#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 16, 2024; 2:32 GMT TreeBASE (cc) 1994-2008 Study reference: Collins A., Schuchert P., Marques A., Jankowski T., Medina M., & Schierwater B. 2005. Medusozoan phylogeny and character evolution clarified by new large and small subunit rDNA data and an assessment of the utility of phylogenetic mixture models. Systematic Biology, 55(1): 97-115. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S1448] BEGIN TAXA; TITLE SSU_MP; DIMENSIONS NTAX=121; TAXLABELS Acabaria_habereri Acalycigorgia_inermis Actinia_equina Aegina_citrea Aequorea_victoria Aglauropsis_aeora Anthopleura_midori Antipathes_galapagensis Astrangia_danae Atolla_vanhoeffeni Aurelia_aurita 'Aurelia sp-AGC-2005' Bathypathes_sp Blackfordia_virginica 'Bougainvillia sp-AGC-2001' Briareum_asbestinum Candelabrum_cocksii Carukia_barnesi Carybdea_marsupialis Carybdea_rastonii Carybdea_sivickisi 'Carybdea sp-2-AGC-2005' 'Carybdea xaymacana-AUS' 'Carybdea xaymacana-PAN' Cassiopea_xamachana 'Catostylus sp-AGC-2001' Ceratotrochus_magnaghii Ceriantheopsis_americana Cerianthus_borealis Cerianthus_filiformis Chironex_fleckeri 'Chiropsalmus sp-AGC-2001' Chlorohydra_viridissima Chrysaora_melanaster 'Chrysaora sp-AGC-2005' Cirripathes_lutkeni Cladonema_californicum 'Clytia sp-AGC-2001' Corallium_kishinouyei Corymorpha_intermedia Corynactis_californica Corynactis_sp Coryne_muscoides Coryne_pusilla Cotylorhiza_tuberculata Craspedacusta_sowerbyi_USA Craterolophus_convolvulus Crossota_rufobrunnea Cunina_frugifera 'Cyanea sp-AGC-2001' Dactylanthus_antarcticus 'Darwin carybdeid-AGC-2001' Depastromorpha_africana Discosoma_sp Ectopleura_larynx Edwardsia_gilbertensis Eudendrium_racemosum Fabienna_sphaerica Flosmaris_mutsuensis Fungia_scutaria 'Garveia sp-CC-2005' Gymnangium_hians Haliclystus_octoradiatus Haliclystus_sanjuanensis Haliscera_conica Hippopodius_hippopus Hydra_circumcincta Hydra_littoralis Hydractinia_echinata Hydractinia_serrata Javania_insignis Junceella_racemosa Limnocnida_tanganyicae Liriope_tetraphylla_PAN Lucernaria_janetae Maeotias_marginata 'Melicertissa sp-AGC-2001' Melicertum_octocostatum 'Millepora sp-AGC-2001' 'Moerisia sp-AGC-2001' Monobrachium_parasiticum Montastraea_franksi Nanomia_bijuga Nausithoe_rubra 'Nectopyramis sp-AGC-2001' Obelia_sp Olindias_phosphorica Orstomisis_crosnieri Pachycerianthus_fimbriatus Palythoa_variabilis 'Pandea sp-AGC-2005' Pantachogon_haeckeli Paracondylactis_hertwigi Parazoanthus_axinellae Parazoanthus_sp Pennaria_disticha Phacellophora_camtschatica Physalia_physalis Physalia_utriculus Physophora_hydrostatica Podocoryne_carnea Polyorchis_penicillatus 'Porpita sp-AGC-2001' Proboscidactyla_flavicirrata Pseudocladochonus_hicksoni Renilla_reniformis 'Rhizostome sp-AGC-2005' Scrippsia_pacifica Selaginopsis_cornigera Solanderia_secunda Solmissus_marshalli Sphaeronectes_gracilis Staurocladia_wellingtoni Stichopathes_spiessi Stomolophus_meleagris