#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 18, 2024; 20:57 GMT

TreeBASE (cc) 1994-2008

Study reference:
Kuo L., Chen C., Shinohara W., Ebihara A., Hiroshi K., Hirotoshi S., Huang Y., &
Chiou W. 2017. Not only in the temperate zone: independent gametophytes of two vittarioid
ferns (Pteridaceae, Polypodiales) in East Asian subtropics. Journal of
Plant Research, 130: 407-416.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S19921]

BEGIN TAXA;
        TITLE  Taxa;
        DIMENSIONS NTAX=61;
        TAXLABELS
            Acrostichum_aureum
            Adiantum_capillusveneris
            Alsophila_spinulosa
            Ananthacorus_angustifolius
            Anetium_citrifolium
            Antrophyopsis_boryana
            Antrophyum_formosanum
            Ceratopteris_thalictroides
            Cheilanthes_lindheimeri
            Coniogramme_japonica
            Cryptogramma_crispa
            Dryopteris_squamiseta
            Haplopteris_alternans
            Haplopteris_amboinensis
            Haplopteris_angusteelongata
            Haplopteris_angustifolia
            Haplopteris_dareicarpa
            Haplopteris_doniana
            Haplopteris_elongata
            Haplopteris_ensiformis
            Haplopteris_flexuosa
            Haplopteris_forrestiana
            Haplopteris_fudzinoi
            Haplopteris_guineensis
            Haplopteris_hainanensis
            Haplopteris_heterophylla
            Haplopteris_himalayensis
            Haplopteris_humblotii
            Haplopteris_linearifolia
            Haplopteris_longicoma
            Haplopteris_malayensis
            Haplopteris_mediosora
            Haplopteris_plurisulcata
            Haplopteris_scolopendrina
            Haplopteris_sessilifrons
            Haplopteris_sikkimensis
            Haplopteris_sp1_gametophyte_Fushan
            Haplopteris_sp1_gametophyte_Hanaage_River
            Haplopteris_sp1_gametophyte_Tsaopi
            Haplopteris_sp2_gametophyte_Fushan_A
            Haplopteris_sp2_gametophyte_Fushan_B
            Haplopteris_taeniophylla
            Haplopteris_volkensii
            Haplopteris_yakushimensis_Amami
            Haplopteris_yakushimensis_Yakushima
            Haplopteris_zosterifolia
            Monogramma_capillaris
            Monogramma_graminea
            Onychium_siliculosum
            Parahemionitis_arifolia
            Polytaenium_lineatum
            Pteridium_aquilinum
            Pteris_fauriei
            Radiovittaria_gardneriana
            Rheopteris_cheesmaniae
            Scoliosorus_ensiformis
            Vaginularia_paradoxa
            Vittaria_crispomarginata
            Vittaria_lineata
            Vittaria_lloydifolia
            Vittaria_rigida
            ;
END;

