#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on April 25, 2024; 12:28 GMT

TreeBASE (cc) 1994-2008

Study reference:
Du M., Schardl C.L., Nuckles E., & Vaillancourt L. 2005. Using Mating-Type Gene Sequences
for Improved Phylogenetic Resolution of Colletotrichum Species Complexes.
Mycologia, 97: 641-658.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S1356]

BEGIN TAXA;
        TITLE  ITS_ML;
        DIMENSIONS NTAX=52;
        TAXLABELS
            Colletotrichum_acutatum_1.4.51
            Colletotrichum_acutatum_2.7.15
            Colletotrichum_acutatum_216
            Colletotrichum_acutatum_5.7.52
            'Colletotrichum acutatum ALM-4US'
            'Colletotrichum acutatum ALM-9US'
            'Colletotrichum acutatum ALM-BZR-9A'
            'Colletotrichum acutatum ALM-IKS-7Q'
            'Colletotrichum acutatum ALM-KSH-10'
            'Colletotrichum acutatum ALM-NRB-30K'
            'Colletotrichum acutatum ANE-25A'
            'Colletotrichum acutatum ANE-27A'
            'Colletotrichum acutatum ANE-4'
            'Colletotrichum acutatum ANE-NL12'
            Colletotrichum_acutatum_APPY3
            'Colletotrichum acutatum Mil-1'
            Colletotrichum_acutatum_TUT137A
            Colletotrichum_acutatum_TUT5954
            Colletotrichum_coccodes
            'Colletotrichum fragariae CF-63'
            'Colletotrichum fragariae CF-75'
            Colletotrichum_gloeosporioides_1362
            Colletotrichum_gloeosporioides_2489
            Colletotrichum_gloeosporioides_366C
            'Colletotrichum gloeosporioides 38-1D'
            Colletotrichum_gloeosporioides_APPR1
            Colletotrichum_gloeosporioides_APPY8
            'Colletotrichum gloeosporioides AVO-374B'
            'Colletotrichum gloeosporioides AVO-6'
            'Colletotrichum gloeosporioides ArkP-1'
            'Colletotrichum gloeosporioides CG-162'
            Colletotrichum_gloeosporioides_Castigo3
            Colletotrichum_gloeosporioides_FA16
            Colletotrichum_gloeosporioides_NC329
            Colletotrichum_graminicola_99365
            Colletotrichum_graminicola_99369
            Colletotrichum_graminicola_99375
            Colletotrichum_graminicola_BG1.001
            Colletotrichum_graminicola_Cg104
            Colletotrichum_graminicola_CgAurora
            Colletotrichum_graminicola_KY1
            Colletotrichum_graminicola_M1.001
            Colletotrichum_graminicola_M5.001
            Colletotrichum_graminicola_OG1.001
            Colletotrichum_graminicola_RG1.001
            Colletotrichum_magna
            Colletotrichum_musae
            Colletotrichum_sublineolum_JG1.001
            Colletotrichum_sublineolum_S17.001
            Colletotrichum_sublineolum_S3.001
            Colletotrichum_sublineolum_S7.001
            Colletotrichum_sublineolum_W1.001
            ;
END;

BEGIN TREES;
      TITLE Tb7314;
      LINK TAXA = ITS_ML;
      TREE Fig._5 = [&R] (Colletotrichum_coccodes,(((Colletotrichum_graminicola_OG1.001,(Colletotrichum_graminicola_99365,Colletotrichum_graminicola_99369,Colletotrichum_graminicola_RG1.001,Colletotrichum_graminicola_99375))Colletotrichum_sp._A,(((Colletotrichum_gloeosporioides_366C,'Colletotrichum gloeosporioides AVO-6',Colletotrichum_gloeosporioides_NC329,'Colletotrichum gloeosporioides AVO-374B',(Colletotrichum_gloeosporioides_1362,Colletotrichum_gloeosporioides_Castigo3),Colletotrichum_gloeosporioides_FA16,'Colletotrichum gloeosporioides ArkP-1','Colletotrichum fragariae CF-63','Colletotrichum fragariae CF-75',Colletotrichum_musae,Colletotrichum_gloeosporioides_2489,Colletotrichum_gloeosporioides_APPR1,'Colletotrichum gloeosporioides 38-1D',Colletotrichum_gloeosporioides_APPY8,'Colletotrichum gloeosporioides CG-162')Colletotrichum_gloeosporioides,(Colletotrichum_graminicola_Cg104,Colletotrichum_graminicola_KY1,Colletotrichum_graminicola_M1.001,Colletotrichum_graminicola_M5.001,Colletotrichum_graminicola_CgAurora)Colletotrichum_graminicola,(Colletotrichum_sublineolum_JG1.001,Colletotrichum_sublineolum_S3.001,Colletotrichum_sublineolum_W1.001,Colletotrichum_sublineolum_S17.001,Colletotrichum_sublineolum_S7.001)Colletotrichum_sublineolum),Colletotrichum_graminicola_BG1.001)),((('Colletotrichum acutatum ALM-4US',('Colletotrichum acutatum ALM-KSH-10','Colletotrichum acutatum ALM-IKS-7Q','Colletotrichum acutatum ALM-BZR-9A','Colletotrichum acutatum ALM-NRB-30K'),Colletotrichum_acutatum_5.7.52,Colletotrichum_acutatum_1.4.51,Colletotrichum_acutatum_2.7.15,Colletotrichum_acutatum_APPY3,'Colletotrichum acutatum ANE-4','Colletotrichum acutatum ANE-NL12'),(Colletotrichum_acutatum_TUT5954,Colletotrichum_acutatum_216,'Colletotrichum acutatum ALM-9US','Colletotrichum acutatum Mil-1',Colletotrichum_acutatum_TUT137A,'Colletotrichum acutatum ANE-27A','Colletotrichum acutatum ANE-25A'))Colletotrichum_acutatum,Colletotrichum_magna)));
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr2304]


END;