#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 19, 2024; 6:39 GMT

TreeBASE (cc) 1994-2008

Study reference:
De silva D., Groenewald J.Z., Crous P.W., Ades P., Nasruddin A., Mongkolporn O.,
& Taylor P.W. 2019. Identification, prevalence and pathogenicity of Colletotrichum
species causing anthracnose of Capsicum annuum in Asia. IMA Fungus, .

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S23829]

BEGIN TAXA;
        TITLE  Taxa;
        DIMENSIONS NTAX=100;
        TAXLABELS
            Colletotrichum_abscissum_CDA918
            'Colletotrichum acutatum CBS_112996'
            'Colletotrichum acutatum CBS_127539'
            'Colletotrichum australisinense CGMCC_3.18886'
            'Colletotrichum bannaense CGMCC_3.18887'
            'Colletotrichum boninense CBS_123755'
            'Colletotrichum brisbanense CBS_292.67'
            'Colletotrichum cairnsense _CBS_140847'
            'Colletotrichum chrysanthemi CBS_126518'
            Colletotrichum_citri_YN01
            'Colletotrichum cosmi CBS_853.73'
            'Colletotrichum costaricense CBS_330.75'
            'Colletotrichum cuscutae IMI_304802'
            'Colletotrichum fioriniae CBS_128517'
            'Colletotrichum godetiae CBS_133.44'
            'Colletotrichum guajavae CPC_18893'
            'Colletotrichum indonesiense CBS_127551'
            'Colletotrichum javanense UOM_1115'
            'Colletotrichum laticiphilum CBS_112989'
            'Colletotrichum limetticola CBS_114.14'
            'Colletotrichum lupini CBS_109225'
            'Colletotrichum melonis CBS_159.84'
            'Colletotrichum nymphaeae CBS_515.78'
            'Colletotrichum paranaense CPC_20901'
            'Colletotrichum paxtonii IMI_165753'
            'Colletotrichum salicis CBS_607.94'
            'Colletotrichum scovillei CBS_120708'
            'Colletotrichum scovillei CBS_126529'
            'Colletotrichum scovillei CPC_28551'
            'Colletotrichum scovillei CPC_28552'
            'Colletotrichum scovillei CPC_28577'
            'Colletotrichum scovillei CPC_28579'
            'Colletotrichum scovillei CPC_28591'
            'Colletotrichum scovillei CPC_28593'
            'Colletotrichum scovillei CPC_28599'
            'Colletotrichum scovillei CPC_28603'
            'Colletotrichum scovillei CPC_28615'
            'Colletotrichum scovillei CPC_28617'
            'Colletotrichum scovillei CPC_30197'
            'Colletotrichum scovillei CPC_30198'
            'Colletotrichum scovillei CPC_30199'
            'Colletotrichum scovillei CPC_30200'
            'Colletotrichum scovillei CPC_30201'
            'Colletotrichum scovillei CPC_30202'
            'Colletotrichum scovillei CPC_30205'
            'Colletotrichum scovillei CPC_30206'
            'Colletotrichum scovillei CPC_30215'
            'Colletotrichum scovillei CPC_30216'
            'Colletotrichum scovillei CPC_30217'
            'Colletotrichum scovillei CPC_30218'
            'Colletotrichum scovillei CPC_30219'
            'Colletotrichum scovillei CPC_30220'
            'Colletotrichum scovillei CPC_30229'
            'Colletotrichum scovillei CPC_30230'
            'Colletotrichum scovillei CPC_30231'
            'Colletotrichum scovillei CPC_30232'
            'Colletotrichum scovillei CPC_30239'
            'Colletotrichum scovillei CPC_30240'
            'Colletotrichum scovillei CPC_30241'
            'Colletotrichum scovillei CPC_30242'
            'Colletotrichum scovillei CPC_30243'
            'Colletotrichum scovillei CPC_30244'
            'Colletotrichum scovillei CPC_30246'
            'Colletotrichum scovillei CPC_30247'
            'Colletotrichum scovillei CPC_30248'
            'Colletotrichum scovillei CPC_30249'
            'Colletotrichum scovillei CPC_30250'
            'Colletotrichum scovillei CPC_30251'
            'Colletotrichum scovillei CPC_30252'
            'Colletotrichum scovillei UOM_1101'
            'Colletotrichum scovillei UOM_1102'
            'Colletotrichum scovillei UOM_1103'
            'Colletotrichum scovillei UOM_1104'
            'Colletotrichum scovillei UOM_1105'
            'Colletotrichum scovillei UOM_1106'
            'Colletotrichum scovillei UOM_1107'
            'Colletotrichum scovillei UOM_1108'
            'Colletotrichum scovillei UOM_1109'
            'Colletotrichum scovillei UOM_1110'
            'Colletotrichum scovillei UOM_1111'
            'Colletotrichum scovillei UOM_1112'
            'Colletotrichum scovillei UOM_1113'
            'Colletotrichum scovillei UOM_1114'
            'Colletotrichum scovillei UOM_1140'
            'Colletotrichum scovillei UOM_1141'
            'Colletotrichum scovillei UOM_1142'
            'Colletotrichum scovillei UOM_1143'
            'Colletotrichum scovillei UOM_1144'
            'Colletotrichum scovillei UOM_1145'
            'Colletotrichum scovillei UOM_1146'
            'Colletotrichum scovillei UOM_1147'
            'Colletotrichum scovillei UOM_1148'
            'Colletotrichum scovillei UOM_1149'
            'Colletotrichum scovillei UOM_1150'
            'Colletotrichum scovillei UOM_1151'
            'Colletotrichum scovillei UOM_1152'
            'Colletotrichum simmondsii BRIP_28519'
            'Colletotrichum sloanei IMI_364297'
            'Colletotrichum tamarilloi CBS_129814'
            'Colletotrichum walleri CBS_125472'
            ;
END;

