((((((Mycosphaerella_marksii_AY725554,(((((Mycosphaerella_marksii_DQ302981,Mycosphaerella_marksii_EU255899),Mycosphaerella_marksii_AY725557),Mycosphaerella_marksii_DQ302982),Mycosphaerella_marksii_DQ632671),Mycosphaerella_marksii_AY725546)),Mycosphaerella_marksii_DQ302979),Mycosphaerella_marksii_AF309589),Mycosphaerella_marksii_DQ302977),Mycosphaerella_marksii_DQ302978),Mycosphaerella_marksii_DQ302984),Mycosphaerella_marksii_DQ267587),Pseudocercospora_epispermogoniana),Mycosphaerella_marksii_DQ302980),Mycosphaerella_marksii_AY509764)),Mycosphaerella_marksii_DQ632674),Mycosphaerella_marksii_AY244404)Mycosphaerella_marksii),((((((((Teratosphaeria_bellula_AY260092,(((Teratosphaeria_bellula_EU019301,Teratosphaeria_bellula_CBS_114145),Teratosphaeria_bellula_CPC_14908),Teratosphaeria_bellula_CBS_111699))Teratosphaeria_bellula,(Teratosphaeria_persoonii_CBS_122896,Teratosphaeria_persoonii_CBS_122895)Teratosphaeria_persoonii),(Teratosphaeria_sp._CPC_14957,Teratosphaeria_marasasii)),(((Teratosphaeria_associata_EF394826,(Teratosphaeria_associata_CBS_112627,Teratosphaeria_associata_DQ302968)),(Teratosphaeria_associata_CBS_114165,Teratosphaeria_associata_EF394828))Teratosphaeria_associata,((((Teratosphaeria_microspora_AY559363,Teratosphaeria_microspora_CBS_111697),(Teratosphaeria_microspora_AY260098,(Teratosphaeria_microspora_CBS_101951,Catenulostroma_germanicum))),Catenulostroma_abietis),((((Teratosphaeria_parva_AY509781,(Teratosphaeria_parva_AY260091,Teratosphaeria_parva_CPC_13896)),Teratosphaeria_parva_CBS_114761),(Teratosphaeria_parva_AY626980,((((((Teratosphaeria_parva_DQ267584,(Teratosphaeria_parva_AY626986,Teratosphaeria_parva_AY725576)),Teratosphaeria_parva_AY244406),Teratosphaeria_parva_CPC_12421),Teratosphaeria_parva_DQ303001),Teratosphaeria_parva_DQ303005),((Teratosphaeria_parva_CPC_12418,Teratosphaeria_parva_EU255891),Teratosphaeria_parva_CPC_12419)))),Teratosphaeria_parva_CPC_14898)Teratosphaeria_parva))),(((((Catenulostroma_elginense,(Mycocalicium_victoriae_AJ312123,Mycocalicium_victoriae_AY128701)Mycocalicium_victoriae),(((Teratosphaeria_maculiformis,(('Teratosphaeria proteae-arboreae CPC 14963',('Teratosphaeria proteae-arboreae CPC 12952','Teratosphaeria proteae-arboreae CPC 12954'))'Teratosphaeria proteae-arboreae',(Teratosphaeria_fibrillosa_AY260094,(Teratosphaeria_fibrillosa_CPC_13960,Teratosphaeria_fibrillosa_CPC_13969))Teratosphaeria_fibrillosa)),((((Catenulostroma_macowanii_AY260096,(Catenulostroma_macowanii_AY260095,Catenulostroma_macowanii_CPC_13899))Catenulostroma_macowanii,Catenulostroma_macowanii_CPC_13966),(Teratosphaeria_maxii_DQ885898,(Teratosphaeria_maxii_DQ885899,((Teratosphaeria_maxii_CBS_112231,Teratosphaeria_maxii_CBS_112496),Teratosphaeria_maxii_CBS_112232)))Teratosphaeria_maxii),Catenulostroma_wingfieldii_CBS_112163)),(Phaeothecoidea_eucalypti_EU019280,Phaeothecoidea_eucalypti_EF394857)Phaeothecoidea_eucalypti)),(((Batcheloromyces_leucadendri_EU552103,(((Batcheloromyces_leucadendri_AY260100,Batcheloromyces_leucadendri_CBS_114024),Batcheloromyces_leucadendri_CBS_111937),((Batcheloromyces_leucadendri_AY260101,(Batcheloromyces_leucadendri_CBS_114144,Batcheloromyces_leucadendri_CBS_114146)),Batcheloromyces_proteae))),Teratosphaeria_alistairii),Batcheloromyces_sedgefieldii)),(Teratosphaeria_sp._CPC_13917,(Teratosphaeria_sp._CPC_13963,Teratosphaeria_jonkershoekensis))),Pseudotaeniolina_globosa)),(Teratosphaeria_pseudafricana,Phaeothecoidea_proteae)),Readeriella_guyanensis),(((Teratosphaeria_knoxdavesii_CPC_14960,Teratosphaeria_knoxdavesii_CPC_14905)Teratosphaeria_knoxdavesii,Teratosphaeria_sp._CPC_13981),Devriesia_strelitziae))),(Phaeotheca_fissurella,(Phaeotheca_triangularis_AJ244256,Phaeotheca_triangularis_AJ238677)Phaeotheca_triangularis))),Capnobotryella_renispora)); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr1085] END;