BEGIN TREES;
      TITLE 'Vittarioids ndhF+chlL+matK';
      LINK TAXA = Taxa;
      TREE TREE1 = [&R] ((Alsophila_spinulosa:50.313732514409764,(Dryopteris_squamiseta:37.90051480819052,Pteridium_aquilinum:37.90051480819052):12.413217706219243):54.550189067801924,(((Cryptogramma_crispa:28.123189574364616,Coniogramme_japonica:28.123189574364616):58.07312048406348,((Pteris_fauriei:27.15245000670386,Onychium_siliculosum:27.15245000670386):47.2435257002232,(Acrostichum_aureum:39.69613601063675,Ceratopteris_thalictroides:39.69613601063675):34.69983969629031):11.800334351501036):9.279106035345876,((Parahemionitis_arifolia:29.3690549405309,Cheilanthes_lindheimeri:29.3690549405309):55.36151692724431,(Adiantum_capillusveneris:72.6421403585607,((Rheopteris_cheesmaniae:34.18940371946401,Vaginularia_paradoxa:34.18940371946401):18.01255368970591,(((Antrophyum_formosanum:22.769818949350125,Antrophyopsis_boryana:22.769818949350125):12.300398477024231,((Anetium_citrifolium:13.546676919807268,Polytaenium_lineatum:13.546676919807268):9.80070155469324,(Vittaria_lineata:21.073243608786512,(Scoliosorus_ensiformis:12.088009538177033,Ananthacorus_angustifolius:12.088009538177033):8.98523407060948):2.2741348657139966):11.722838951873847):6.249083992743238,(Radiovittaria_gardneriana:29.97217084555885,((Monogramma_graminea:15.788164148578517,(Haplopteris_volkensii:8.563273936854202,(Haplopteris_guineensis:2.826202543119237,Haplopteris_humblotii:2.826202543119237):5.737071393734965):7.224890211724315):4.591776819421241,((Haplopteris_longicoma:14.29961934420416,(Haplopteris_dareicarpa:11.468286447517883,((Monogramma_capillaris:0.4199632345810471,(Haplopteris_sp2_gametophyte_Fushan_B:0.03936028760170984,Haplopteris_sp2_gametophyte_Fushan_A:0.03936028760170984):0.3806029469793373):9.262125196013116,(((Haplopteris_angustifolia:0.34844595160178926,Vittaria_lloydifolia:0.34844595160178926):7.860444462847525,(Haplopteris_elongata:1.999454545379649,(Vittaria_crispomarginata:1.4137617744024737,Haplopteris_zosterifolia:1.4137617744024737):0.5856927709771753):6.209435869069665):0.8264146754294899,((Haplopteris_hainanensis:5.8777058879601185,Haplopteris_sikkimensis:5.8777058879601185):1.7057229615573277,(Haplopteris_sessilifrons:5.001746836494419,((Haplopteris_alternans:0.7734433698784926,Haplopteris_angusteelongata:0.7734433698784926):2.3480495553321816,(Vittaria_rigida:1.6693622094212657,Haplopteris_ensiformis:1.6693622094212657):1.4521307157894086):1.880253911283745):2.581682013023027):1.4518762403613579):0.6467833407153591):1.78619801692372):2.831332896686277):2.542151034002231,(((Haplopteris_amboinensis:6.659058613103454,Haplopteris_flexuosa:6.659058613103454):2.4546348004711405,(Haplopteris_heterophylla:5.518620962399353,((Haplopteris_yakushimensis_Yakushima:0.040889313842427555,Haplopteris_yakushimensis_Amami:0.040889313842427555):3.049775211506855,(Haplopteris_sp1_gametophyte_Tsaopi:0.14222891383397496,(Haplopteris_sp1_gametophyte_Fushan:0.04542774590762377,Haplopteris_sp1_gametophyte_Hanaage_River:0.04542774590762377):0.09680116792635118):2.9484356115153076):2.427956437050071):3.595072451175241):2.4864479729446174,(Haplopteris_scolopendrina:9.520680952098203,(Haplopteris_malayensis:8.379814024406642,((Haplopteris_himalayensis:2.1614468576627957,Haplopteris_mediosora:2.1614468576627957):4.399482599869003,(Haplopteris_taeniophylla:0.19071411079245593,((Haplopteris_forrestiana:0.02977667399765238,Haplopteris_linearifolia:0.02977667399765238):0.09099625469922756,(Haplopteris_fudzinoi:0.05972382514746499,(Haplopteris_plurisulcata:0.027792559811572914,Haplopteris_doniana:0.027792559811572914):0.03193126533589208):0.06104910354941495):0.06994118209557598):6.370215346739343):1.8188845668748428):1.1408669276915617):2.0794604344210086):5.241628991687179):3.538170589793367):9.592229877559092):11.347130573558744):10.882655990052328):20.440182949390774):12.088431509214516):10.744844225998762):9.388505488437715);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr108958]


END;