#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 15, 2024; 20:38 GMT

TreeBASE (cc) 1994-2008

Study reference:
Sanchez-puerta M., Cho Y., Mower J., Alverson A., Gummow J., & Palmer J. 2008. Horizontal
transfer of cox1 group I intron among flowering plants: assessing the variation
in the coconversion tract. BMC Evolutionary Biology, null.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S1928]

BEGIN TAXA;
        TITLE  TaxonLabelSet13359;
        DIMENSIONS NTAX=126;
        TAXLABELS
            Acalypha
            Aframomum_angustifolium
            Ajuga_reptans
            Alstonia_plumosa
            Alyxia_loeseneriana
            Amborella_trichopoda
            Amorphophallus_rivieri
            Aragoa_abietina
            Aragoa_cundinmarcensis
            Arisaema_triphyllum
            Barleria_prionitis
            Barringtonia_asiatica
            Bathiorhamnus_cryptophorus
            Bertiera_laxissima
            Boesenbergia_rotunda
            Brexia_madagascarensis
            Breynia_nivosa
            Burbidgea_nitida
            Bursera
            Calceolaria
            Callitriche_heterophylla
            Calochone_redingii
            Calycosiphonia_macrochlamys
            Catalpa_fargesii
            Celsia_arturus
            Citrullus_lanatus
            Clerodendrum_trichotomum
            Codiaeum_peltatum
            Coffea_arabica
            Coffea_magnistipula
            Cominsia_gigantea
            Condalia_microphylla
            Croton
            Cucumis_melo
            Cucumis_metuliferus
            Cucumis_sativus
            Curcuma_longa
            Digitalis_purpurea
            Diospyros_virginiana
            Discaria_chacaye
            Donax_canniformis
            Drymonia_serrulata
            Dysoxylum_canalense
            Ehretia_anacua
            Euphorbia_millii
            Frangula_alnus
            Gagnepainia_godefroyi
            Globba_sessiliflora
            Hebe_subalpina
            Hedychium_coronarium
            Heliotropium_arborescens
            Hevea_brasiliensis
            Hippuris_vulgaris
            Hovenia_dulcis
            Hoya_sikkimensis
            Hura_crepitans
            Hybanthus
            Hydrocotyle_rotundifolia
            Ilex
            Ischnosiphon_helenae
            Ixora_sp.1
            Ixora_sp.2
            Jasminum_polyanthum
            Justicia_americana
            Kaempferia_rotunda
            Karwinskia_kumboldtiana
            Knema_latericia
            Lamium
            Lepionurus_sylvestris
            Linum
            Maesopsis_eminii
            Malpighia_glabra
            Maranta_bicolor
            Maranta_leuconeura
            Marantochloa_purpurea
            Melia_toosendan
            Melothria_indica
            Monotagma_laxum
            Montrouziera_cauliflora
            Musa_nana
            Musella_lasiocarpa
            Myristica_fragrans
            Neisosperma_brevituba
            Nematanthus_hirsutus
            Nerium_oleander
            Nesiota_elliptica
            Ochrosia_elliptica
            Oxera
            Paliurus_spina_christi
            Paulownia_tomentosa
            Philodendron_oxycardium
            Phylica_emirnensis
            Phyllanthus_gneissicus
            Physostegia_virginiana
            Pilea_fontana
            Pistia_stratiotes
            Plagiostachys
            Psilanthus_melanocarpus
            Pyrola_secunda
            Rehmannia_glutinosa
            Rhamnella_franguloides
            Rhamnus_cathartica
            Sanchezia_nobilis
            Saranthe_leptostachya
            Saranthe_sp.
            Scrophularia_nodosa
            Scutellaria_mociniana
            Sesamum_indicum
            Shorea_talura
            Sibthorpia_peregrina
            Siphonochilus_decorus
            Smithatris_myanmarensis
            Stachyphrynium_repens
            Strelitzia_reginae
            Strychnos_spinosa
            Symplocus_paniculata
            Thunbergia_erecta
            Trymalium_cf_floribundum
            Ventilago_leiocarpa
            Veronica_agrestis
            Vinca_rosea
            Viola
            Xanthosoma_mafaffa
            Zamioculcas_zamiifolia
            Zantedeschia_aethiopica
            Ziziphus_ornata
            ;
END;

