#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 09, 2024; 23:15 GMT

TreeBASE (cc) 1994-2008

Study reference:
Pirie M.D., Maas P.J., Wilschut R., Melchers-sharrott H., & Chatrou L.W. 2018. Parallel
diversifications of Cremastosperma and Mosannona (Annonaceae), tropical rainforest
trees tracking Neogene upheaval of the South American continent. Royal
Society Open Science, .

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S20848]

BEGIN TAXA;
        TITLE  Taxa;
        DIMENSIONS NTAX=49;
        TAXLABELS
            Annickia_pilosa_0977
            Cremastosperma_brevipes_0601
            Cremastosperma_bullatum_1100
            Cremastosperma_bullatum_1102
            Cremastosperma_cauliflorum_0312
            Cremastosperma_cauliflorum_0598
            Cremastosperma_gracilipes_0491
            Cremastosperma_leiophyllum_0594
            Cremastosperma_longicuspe_0745
            Cremastosperma_longicuspe_0753
            Cremastosperma_macrocarpum_0741
            Cremastosperma_magdalenae_1270
            Cremastosperma_megalophyllum_0087
            Cremastosperma_megalophyllum_0490
            Cremastosperma_megalophyllum_0493
            Cremastosperma_microcarpum_0082
            Cremastosperma_microcarpum_0303
            Cremastosperma_monospermum_0596
            Cremastosperma_napoense_0737
            Cremastosperma_novogranatense_0744
            Cremastosperma_oblongum_0600
            Cremastosperma_oblongum_0739
            Cremastosperma_oblongum_1097
            Cremastosperma_panamense_0747
            Cremastosperma_pedunculatum_0754
            Cremastosperma_pedunculatum_0760
            Cremastosperma_pendulum_0742
            Cremastosperma_pendulum_0749
            Cremastosperma_pendulum_0751
            Cremastosperma_pendulum_1098
            Cremastosperma_peruvianum_0755
            Cremastosperma_sp_0765
            Cremastosperma_sp_CostaRica_0245
            Cremastosperma_spB_0756
            Cremastosperma_spBaff_0758
            Cremastosperma_stenophyllum_0767
            Cremastosperma_venezuelanum_0757
            Cremastosperma_westrae_0761
            Cremastosperma_yamayacatense_1099
            Cremastosperma_yamayakatense_1101
            Ephedranthus_sp_0105
            Klarobelia_inundata_0301
            Malmea_dielsiana_0260
            Malmea_spnov_0197
            Not_Cremastosperma_sp_0750
            Onychopetalum_periquino_0017
            Pseudoxandra_lucida_0307
            Pseudoxandra_spiritussancti_0110
            Sapranthus_viridiflorus_0211
            ;
END;

