#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 21, 2024; 23:47 GMT TreeBASE (cc) 1994-2008 Study reference: Van de kerke S.J., Shrestha B., Ruhlman T.A., Weng M., Jansen R.K., Jones C.S., Schlichting C.D., Hosseini S., Mohammadin S., Schranz M.E., & Bakker F.T. 2019. Plastome Based Phylogenetics and Younger Crown Node Age in Pelargonium. Molecular Phylogenetics and Evolution, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S24185] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=116; TAXLABELS Hypseocharis_biloba 'Pelargonium Hoarea_329A' Pelargonium_acetosum Pelargonium_aciculatum Pelargonium_acraeum Pelargonium_aff_lobatum Pelargonium_album Pelargonium_alchemilloides Pelargonium_alternans Pelargonium_antidysentericum Pelargonium_appendiculatum Pelargonium_aridum Pelargonium_articulatum Pelargonium_auritum Pelargonium_australe_2 Pelargonium_barklyi Pelargonium_candicans_1 Pelargonium_candicans_2 Pelargonium_capitatum Pelargonium_carnosum Pelargonium_caucalifolium Pelargonium_caylae Pelargonium_citronellum_2 Pelargonium_cordifolium Pelargonium_cotyledonis Pelargonium_crassicaule Pelargonium_crispum_1 Pelargonium_crispum_2 Pelargonium_crithmifolium Pelargonium_cucculatum Pelargonium_denticulatum_1 Pelargonium_desertorum Pelargonium_echinatum Pelargonium_elegans Pelargonium_elongatum_2 Pelargonium_endlicherianum Pelargonium_englerianum Pelargonium_exhibens Pelargonium_exstipulatum Pelargonium_fissifolium Pelargonium_frutetorum Pelargonium_fulgidum_2 Pelargonium_gibbosum_2 Pelargonium_glutinosum Pelargonium_grandicalcaratum_1 Pelargonium_grandiflorum_1 Pelargonium_grandiflorum_2 Pelargonium_graveolens Pelargonium_griseum Pelargonium_grossularoides Pelargonium_hirtipetalum Pelargonium_hirtum_1 Pelargonium_hirtum_2 Pelargonium_hispidum Pelargonium_incrassatum Pelargonium_inquinans Pelargonium_ionidiflorum Pelargonium_karooicum_1 Pelargonium_karooicum_2_ Pelargonium_klinghardtense Pelargonium_laxum Pelargonium_leipoldtii_2 Pelargonium_littorale Pelargonium_lobatum_1 Pelargonium_luridum_1 Pelargonium_luridum_2 Pelargonium_luteolum_2 Pelargonium_luteolum_3 Pelargonium_minimum_1 Pelargonium_mollicomum Pelargonium_multibraceatum Pelargonium_multicaule Pelargonium_mutans Pelargonium_myrrhifolium Pelargonium_nanum Pelargonium_odoratissimum Pelargonium_otaviense Pelargonium_panduriforme Pelargonium_patulum Pelargonium_peltatum Pelargonium_petroselenifolium Pelargonium_pillansii Pelargonium_pinnatum Pelargonium_plurisectum Pelargonium_praemorsum Pelargonium_pseudoglutinosum_1 Pelargonium_pseudoglutinosum_2 Pelargonium_pulchellum Pelargonium_radens Pelargonium_radicatum Pelargonium_ranunculophyllum Pelargonium_rapaceum_1 Pelargonium_reniforme_1 Pelargonium_rodneyanum Pelargonium_saxifragoides Pelargonium_schizopetalum Pelargonium_senecioides Pelargonium_sidoides Pelargonium_spinosum Pelargonium_tenuicaule Pelargonium_tongaense Pelargonium_tragacanthoides Pelargonium_transvaalense Pelargonium_trifidum_1 Pelargonium_trifidum_2 Pelargonium_triste_2 Pelargonium_undulatum_1 Pelargonium_undulatum_2 