BEGIN TREES;
      TITLE Tb8719;
      LINK TAXA = TaxonLabelSet13359;
      TREE Fig._S1 = [&R] ((((((Ochrosia_elliptica,(Alstonia_plumosa,Nerium_oleander)),Alyxia_loeseneriana),(Neisosperma_brevituba,Vinca_rosea)),Coffea_magnistipula),Strychnos_spinosa),(Calochone_redingii,(Psilanthus_melanocarpus,(((Coffea_arabica,Ixora_sp.1),(Paliurus_spina_christi,(Ixora_sp.2,Ventilago_leiocarpa))),Calycosiphonia_macrochlamys))),(((Ilex,(Hydrocotyle_rotundifolia,((Diospyros_virginiana,(Symplocus_paniculata,(Barringtonia_asiatica,Pyrola_secunda))),(((Pilea_fontana,((Frangula_alnus,(Phylica_emirnensis,((Hoya_sikkimensis,Nesiota_elliptica),((Discaria_chacaye,Karwinskia_kumboldtiana),Hovenia_dulcis)))),((Trymalium_cf_floribundum,Bathiorhamnus_cryptophorus),((Condalia_microphylla,(Bertiera_laxissima,Ziziphus_ornata)),((Rhamnus_cathartica,Maesopsis_eminii),Rhamnella_franguloides))))),(((Dysoxylum_canalense,Bursera),Melia_toosendan),(((((Hybanthus,Viola),Linum),(((Acalypha,Montrouziera_cauliflora),(Breynia_nivosa,Phyllanthus_gneissicus)),((Hevea_brasiliensis,((Croton,Codiaeum_peltatum),Hura_crepitans)),Euphorbia_millii))),Malpighia_glabra),((Melothria_indica,(Citrullus_lanatus,((Cucumis_melo,Cucumis_sativus),Cucumis_metuliferus))),(Shorea_talura,Brexia_madagascarensis))))),(Lepionurus_sylvestris,(((Knema_latericia,Myristica_fragrans),Amborella_trichopoda),(((((Kaempferia_rotunda,(((Gagnepainia_godefroyi,Smithatris_myanmarensis),Curcuma_longa),((Hedychium_coronarium,Boesenbergia_rotunda),((Burbidgea_nitida,Plagiostachys),Aframomum_angustifolium)))),Globba_sessiliflora),((Maranta_bicolor,((((Cominsia_gigantea,Stachyphrynium_repens),Monotagma_laxum),Maranta_leuconeura),(Marantochloa_purpurea,(Donax_canniformis,(Ischnosiphon_helenae,Saranthe_sp.))))),Saranthe_leptostachya)),(Strelitzia_reginae,((Musella_lasiocarpa,Musa_nana),Siphonochilus_decorus))),((((Xanthosoma_mafaffa,Amorphophallus_rivieri),(Zamioculcas_zamiifolia,(Philodendron_oxycardium,Zantedeschia_aethiopica))),Arisaema_triphyllum),Pistia_stratiotes)))))))),(Jasminum_polyanthum,(Calceolaria,((Paulownia_tomentosa,((Aragoa_abietina,Aragoa_cundinmarcensis),(Callitriche_heterophylla,((Veronica_agrestis,Hebe_subalpina),Sibthorpia_peregrina)))),((((Scrophularia_nodosa,Celsia_arturus),((Rehmannia_glutinosa,(Drymonia_serrulata,Nematanthus_hirsutus)),Sesamum_indicum)),((Thunbergia_erecta,(Barleria_prionitis,(Justicia_americana,Sanchezia_nobilis))),Catalpa_fargesii)),(Digitalis_purpurea,(((Scutellaria_mociniana,((Clerodendrum_trichotomum,Oxera),Ajuga_reptans)),(Physostegia_virginiana,Lamium)),Hippuris_vulgaris))))))),(Heliotropium_arborescens,Ehretia_anacua)));
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr2908]


END;