Taiaroa_tauhou Telestula_sp Tiaropsidium_kelseyi Tripedalia_cystophora Tubipora_musica Xenia_sp ; END; BEGIN TREES; TITLE Tb7573; LINK TAXA = SSU_MP; TREE Fig._3 = [&R] ((((((((Aequorea_victoria,Blackfordia_virginica),Tiaropsidium_kelseyi),'Clytia sp-AGC-2001'),Obelia_sp),(Selaginopsis_cornigera,Gymnangium_hians),Melicertum_octocostatum,'Melicertissa sp-AGC-2001',(((Hydra_circumcincta,Hydra_littoralis),Chlorohydra_viridissima),Candelabrum_cocksii,Corymorpha_intermedia,Ectopleura_larynx),(((('Nectopyramis sp-AGC-2001',Hippopodius_hippopus,Sphaeronectes_gracilis),Physophora_hydrostatica),Nanomia_bijuga),(Physalia_physalis,Physalia_utriculus)),((Scrippsia_pacifica,Polyorchis_penicillatus),(Coryne_pusilla,Coryne_muscoides)),('Millepora sp-AGC-2001','Porpita sp-AGC-2001',Solanderia_secunda),(Staurocladia_wellingtoni,Cladonema_californicum),Pennaria_disticha,'Moerisia sp-AGC-2001',(Hydractinia_echinata,Hydractinia_serrata,Podocoryne_carnea),(Proboscidactyla_flavicirrata,Fabienna_sphaerica),'Pandea sp-AGC-2005','Garveia sp-CC-2005',Eudendrium_racemosum,'Bougainvillia sp-AGC-2001'),((((Aegina_citrea,Solmissus_marshalli),Cunina_frugifera),(Pantachogon_haeckeli,Haliscera_conica)),Monobrachium_parasiticum,(Olindias_phosphorica,Liriope_tetraphylla_PAN),(Aglauropsis_aeora,(Maeotias_marginata,(Craspedacusta_sowerbyi_USA,Limnocnida_tanganyicae))),Crossota_rufobrunnea)),(Craterolophus_convolvulus,(Lucernaria_janetae,(Haliclystus_octoradiatus,(Haliclystus_sanjuanensis,Depastromorpha_africana)))),(((Carukia_barnesi,'Darwin carybdeid-AGC-2001'),(Tripedalia_cystophora,Carybdea_sivickisi),Carybdea_marsupialis,(Carybdea_rastonii,('Carybdea sp-2-AGC-2005','Carybdea xaymacana-PAN'),'Carybdea xaymacana-AUS')),('Chiropsalmus sp-AGC-2001',Chironex_fleckeri)),((Nausithoe_rubra,Atolla_vanhoeffeni),(('Cyanea sp-AGC-2001',((Aurelia_aurita,'Aurelia sp-AGC-2005'),Phacellophora_camtschatica,(('Catostylus sp-AGC-2001',Stomolophus_meleagris),Cassiopea_xamachana,'Rhizostome sp-AGC-2005',Cotylorhiza_tuberculata))),(Chrysaora_melanaster,'Chrysaora sp-AGC-2005')))),((Cerianthus_filiformis,((Cerianthus_borealis,Ceriantheopsis_americana),Pachycerianthus_fimbriatus)),((Palythoa_variabilis,(Parazoanthus_sp,Parazoanthus_axinellae)),((Discosoma_sp,(Montastraea_franksi,((Javania_insignis,Ceratotrochus_magnaghii),Astrangia_danae,Fungia_scutaria))),(Corynactis_sp,Corynactis_californica)),((Edwardsia_gilbertensis,Flosmaris_mutsuensis),((Anthopleura_midori,Paracondylactis_hertwigi),Dactylanthus_antarcticus,Actinia_equina)),(((Antipathes_galapagensis,Bathypathes_sp),Stichopathes_spiessi),Cirripathes_lutkeni)),((((((Tubipora_musica,Taiaroa_tauhou),Pseudocladochonus_hicksoni),Acalycigorgia_inermis),Acabaria_habereri),Xenia_sp),(Briareum_asbestinum,((Junceella_racemosa,((Orstomisis_crosnieri,Corallium_kishinouyei),Telestula_sp)),Renilla_reniformis))))); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr2313] END;