Pelargonium_viscosissimum Pelargonium_worcesterae_1 Pelargonium_worcesterae_2 Pelargonium_wuppertalense Pelargonium_x_fragrans_1 Pelargonium_x_limoneum Pelargonium_xerophyton Pelargonium_zonale ; END; BEGIN TREES; TITLE Pelargonium_ITS_alignment; LINK TAXA = Taxa; TREE tree1 = [&R] (Hypseocharis_biloba:0.03576877685,((((Pelargonium_antidysentericum:0.0057523196,(Pelargonium_mutans:0.0031620589,(Pelargonium_praemorsum:0.0025015925,(Pelargonium_trifidum_2:0.0021097704,((Pelargonium_griseum:2.4839E-6,Pelargonium_tragacanthoides:3.881151E-4):0.0022847933,(Pelargonium_trifidum_1:0.0056230028,(Pelargonium_senecioides:0.00529272,Pelargonium_tenuicaule:0.0014759971):0.0021566728):0.0012513241):1.951203E-4):8.859132E-4):0.0024124771):0.0026420731):7.015381E-4,(((Pelargonium_exhibens:0.0010140269,Pelargonium_mollicomum:0.0012329846):3.002994E-4,(Pelargonium_worcesterae_1:0.0083257691,Pelargonium_worcesterae_2:2.779324E-4):0.0016348283):0.0015472338,(Pelargonium_multicaule:8.02097E-4,(Pelargonium_myrrhifolium:0.001403989,(Pelargonium_caucalifolium:2.1646E-6,(Pelargonium_candicans_1:1.992623E-4,Pelargonium_candicans_2:3.981685E-4):5.995743E-4):2.1687E-6):2.1646E-6):0.0013711561):9.087243E-4):0.0023540038,(Pelargonium_transvaalense:0.007141738,((Pelargonium_karooicum_1:2.161104E-4,Pelargonium_karooicum_2_:0.0034122375):0.0053845188,((Pelargonium_caylae:0.0034216252,Pelargonium_endlicherianum:0.0065937251):0.0015370123,((Pelargonium_spinosum:6.120771E-4,(Pelargonium_grandicalcaratum_1:0.0010609174,Pelargonium_otaviense:0.0013359316):5.273735E-4):0.0029051495,(Pelargonium_barklyi:0.0014518426,(Pelargonium_articulatum:3.974208E-4,(Pelargonium_elongatum_2:0.0034700112,(Pelargonium_plurisectum:0.0092179886,(Pelargonium_aridum:0.0019898342,(((Pelargonium_alchemilloides:9.885407E-4,Pelargonium_ranunculophyllum:9.834007E-4):7.828156E-4,(Pelargonium_peltatum:2.1646E-6,Pelargonium_saxifragoides:5.835803E-4):1.94533E-4):3.903041E-4,(Pelargonium_multibraceatum:0.0029985496,(Pelargonium_tongaense:0.0026046491,(Pelargonium_acraeum:5.892521E-4,((Pelargonium_acetosum:9.704582E-4,Pelargonium_zonale:2.1646E-6):2.1646E-6,(Pelargonium_frutetorum:2.1646E-6,Pelargonium_inquinans:0.0040020252):1.913904E-4):3.84791E-4):2.9066E-6):0.0013552572):2.6128E-6):3.838015E-4):2.3191E-6):1.735892E-4):7.888681E-4):5.342309E-4):0.0028449781):8.941905E-4):7.18695E-4):4.498602E-4):8.56985E-4):0.0059481307,((Pelargonium_minimum_1:0.007908852,((Pelargonium_grossularoides:6.830526E-4,(Pelargonium_rodneyanum:0.0050161398,(Pelargonium_australe_2:8.238835E-4,Pelargonium_littorale:2.1646E-6):0.0017170574):8.531091E-4):2.692672E-4,(Pelargonium_cotyledonis:0.0037655123,(Pelargonium_ionidiflorum:3.944613E-4,((Pelargonium_album:1.968278E-4,Pelargonium_odoratissimum:1.970516E-4):3.945498E-4,(Pelargonium_sidoides:7.418362E-4,(Pelargonium_reniforme_1:4.207374E-4,(Pelargonium_exstipulatum:0.0013498615,Pelargonium_x_fragrans_1:6.622139E-4):9.396528E-4):2.256633E-4):2.1646E-6):2.1687E-6):0.0010684706):1.729569E-4):5.370654E-4):0.0022672959