BEGIN TREES;
      TITLE Acutatum_complex;
      LINK TAXA = Taxa;
      TREE Fig._1 = [&R] ('Colletotrichum boninense CBS_123755':192.0,(('Colletotrichum godetiae CBS_133.44':31.0,'Colletotrichum salicis CBS_607.94':39.0):34.0,(('Colletotrichum acutatum CBS_112996':3.0,'Colletotrichum acutatum CBS_127539':1.0):39.0,('Colletotrichum fioriniae CBS_128517':54.0,(('Colletotrichum cuscutae IMI_304802':12.0,('Colletotrichum lupini CBS_109225':10.0,(('Colletotrichum tamarilloi CBS_129814':13.0,(Colletotrichum_abscissum_CDA918:11.0,'Colletotrichum costaricense CBS_330.75':6.0):3.0):1.0,('Colletotrichum limetticola CBS_114.14':4.0,('Colletotrichum melonis CBS_159.84':11.0,'Colletotrichum paranaense CPC_20901':4.0):3.0):4.0):1.0):3.0):24.0,((('Colletotrichum sloanei IMI_364297':6.0,('Colletotrichum paxtonii IMI_165753':5.0,'Colletotrichum simmondsii BRIP_28519':16.0):9.0):10.0,(('Colletotrichum brisbanense CBS_292.67':9.0,'Colletotrichum javanense UOM_1115':10.0):7.0,('Colletotrichum indonesiense CBS_127551':9.0,('Colletotrichum bannaense CGMCC_3.18887':6.0,'Colletotrichum laticiphilum CBS_112989':5.0):5.0):2.0):3.0):7.0,(('Colletotrichum cosmi CBS_853.73':14.0,'Colletotrichum walleri CBS_125472':11.0):6.0,(('Colletotrichum chrysanthemi CBS_126518':30.0,('Colletotrichum australisinense CGMCC_3.18886':9.0,'Colletotrichum cairnsense _CBS_140847':8.0):12.0):2.0,((Colletotrichum_citri_YN01:8.0,'Colletotrichum nymphaeae CBS_515.78':3.0):15.0,('Colletotrichum guajavae CPC_18893':2.0,('Colletotrichum scovillei CBS_120708':0.0,'Colletotrichum scovillei CBS_126529':0.0,'Colletotrichum scovillei CPC_28552':6.0,'Colletotrichum scovillei CPC_28599':0.0,'Colletotrichum scovillei CPC_28603':0.0,'Colletotrichum scovillei CPC_28615':2.0,'Colletotrichum scovillei CPC_28617':0.0,'Colletotrichum scovillei CPC_30197':6.0,'Colletotrichum scovillei CPC_30201':0.0,'Colletotrichum scovillei CPC_30216':3.0,'Colletotrichum scovillei CPC_30217':0.0,'Colletotrichum scovillei CPC_30220':0.0,'Colletotrichum scovillei CPC_30229':1.0,'Colletotrichum scovillei CPC_30239':0.0,'Colletotrichum scovillei CPC_30241':0.0,'Colletotrichum scovillei CPC_30242':0.0,'Colletotrichum scovillei CPC_30244':0.0,'Colletotrichum scovillei CPC_30246':1.0,'Colletotrichum scovillei CPC_30248':1.0,'Colletotrichum scovillei