#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 15, 2024; 19:21 GMT

TreeBASE (cc) 1994-2008

Study reference:
Poux C., Chevret P., Huchon D., Jong W., & Douzery E. 2006. Arrival and diversification
of caviomorph rodents and platyrrhine primates in South America. Systematic
Biology, 55(2): 228-244.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S1453]

BEGIN TAXA;
        TITLE  Combined_markers;
        DIMENSIONS NTAX=62;
        TAXLABELS
            Agouti_paca
            Anomalurus_sp.
            Aplodontia_rufa
            Ateles_sp.
            Bathyergus_suillus
            Bos_taurus
            Bradypus_tridactylus
            Callithrix_jacchus
            Castor_canadensis
            Cavia_porcellus
            Cebus_apella
            Ceratomorpha
            Cercopithecus_solatus
            Chinchilla_lanigera
            Cynocephalus_variegatus
            Cynopterus_sphinx
            Didelphis_sp.
            Dinomys_branickii
            Dipodomys_merriami
            Dipus_sagitta
            Dryomys_nitedula
            Dugong_dugon
            Echimys_chrysurus
            Elephantidae
            Equus_sp.
            Erethizon_dorsatum
            Erinaceus_europaeus
            Felis_catus
            Glis_glis
            Hippopotamus_amphibius
            Homo_sapiens
            Hylobates_lar
            Lama_sp.
            Lemur_catta
            Lepus_crawshayi
            Macaca_mulatta
            Macropus_sp.
            Manis_sp.
            Marmota_monax
            Massoutiera_mzabi
            Megaderma_lyra
            Microcebus_murinus
            Mus_musculus
            Nycticebus_coucang
            Ochotona_princeps
            Octodon_lunatus
            Orycteropus_afer
            Oryctolagus_cuniculus
            Petromus_typicus
            Physeter_catodon
            Pithecia_pithecia
            Procavia_capensis
            Propithecus_verreauxi
            Rattus_norvegicus
            Sus_scrofa
            Tachyoryctes_sp.
            Tarsius_bancanus
            Thomomys_talpoides
            Thryonomys_swinderianus
            Tonatia_bidens
            Trichys_fasciculata
            Tupaia_sp.
            ;
END;

BEGIN TREES;
      TITLE Tb7586;
      LINK TAXA = Combined_markers;
      TREE Fig.1 = [&R] (Didelphis_sp.,((((((Erinaceus_europaeus,(((Bos_taurus,(Hippopotamus_amphibius,Physeter_catodon)),Sus_scrofa),Lama_sp.)),((Felis_catus,Manis_sp.),(Equus_sp.,Ceratomorpha))),((Cynopterus_sphinx,Megaderma_lyra),Tonatia_bidens)),(((Nycticebus_coucang,((Microcebus_murinus,Propithecus_verreauxi),Lemur_catta)),(Tarsius_bancanus,((((Callithrix_jacchus,Cebus_apella),Pithecia_pithecia),Ateles_sp.),((Cercopithecus_solatus,Macaca_mulatta),(Hylobates_lar,Homo_sapiens))))),((Tupaia_sp.,Cynocephalus_variegatus),(((Lepus_crawshayi,Oryctolagus_cuniculus),Ochotona_princeps),(((Marmota_monax,Aplodontia_rufa),(Dryomys_nitedula,Glis_glis)),(((Castor_canadensis,(Dipodomys_merriami,Thomomys_talpoides)),(Anomalurus_sp.,(Dipus_sagitta,((Mus_musculus,Rattus_norvegicus),Tachyoryctes_sp.)))),(Massoutiera_mzabi,(Trichys_fasciculata,((Bathyergus_suillus,(Thryonomys_swinderianus,Petromus_typicus)),((Erethizon_dorsatum,(Cavia_porcellus,Agouti_paca)),((Chinchilla_lanigera,Dinomys_branickii),(Echimys_chrysurus,Octodon_lunatus)))))))))))),Bradypus_tridactylus),(((Dugong_dugon,Procavia_capensis),Elephantidae),Orycteropus_afer)),Macropus_sp.);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr2328]


END;