#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 15, 2024; 20:11 GMT TreeBASE (cc) 1994-2008 Study reference: Casewell N.R., Wagstaff S.C., Harrison R.A., & Wuster W. 2010. Gene tree parsimony of multi-locus snake venom protein families reveals species tree conflict as a result of multiple parallel gene loss. Molecular Biology and Evolution, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S10791] BEGIN TAXA; TITLE Echis; DIMENSIONS NTAX=32; TAXLABELS Echis_carinatus_sochureki_07B03_ECS00244 Echis_carinatus_sochureki_09A02_ECS00105 Echis_carinatus_sochureki_11A11_ECS00134 Echis_carinatus_sochureki_11F09_ECS00186 Echis_coloratus_01C11_ECO00042 Echis_coloratus_01G12_ECO00013 Echis_coloratus_02H04_ECO00013 Echis_coloratus_03A12_ECO00135 Echis_coloratus_03G08_ECO00112 Echis_coloratus_04E01_ECO00164 Echis_coloratus_04E05_ECO00161 Echis_coloratus_05D01_ECO00206 Echis_coloratus_05H12_ECO00182 Echis_coloratus_07B03_ECO00285 Echis_coloratus_08A11_ECO00182 Echis_coloratus_11A06_ECO00285 Echis_coloratus_13E06_ECO00285 Echis_coloratus_13F10_ECO00419 Echis_coloratus_15H05_ECO00285 Echis_ocellatus_02E07_EOC00185 Echis_ocellatus_02F07_EOC00181 Echis_ocellatus_03E02_EOC00049 Echis_ocellatus_05B06_EOC00049 Echis_ocellatus_06E11_EOC00049 Echis_ocellatus_10B04_EOC00315 Echis_pyramidum_leakeyi_02A01_EPL00089 Echis_pyramidum_leakeyi_03A08_EPL00141 Echis_pyramidum_leakeyi_03E06_EPL00089 Echis_pyramidum_leakeyi_03H09_EPL00098 Echis_pyramidum_leakeyi_13A12_EPL00502 Echis_pyramidum_leakeyi_13B07_EPL00435 Homo_sapiens_13897994 ; END; BEGIN TREES; TITLE Echis_serine_protease_DNA_TB; LINK TAXA = Echis; TREE serine_protease_DNA = [&R] (Homo_sapiens_13897994:2.230847,((((((((Echis_coloratus_11A06_ECO00285:0.005396,Echis_coloratus_07B03_ECO00285:0.001341)0.35:0.001469,(Echis_coloratus_13E06_ECO00285:0.001352,Echis_coloratus_15H05_ECO00285:0.002698)0.96:0.002637)1.00:0.026683,(Echis_ocellatus_02F07_EOC00181:0.002566,Echis_ocellatus_02E07_EOC00185:0.080257)0.98:0.031488)0.95:0.019935,Echis_carinatus_sochureki_11F09_ECS00186:0.025994)0.92:0.057383,(Echis_coloratus_05D01_ECO00206:0.016341,Echis_carinatus_sochureki_09A02_ECS00105:0.014348)1.00:0.141909)0.69:0.022223,Echis_coloratus_01C11_ECO00042:0.097391)0.36:0.010639,(Echis_coloratus_01G12_ECO00013:0.00266,Echis_coloratus_02H04_ECO00013:0.006171)1.00:0.13145)0.39:0.01566,Echis_coloratus_03G08_ECO00112:0.09257)0.54:0.027364,((((((Echis_pyramidum_leakeyi_03E06_EPL00089:0.0034,(Echis_pyramidum_leakeyi_02A01_EPL00089:0.003031,Echis_pyramidum_leakeyi_13B07_EPL00435:0.001475)0.38:0.001649)0.99:0.012773,Echis_coloratus_13F10_ECO00419:0.010601)0.98:0.020866,Echis_carinatus_sochureki_11A11_ECS00134:0.028888)0.96:0.080261,((((Echis_coloratus_08A11_ECO00182:0.004324,Echis_coloratus_05H12_ECO00182:0.00148)1.00:0.046651,((Echis_ocellatus_06E11_EOC00049:0.006318,Echis_ocellatus_03E02_EOC00049:0.001365)0.99:0.004011,Echis_ocellatus_05B06_EOC00049:0.001543)1.00:0.070176)0.99:0.02505,(Echis_ocellatus_10B04_EOC00315:0.033448,(Echis_pyramidum_leakeyi_03A08_EPL00141:0.007849,Echis_pyramidum_leakeyi_13A12_EPL00502:0.002378)1.00:0.024158)1.00:0.080439)0.55:0.015627,Echis_coloratus_03A12_ECO00135:0.085394)0.60:0.015447)0.79:0.018652,Echis_carinatus_sochureki_07B03_ECS00244:0.131562)0.58:0.02191,((Echis_coloratus_04E01_ECO00164:0.001498,Echis_coloratus_04E05_ECO00161:0.008489)0.90:0.004535,Echis_pyramidum_leakeyi_03H09_EPL00098:0.016086)0.96:0.085471)0.47:0.027604); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr21121] END;