#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 21, 2024; 1:00 GMT

TreeBASE (cc) 1994-2008

Study reference:
Ivors K., Hayden K., Bonants P., Rizzo D., & Garbelotto M. 2004. AFLP and phylogenetic
analyses of North American and European populations of Phytophthora ramorum.
Molecular Ecology, null.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S1129]

BEGIN TAXA;
        TITLE  one_of_24_SMP_trees;
        DIMENSIONS NTAX=49;
        TAXLABELS
            Peronophythora_litchii
            Phytophthora_arecae
            Phytophthora_boehmeriae
            Phytophthora_cactorum_385
            Phytophthora_cactorum_SB2079
            Phytophthora_cambivora
            Phytophthora_capsici_302
            Phytophthora_capsici_P141
            Phytophthora_cinnamomi_Cn.2_A2
            Phytophthora_cinnamomi_P6379_A1
            Phytophthora_citricola
            Phytophthora_colocasiae
            Phytophthora_cryptogea
            Phytophthora_drechsleri_301
            Phytophthora_drechsleri_ATCC
            Phytophthora_erythroseptica_355
            Phytophthora_erythroseptica_IMI34684
            Phytophthora_fragariae_ATCC13973
            Phytophthora_fragariae_rubi
            Phytophthora_gonapodyides
            Phytophthora_heveae
            Phytophthora_hibernalis_ATCC_379
            Phytophthora_hibernalis_ATCC_380
            Phytophthora_ilicis_4175a
            Phytophthora_ilicis_ATCC_56615
            Phytophthora_infestans_176
            Phytophthora_infestans_WV4
            Phytophthora_lateralis_PL27
            Phytophthora_lateralis_PL33
            Phytophthora_megakarya_327
            Phytophthora_megakarya_328
            Phytophthora_megasperma_309
            Phytophthora_megasperma_695T
            Phytophthora_mirabilis
            Phytophthora_nemorosa
            Phytophthora_nicotianae_331
            Phytophthora_nicotianae_332
            Phytophthora_palmivora_P1.10
            Phytophthora_palmivora_P1.14
            Phytophthora_phaseoli
            Phytophthora_pseudosyringae_IFBPSEU16_Germany
            Phytophthora_pseudosyringae_P40_US
            Phytophthora_pseudotsugae
            Phytophthora_ramorum_BBA12.98_Germany
            Phytophthora_ramorum_Pr102_US
            Phytophthora_sojae_312
            Phytophthora_syringae_IMI296829
            Phytophthora_syringae_PDR115773A
            Pythium_aphanidermatum
            ;
END;

BEGIN TREES;
      TITLE Tb6809;
      LINK TAXA = one_of_24_SMP_trees;
      TREE Fig._3 = [&R] (Phytophthora_nemorosa,(((Phytophthora_pseudosyringae_P40_US,Phytophthora_pseudosyringae_IFBPSEU16_Germany),(Phytophthora_ilicis_ATCC_56615,Phytophthora_ilicis_4175a)),(((((((Phytophthora_arecae,Phytophthora_palmivora_P1.14,Phytophthora_palmivora_P1.10),Peronophythora_litchii),((((((Phytophthora_phaseoli,Phytophthora_mirabilis),(Phytophthora_infestans_WV4,Phytophthora_infestans_176)),(Phytophthora_pseudotsugae,(Phytophthora_cactorum_SB2079,Phytophthora_cactorum_385))),(((Phytophthora_ramorum_Pr102_US,Phytophthora_ramorum_BBA12.98_Germany),(Phytophthora_hibernalis_ATCC_380,Phytophthora_hibernalis_ATCC_379)),(Phytophthora_lateralis_PL27,Phytophthora_lateralis_PL33))),((Phytophthora_cinnamomi_P6379_A1,Phytophthora_cinnamomi_Cn.2_A2),(((Phytophthora_cambivora,Phytophthora_fragariae_rubi),Phytophthora_fragariae_ATCC13973),Phytophthora_sojae_312))),(Phytophthora_boehmeriae,Phytophthora_heveae))),(Phytophthora_megakarya_327,Phytophthora_megakarya_328)),(((Phytophthora_capsici_302,Phytophthora_capsici_P141),Phytophthora_colocasiae),Phytophthora_citricola)),(((Phytophthora_nicotianae_332,Phytophthora_nicotianae_331),Pythium_aphanidermatum),((((Phytophthora_cryptogea,Phytophthora_erythroseptica_IMI34684),Phytophthora_erythroseptica_355),(Phytophthora_drechsleri_301,Phytophthora_drechsleri_ATCC)),(Phytophthora_syringae_PDR115773A,Phytophthora_syringae_IMI296829)))),(Phytophthora_gonapodyides,(Phytophthora_megasperma_695T,Phytophthora_megasperma_309)))));
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr1754]


END;