,((Pelargonium_hispidum:0.0135405469,(Pelargonium_nanum:9.951967E-4,((Pelargonium_grandiflorum_2:2.1646E-6,(Pelargonium_englerianum:0.0010256116,Pelargonium_grandiflorum_1:0.0027286803):2.513839E-4):5.074714E-4,((Pelargonium_patulum:0.017389165,(Pelargonium_cucculatum:6.477852E-4,(Pelargonium_x_limoneum:3.872948E-4,(Pelargonium_capitatum:0.0017918616,Pelargonium_cordifolium:5.97113E-4):2.1646E-6):3.966628E-4):2.859515E-4):3.148161E-4,((Pelargonium_crispum_1:0.018080697,(Pelargonium_citronellum_2:0.0013237633,Pelargonium_crispum_2:2.1646E-6):0.0013863564):4.234752E-4,((Pelargonium_elegans:0.0030640984,Pelargonium_viscosissimum:0.0010814089):3.479382E-4,((Pelargonium_pseudoglutinosum_2:2.1646E-6,(Pelargonium_denticulatum_1:1.50075E-4,Pelargonium_graveolens:0.0016529222):4.74858E-5):2.1646E-6,(Pelargonium_radens:2.1646E-6,(Pelargonium_glutinosum:3.944055E-4,Pelargonium_pseudoglutinosum_1:2.1646E-6):1.50075E-4):4.73744E-5):1.825165E-4):0.0014171037):5.983514E-4):2.1709E-6):7.957601E-4):2.3652E-6):0.0012638118,(Pelargonium_alternans:0.0011419652,((Pelargonium_echinatum:0.0013331733,Pelargonium_luteolum_2:0.0077269932):6.84926E-4,(((Pelargonium_carnosum:3.95436E-4,Pelargonium_laxum:3.948189E-4):3.996772E-4,(Pelargonium_gibbosum_2:0.0013910721,(Pelargonium_crithmifolium:9.813518E-4,(Pelargonium_crassicaule:0.0026061272,(Pelargonium_triste_2:2.1646E-6,(Pelargonium_pillansii:0.0047178913,(Pelargonium_aff_lobatum:2.1687E-6,Pelargonium_lobatum_1:4.236147E-4):9.721382E-4):3.088799E-4):5.994171E-4):2.1687E-6):3.813815E-4):1.975219E-4):2.002162E-4,((Pelargonium_xerophyton:0.0115022816,(Pelargonium_klinghardtense:0.0016472078,(Pelargonium_luridum_1:0.0049074369,(Pelargonium_desertorum:6.90631E-4,(Pelargonium_luridum_2:9.043673E-4,Pelargonium_schizopetalum:0.002226065):2.6694E-6):3.003287E-4):6.274495E-4):3.528263E-4):2.1687E-6,(Pelargonium_appendiculatum:0.0016175989,((Pelargonium_hirtum_1:0.0057621394,Pelargonium_hirtum_2:2.7551E-6):0.0014046425,((Pelargonium_fulgidum_2:0.0010233587,(Pelargonium_panduriforme:2.1646E-6,Pelargonium_pulchellum:1.964841E-4):0.001171727):2.184419E-4,((Pelargonium_incrassatum:0.0026427175,(Pelargonium_undulatum_1:2.1646E-6,Pelargonium_undulatum_2:2.1646E-6):7.890023E-4):2.1687E-6,(Pelargonium_luteolum_3:0.0013484636,(Pelargonium_hirtipetalum:1.08005E-5,(Pelargonium_fissifolium:0.0014953358,((Pelargonium_auritum:0.0025760024,'Pelargonium Hoarea_329A':4.157955E-4):1.903376E-4,(Pelargonium_leipoldtii_2:7.878045E-4,((Pelargonium_pinnatum:6.08318E-4,Pelargonium_rapaceum_1:2.20082E-4):4.746802E-4,(Pelargonium_wuppertalense:5.929244E-4,(Pelargonium_aciculatum:4.893617E-4,(Pelargonium_petroselenifolium:2.060671E-4,Pelargonium_radicatum:0.0011922571):3.536004E-4):4.18076E-5):2.1646E-6):2.02408E-4):8.026609E-4):1.994802E-4):5.79067E-4):1.925447E-4):1.955346E-4):2.029605E-4):1.964433E-4):3.885123E-4):0.0012249657):1.977792E-4):2.237893E-4):3.765557E-4):0.001597836):0.0029821744):0.0035408133):0.03576877685):0.0; [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr117181] END;