#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 15, 2024; 19:40 GMT

TreeBASE (cc) 1994-2008

Study reference:
Bowers J., Martin F., Tooley P., & Luz E. 2006. Genetic and morphological diversity
of temperate and tropical isolates of Phytophthora capsici. Phytopathology, null.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S1700]

BEGIN TAXA;
        TITLE  ITS;
        DIMENSIONS NTAX=71;
        TAXLABELS
            Phytophthora_capsici
            Phytophthora_capsici_21170
            Phytophthora_capsici_219RU
            Phytophthora_capsici_220RU
            Phytophthora_capsici_223RU
            Phytophthora_capsici_224RU
            Phytophthora_capsici_230RU
            Phytophthora_capsici_23NC
            Phytophthora_capsici_AJ854284
            Phytophthora_capsici_AJ854285
            Phytophthora_capsici_AJ854286
            Phytophthora_capsici_AJ854287
            Phytophthora_capsici_AY251662
            Phytophthora_capsici_AY423292
            Phytophthora_capsici_AY726623
            Phytophthora_capsici_AY742735
            Phytophthora_capsici_AY742736
            Phytophthora_capsici_B2HH4
            Phytophthora_capsici_CBS128.23
            'Phytophthora capsici Cp-16'
            'Phytophthora capsici Cp-17'
            'Phytophthora capsici Cp-30'
            'Phytophthora capsici Cp-32'
            'Phytophthora capsici Cp-D1'
            'Phytophthora capsici Cp-D2'
            'Phytophthora capsici Cp-D3'
            Phytophthora_capsici_DQ069293
            Phytophthora_capsici_H210
            Phytophthora_capsici_H599
            Phytophthora_capsici_IMI352321
            Phytophthora_capsici_KACC40157
            Phytophthora_capsici_KACC40177
            Phytophthora_capsici_R1098
            Phytophthora_capsici_R1099
            Phytophthora_capsici_R1198
            Phytophthora_capsici_R1298
            Phytophthora_capsici_R198
            Phytophthora_capsici_R499
            Phytophthora_capsici_R599
            Phytophthora_capsici_R699
            Phytophthora_capsici_R899
            Phytophthora_capsici_R998
            Phytophthora_capsici_RA16
            Phytophthora_capsici_RA4
            Phytophthora_citricola
            Phytophthora_colocasiae
            Phytophthora_gonapodyides
            Phytophthora_infestans
            Phytophthora_megakarya
            Phytophthora_megasperma
            Phytophthora_palmivora
            Phytophthora_tropicalis_066
            Phytophthora_tropicalis_182E
            Phytophthora_tropicalis_183E
            Phytophthora_tropicalis_185E
            Phytophthora_tropicalis_197E
            Phytophthora_tropicalis_1E
            Phytophthora_tropicalis_215E
            Phytophthora_tropicalis_23E
            Phytophthora_tropicalis_4E
            Phytophthora_tropicalis_59Ea
            Phytophthora_tropicalis_CBS434.91
            'Phytophthora tropicalis Cp-1'
            'Phytophthora tropicalis Cp-2'
            'Phytophthora tropicalis Cp-In'
            Phytophthora_tropicalis_H213
            Phytophthora_tropicalis_H352
            Phytophthora_tropicalis_H778
            Phytophthora_tropicalis_IMI304412
            Phytophthora_tropicalis_IMI325900
            Phytophthora_tropicalis_IND44
            ;
END;

BEGIN TREES;
      TITLE Tb8138;
      LINK TAXA = ITS;
      TREE Fig._2 = [&R] (Phytophthora_citricola,((Phytophthora_colocasiae,((((((Phytophthora_capsici,Phytophthora_capsici_IMI352321,Phytophthora_capsici_KACC40177),(Phytophthora_capsici_219RU,((Phytophthora_capsici_R1198,Phytophthora_capsici_R899,Phytophthora_capsici_230RU,'Phytophthora capsici Cp-D1',Phytophthora_capsici_H599,Phytophthora_capsici_224RU,'Phytophthora capsici Cp-D2',Phytophthora_capsici_H210,'Phytophthora capsici Cp-32','Phytophthora capsici Cp-D3',Phytophthora_capsici_R198,Phytophthora_capsici_21170,Phytophthora_capsici_R1098,Phytophthora_capsici_R1099,Phytophthora_capsici_R998,Phytophthora_capsici_23NC,Phytophthora_capsici_B2HH4,Phytophthora_capsici_R1298,Phytophthora_capsici_R699,'Phytophthora capsici Cp-17',Phytophthora_capsici_RA16,Phytophthora_capsici_RA4,'Phytophthora capsici Cp-16',Phytophthora_capsici_220RU,'Phytophthora capsici Cp-30',Phytophthora_capsici_R499,(Phytophthora_capsici_AY251662,(Phytophthora_capsici_AY742735,Phytophthora_capsici_AY742736),Phytophthora_capsici_DQ069293,Phytophthora_capsici_AY423292),Phytophthora_capsici_AJ854286,Phytophthora_capsici_AJ854287),Phytophthora_capsici_223RU,Phytophthora_capsici_CBS128.23,Phytophthora_capsici_AY726623,Phytophthora_capsici_AJ854285,Phytophthora_capsici_AJ854284))),Phytophthora_capsici_KACC40157),Phytophthora_capsici_R599),((Phytophthora_tropicalis_1E,Phytophthora_tropicalis_4E),(Phytophthora_tropicalis_23E,Phytophthora_tropicalis_59Ea),'Phytophthora tropicalis Cp-1',(Phytophthora_tropicalis_IMI325900,Phytophthora_tropicalis_IMI304412),Phytophthora_tropicalis_H352)),((Phytophthora_tropicalis_182E,Phytophthora_tropicalis_185E,Phytophthora_tropicalis_197E,Phytophthora_tropicalis_215E,Phytophthora_tropicalis_183E,Phytophthora_tropicalis_H213,Phytophthora_tropicalis_IND44),('Phytophthora tropicalis Cp-In',Phytophthora_tropicalis_H778,Phytophthora_tropicalis_CBS434.91,('Phytophthora tropicalis Cp-2',Phytophthora_tropicalis_066))))),(((Phytophthora_gonapodyides,Phytophthora_megasperma),(Phytophthora_megakarya,Phytophthora_palmivora)),Phytophthora_infestans)));
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr2639]


END;