BEGIN TREES;
      TITLE Cremastosperma_All_Taxa;
      LINK TAXA = Taxa;
      TREE RAxML_all = [&R] (((Sapranthus_viridiflorus_0211:0.016004702547098765,Not_Cremastosperma_sp_0750:0.008926037525066967)100:0.004891638707378876,((((((Cremastosperma_macrocarpum_0741:0.0026427406714294344,Cremastosperma_brevipes_0601:0.001926670267141153)67:1.00000050002909E-6,Cremastosperma_venezuelanum_0757:0.0013731401537915586)91:8.84430008880544E-4,(((Cremastosperma_stenophyllum_0767:0.003041032261693567,(Cremastosperma_panamense_0747:0.0027369197059704553,(Cremastosperma_westrae_0761:0.002468341741234524,Cremastosperma_novogranatense_0744:1.00000050002909E-6)90:6.99703668581701E-4)99:0.0012230311686963178)98:0.0010649927775747722,((((((Cremastosperma_spBaff_0758:0.0025896640403951284,(Cremastosperma_spB_0756:9.745240222114309E-4,Cremastosperma_leiophyllum_0594:0.0020189342858859035)46:1.00000050002909E-6)41:3.0153017718303316E-4,(Cremastosperma_oblongum_0600:6.193439081754579E-4,Cremastosperma_oblongum_0739:1.00000050002909E-6)65:3.0720519550491235E-4)46:1.532324534908068E-4,((Cremastosperma_longicuspe_0745:0.0012787738034215556,(((Cremastosperma_peruvianum_0755:0.003157146918166078,Cremastosperma_monospermum_0596:0.0012418691796911745)40:1.00000050002909E-6,Cremastosperma_pendulum_0751:0.0017203404985390374)34:4.585365644209113E-4,(Cremastosperma_pendulum_0749:2.581439760602093E-4,Cremastosperma_pendulum_1098:0.0013462487647508362)45:2.1757893673370892E-4)8:1.00000050002909E-6)12:1.524019387956012E-4,Cremastosperma_oblongum_1097:0.001147091927846956)13:1.529975613161205E-4)31:3.5095415963843116E-4,((Cremastosperma_pedunculatum_0760:5.650012373624655E-4,(Cremastosperma_longicuspe_0753:0.0032791232882468627,Cremastosperma_pedunculatum_0754:0.0011560061278472668)56:2.9256425641795955E-4)45:1.00000050002909E-6,((Cremastosperma_yamayacatense_1099:4.768055635806462E-4,Cremastosperma_yamayakatense_1101:1.00000050002909E-6)81:2.381424055634256E-4,Cremastosperma_pendulum_0742:2.5292170937907927E-4)63:1.6839659362689682E-4)85:0.0011017129272065552)61:9.098268200076161E-4,(Cremastosperma_sp_0765:0.0030640750686892794,(Cremastosperma_microcarpum_0082:0.0038014404237088645,(((Cremastosperma_microcarpum_0303:3.0727753513728605E-4,((Cremastosperma_megalophyllum_0493:1.00000050002909E-6,Cremastosperma_cauliflorum_0598:6.19994945645269E-4)18:1.00000050002909E-6,(Cremastosperma_megalophyllum_0490:1.00000050002909E-6,(Cremastosperma_megalophyllum_0087:0.002559027035483682,(Cremastosperma_cauliflorum_0312:2.0580433966383758E-4,Cremastosperma_gracilipes_0491:2.684882203515222E-4)50:2.048414291762069E-4)19:1.00000050002909E-6)47:2.047651468543147E-4)3:1.00000050002909E-6)6:1.00000050002909E-6,Cremastosperma_napoense_0737:6.256456324721456E-4)28:1.00000050002909E-6,(Cremastosperma_bullatum_1102:5.437216117268645E-4,Cremastosperma_bullatum_1100:7.234807017029916E-4)94:5.34792927910699E-4)50:5.18579846365817E-4)53:1.6902216932336664E-4)69:6.925298787292776E-4)44:1.00000050002909E-6,Cremastosperma_sp_CostaRica_0245:0.0011037399615037877)46:2.443157004951125E-4)45:8.001218831756148E-4,Cremastosperma_magdalenae_1270:0.0013818118146278235)67:2.384313915145894E-4)100:0.004277564901870684,(Pseudoxandra_spiritussancti_0110:0.004573246611468167,Pseudoxandra_lucida_0307:0.003947390978942275)84:5.342204685718136E-4)99:0.0011193175553042634,(Malmea_dielsiana_0260:0.0031402136265713107,Malmea_spnov_0197:0.0015080591636759785)100:0.009961777309695441)88:5.300629645105218E-4,(Onychopetalum_periquino_0017:0.010422763961581523,(Klarobelia_inundata_0301:0.007302355684305294,Ephedranthus_sp_0105:0.007783065809837431)100:0.005578760357159708)89:7.375715997197953E-4)33:4.773083531664999E-4):0.009885335058561234,Annickia_pilosa_0977:0.009885335058561234);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr110078]


END;