#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 16, 2024; 3:14 GMT TreeBASE (cc) 1994-2008 Study reference: Bowers J., Martin F., Tooley P., & Luz E. 2006. Genetic and morphological diversity of temperate and tropical isolates of Phytophthora capsici. Phytopathology, null. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S1700] BEGIN TAXA; TITLE COX2; DIMENSIONS NTAX=72; TAXLABELS Phytophthora_arecea Phytophthora_boehemeriae Phytophthora_cactorum_California Phytophthora_cactorum_New_York Phytophthora_cactorum_Washington Phytophthora_capsici_197E Phytophthora_capsici_215E Phytophthora_capsici_220 Phytophthora_capsici_302 Phytophthora_capsici_59E Phytophthora_capsici_B2HH4 Phytophthora_capsici_CBS_128.23 'Phytophthora capsici Cp-1' 'Phytophthora capsici Cp-2' 'Phytophthora capsici Cp-D2' 'Phytophthora capsici Cp-D3' 'Phytophthora capsici Cp-In' Phytophthora_capsici_R1198 Phytophthora_capsici_R1298 Phytophthora_capsici_R699 Phytophthora_capsici_RA1 Phytophthora_capsici_RA4 Phytophthora_cinnamomi Phytophthora_citricola_California Phytophthora_citricola_Florida Phytophthora_colocasiae_China Phytophthora_colocasiae_India Phytophthora_colocasiae_Indonesia Phytophthora_cryptogea Phytophthora_drechsleri_USA Phytophthora_dreschleri_Mexico Phytophthora_erythroseptica_California Phytophthora_erythroseptica_Ireland Phytophthora_erythroseptica_Ohio Phytophthora_fragariae_Maryland Phytophthora_fragariae_Oregon Phytophthora_fragariae_rubi Phytophthora_gonapodyides Phytophthora_heveae Phytophthora_hibernalis_Australia Phytophthora_hibernalis_New_Zealand Phytophthora_hibernalis_Portugal Phytophthora_ilicis_California Phytophthora_ilicis_Oregon Phytophthora_infestans_2 Phytophthora_infestans_Mexico Phytophthora_infestans_Pennsylvania Phytophthora_infestans_Washington Phytophthora_lateralis_452 Phytophthora_lateralis_455 Phytophthora_lateralis_USA Phytophthora_megakarya_Cameroon Phytophthora_megakarya_Nigeria Phytophthora_megasperma_Australia Phytophthora_megasperma_California_2 Phytophthora_megasperma_Washington Phytophthora_mirabolis_Mexico_1 Phytophthora_mirabolis_Mexico_2 Phytophthora_nicotianae_Australia Phytophthora_nicotianae_Florida Phytophthora_palmivora_Brazil Phytophthora_palmivora_Florida Phytophthora_palmivora_Nigeria Phytophthora_phaseoli Phytophthora_pseudotsugae Phytophthora_sojae Phytophthora_syringae_Oregon_468 Phytophthora_syringae_Oregon_469 Phytophthora_syringae_Scotland Phytophthora_tropicalis Pythium_aphanidermatum Pythium_ultimum ; END; BEGIN TREES; TITLE Tb8140; LINK TAXA = COX2; TREE Fig._4 = [&R] (Pythium_ultimum,(Pythium_aphanidermatum,((((((((Phytophthora_arecea,Phytophthora_palmivora_Nigeria),Phytophthora_palmivora_Florida),Phytophthora_palmivora_Brazil),(Phytophthora_megakarya_Nigeria,Phytophthora_megakarya_Cameroon)),(((((Phytophthora_capsici_302,Phytophthora_capsici_RA4,Phytophthora_capsici_220,'Phytophthora capsici Cp-D2',Phytophthora_capsici_R1198,Phytophthora_capsici_R699,(Phytophthora_capsici_RA1,Phytophthora_capsici_CBS_128.23,'Phytophthora capsici Cp-D3',Phytophthora_capsici_R1298),Phytophthora_capsici_B2HH4),(Phytophthora_capsici_59E,'Phytophthora capsici Cp-1'),'Phytophthora capsici Cp-2',('Phytophthora capsici Cp-In',Phytophthora_tropicalis),(Phytophthora_capsici_215E,Phytophthora_capsici_197E)),(Phytophthora_colocasiae_China,Phytophthora_colocasiae_India,Phytophthora_colocasiae_Indonesia)),(Phytophthora_citricola_Florida,Phytophthora_citricola_California)),((Phytophthora_gonapodyides,(Phytophthora_megasperma_Washington,Phytophthora_megasperma_Australia)),Phytophthora_megasperma_California_2))),((((((Phytophthora_cactorum_Washington,Phytophthora_cactorum_New_York,Phytophthora_cactorum_California),Phytophthora_pseudotsugae),(((Phytophthora_infestans_Mexico,Phytophthora_infestans_2),Phytophthora_infestans_Pennsylvania,Phytophthora_infestans_Washington),((Phytophthora_mirabolis_Mexico_1,Phytophthora_mirabolis_Mexico_2),Phytophthora_phaseoli))),(Phytophthora_nicotianae_Australia,Phytophthora_nicotianae_Florida)),((((Phytophthora_cryptogea,Phytophthora_erythroseptica_Ireland),(Phytophthora_erythroseptica_Ohio,Phytophthora_erythroseptica_California)),(Phytophthora_dreschleri_Mexico,Phytophthora_drechsleri_USA)),((Phytophthora_syringae_Scotland,Phytophthora_syringae_Oregon_468),Phytophthora_syringae_Oregon_469))),(((Phytophthora_hibernalis_Portugal,Phytophthora_hibernalis_Australia,Phytophthora_hibernalis_New_Zealand),(Phytophthora_lateralis_USA,Phytophthora_lateralis_452,Phytophthora_lateralis_455)),(Phytophthora_ilicis_Oregon,Phytophthora_ilicis_California)))),(Phytophthora_boehemeriae,Phytophthora_heveae)),((Phytophthora_cinnamomi,(Phytophthora_fragariae_rubi,(Phytophthora_fragariae_Maryland,Phytophthora_fragariae_Oregon))),Phytophthora_sojae)))); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr2641] END;