CPC_30249':0.0,'Colletotrichum scovillei CPC_30250':0.0,'Colletotrichum scovillei CPC_30252':0.0,'Colletotrichum scovillei UOM_1140':2.0,'Colletotrichum scovillei UOM_1141':0.0,'Colletotrichum scovillei UOM_1142':0.0,'Colletotrichum scovillei UOM_1143':0.0,'Colletotrichum scovillei UOM_1148':2.0,'Colletotrichum scovillei UOM_1149':0.0,'Colletotrichum scovillei UOM_1151':0.0,'Colletotrichum scovillei UOM_1152':0.0,('Colletotrichum scovillei CPC_28593':2.0,'Colletotrichum scovillei CPC_30232':5.0):2.0,('Colletotrichum scovillei CPC_30206':7.0,'Colletotrichum scovillei CPC_30247':0.0):1.0,('Colletotrichum scovillei UOM_1107':4.0,('Colletotrichum scovillei UOM_1104':0.0,'Colletotrichum scovillei UOM_1105':0.0):1.0):1.0,('Colletotrichum scovillei CPC_30230':6.0,('Colletotrichum scovillei CPC_30215':8.0,('Colletotrichum scovillei CPC_28577':0.0,'Colletotrichum scovillei CPC_28579':3.0):3.0):1.0):1.0,('Colletotrichum scovillei UOM_1144':1.0,('Colletotrichum scovillei UOM_1147':0.0,('Colletotrichum scovillei UOM_1145':0.0,'Colletotrichum scovillei UOM_1146':0.0):2.0):3.0):5.0,('Colletotrichum scovillei CPC_30199':7.0,'Colletotrichum scovillei CPC_30218':1.0,'Colletotrichum scovillei CPC_30219':5.0,'Colletotrichum scovillei CPC_30240':3.0,'Colletotrichum scovillei CPC_30243':0.0,'Colletotrichum scovillei CPC_30251':0.0):1.0,(('Colletotrichum scovillei CPC_28551':1.0,'Colletotrichum scovillei CPC_30205':2.0):1.0,('Colletotrichum scovillei CPC_30231':0.0,('Colletotrichum scovillei CPC_28591':2.0,'Colletotrichum scovillei CPC_30200':4.0):1.0,('Colletotrichum scovillei CPC_30198':2.0,'Colletotrichum scovillei CPC_30202':5.0):1.0):0.0):2.0,('Colletotrichum scovillei UOM_1110':1.0,('Colletotrichum scovillei UOM_1101':2.0,'Colletotrichum scovillei UOM_1102':0.0,'Colletotrichum scovillei UOM_1103':2.0,'Colletotrichum scovillei UOM_1150':0.0):1.0,('Colletotrichum scovillei UOM_1109':4.0,(('Colletotrichum scovillei UOM_1111':3.0,('Colletotrichum scovillei UOM_1106':2.0,'Colletotrichum scovillei UOM_1108':4.0):2.0):2.0,('Colletotrichum scovillei UOM_1112':0.0,'Colletotrichum scovillei UOM_1113':1.0,'Colletotrichum scovillei UOM_1114':1.0):0.0):1.0):2.0):1.0):8.0):10.0):1.0):1.0):2.0):10.0):19.0):19.0):36.0):205.0):0.0;
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr115950]


END;