#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 15, 2024; 20:47 GMT

TreeBASE (cc) 1994-2008

Study reference:
Bowers J., Martin F., Tooley P., & Luz E. 2006. Genetic and morphological diversity
of temperate and tropical isolates of Phytophthora capsici. Phytopathology, null.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S1700]

BEGIN TAXA;
        TITLE  ITS;
        DIMENSIONS NTAX=44;
        TAXLABELS
            Phytophthora_arecae
            Phytophthora_cactorum
            Phytophthora_capsici
            Phytophthora_capsici_220RU
            Phytophthora_capsici_B2HH4
            Phytophthora_capsici_CBS128.23
            'Phytophthora capsici Cp-D2'
            'Phytophthora capsici Cp-D3'
            Phytophthora_capsici_R1198
            Phytophthora_capsici_R1298
            Phytophthora_capsici_R699
            Phytophthora_capsici_RA16
            Phytophthora_capsici_RA4
            Phytophthora_cinnamomi
            Phytophthora_citricola
            Phytophthora_colocasiae
            Phytophthora_cryptogea
            Phytophthora_drechsleri
            Phytophthora_erythroseptica
            Phytophthora_fragariae
            Phytophthora_fragariae_rubi
            Phytophthora_gonapodyides
            Phytophthora_heveae
            Phytophthora_hibernalis
            Phytophthora_ilicis
            Phytophthora_infestans
            Phytophthora_lateralis
            Phytophthora_megakarya
            Phytophthora_megasperma
            Phytophthora_mirabilis
            Phytophthora_nicotianae
            Phytophthora_palmivora
            Phytophthora_phaseoli
            Phytophthora_pseudotsugae
            Phytophthora_sojae
            Phytophthora_syringae
            Phytophthora_tropicalis_197E
            Phytophthora_tropicalis_215E
            Phytophthora_tropicalis_59Ea
            Phytophthora_tropicalis_CBS434.91
            'Phytophthora tropicalis Cp-1'
            'Phytophthora tropicalis Cp-2'
            'Phytophthora tropicalis Cp-In'
            Pythium_aphanidermatum
            ;
END;

BEGIN TREES;
      TITLE Tb8139;
      LINK TAXA = ITS;
      TREE Fig._3 = [&R] (Pythium_aphanidermatum,(((Phytophthora_arecae,Phytophthora_palmivora),Phytophthora_megakarya),((Phytophthora_cactorum,Phytophthora_pseudotsugae),(((Phytophthora_infestans,Phytophthora_mirabilis),Phytophthora_phaseoli),Phytophthora_nicotianae)),(((Phytophthora_cinnamomi,((Phytophthora_fragariae,Phytophthora_fragariae_rubi),Phytophthora_sojae)),((((Phytophthora_cryptogea,Phytophthora_erythroseptica),Phytophthora_drechsleri),Phytophthora_syringae),(Phytophthora_hibernalis,Phytophthora_lateralis))),(Phytophthora_gonapodyides,Phytophthora_megasperma)),(Phytophthora_citricola,(Phytophthora_colocasiae,(((Phytophthora_capsici,((Phytophthora_capsici_R1198,'Phytophthora capsici Cp-D2','Phytophthora capsici Cp-D3',Phytophthora_capsici_B2HH4,Phytophthora_capsici_R1298,Phytophthora_capsici_R699,Phytophthora_capsici_RA16,Phytophthora_capsici_RA4,Phytophthora_capsici_220RU),Phytophthora_capsici_CBS128.23)),(Phytophthora_tropicalis_59Ea,'Phytophthora tropicalis Cp-1')),((Phytophthora_tropicalis_197E,Phytophthora_tropicalis_215E),('Phytophthora tropicalis Cp-In',Phytophthora_tropicalis_CBS434.91,'Phytophthora tropicalis Cp-2'))))),Phytophthora_heveae,Phytophthora_ilicis));
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr2640]


END;