#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 11, 2024; 23:16 GMT TreeBASE (cc) 1994-2008 Study reference: Feau N., Vialle A., Allaire M., Maier W., & Hamelin R. 2011. DNA barcoding in the rust genus Chrysomyxa and its implications for the phylogeny of the genus. Mycologia, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S11350] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=81; TAXLABELS Chrysomyxa_arctostaphyli_1299CHA_PCE_WY Chrysomyxa_arctostaphyli_1301CHA_ARU_KE Chrysomyxa_arctostaphyli_501CHA_PCM_YU8 Chrysomyxa_arctostaphyli_503CHA_PCG_NO1 Chrysomyxa_cassandrae_1149CHC_PCM_PL Chrysomyxa_cassandrae_199CHL_PCM_X3 Chrysomyxa_cassandrae_202CHC_CHC_LE3 Chrysomyxa_cassandrae_327CH_PC_SB9 Chrysomyxa_cassandrae_623CHC_CHC_ZM19 Chrysomyxa_cassandrae_624CHC_CHC_ZM20 Chrysomyxa_cassandrae_625CHC_CHC_ZM21 Chrysomyxa_cassandrae_813CH_PC_LP4 Chrysomyxa_chiogenis_224CHS_GAH_ZM3 Chrysomyxa_chiogenis_630CHS_GAH_ZM26 Chrysomyxa_chiogenis_631CHS_GAH_ZM27 Chrysomyxa_chiogenis_685CHS_GAH_MA1 Chrysomyxa_chiogenis_730CHS_GAH_ZM74 Chrysomyxa_empetri_1302CHE_EMN_BF Chrysomyxa_empetri_287CHE_EMN_SA1 Chrysomyxa_empetri_755CHE_EMN_RA1 Chrysomyxa_empetri_863CHE_EMN_ZM99 Chrysomyxa_ledi_1305CHL_LEP_PL Chrysomyxa_ledi_1306CHL_LEP_FI Chrysomyxa_ledi_1307CHL_LEP_FI Chrysomyxa_ledi_1308CHL_PCA_FI Chrysomyxa_ledicola_17CH_LEG_RN3 Chrysomyxa_ledicola_193CHO_PCM_X1a Chrysomyxa_ledicola_194CHO_PCM_X1b Chrysomyxa_ledicola_195CHO_PCM_X1c Chrysomyxa_ledicola_196CHO_PCG_X2a Chrysomyxa_ledicola_24CHO_LEG_RW1 Chrysomyxa_ledicola_272CH_PC_ZM9 Chrysomyxa_ledicola_273CH_PC_ZM10 Chrysomyxa_ledicola_274CH_PC_ZM11 Chrysomyxa_ledicola_395CHO_PCM_X14 Chrysomyxa_ledicola_635CHO_LEG_ZM31 Chrysomyxa_ledicola_662CHO_LEG_MN6 Chrysomyxa_ledicola_791CH_PC_CI4 Chrysomyxa_monesis_1309CHM_MOU_GR Chrysomyxa_monesis_1310CHM_MOU_MS Chrysomyxa_monesis_1360CHM_PCS_BC Chrysomyxa_monesis_1361CHM_PCS_BC Chrysomyxa_monesis_509CHM_MOU_BC31 Chrysomyxa_nagodhii_201CH_LE_LE2 Chrysomyxa_nagodhii_268CH_PC_PO2 Chrysomyxa_nagodhii_639CH_LEG_ZM35 Chrysomyxa_nagodhii_657CH_LEG_MN1 Chrysomyxa_nagodhii_718CH_PC_ZM62 Chrysomyxa_neoglandulosi_510CHN_LEL_BC32 Chrysomyxa_piperiana_1214CHPP_RHM_BC Chrysomyxa_pyrolae_1108CHP_PY_GB Chrysomyxa_pyrolae_1325CHP_PY_BC Chrysomyxa_pyrolae_1326CHP_PY_BC Chrysomyxa_pyrolae_166CHP_PC_X24 Chrysomyxa_pyrolae_190CHP_PCG_DU2 Chrysomyxa_pyrolae_314CHP_PCG_DU1 Chrysomyxa_pyrolae_390CHP_PCG_VF1 Chrysomyxa_pyrolae_920CHP_PY_BI19 Chrysomyxa_pyrolae_921CHP_PY_BI20 Chrysomyxa_rhododendri_1210CHR_RHL_BC Chrysomyxa_rhododendri_1211CHR_RHL_BC Chrysomyxa_rhododendri_1457CHR_RHF_FR Chrysomyxa_rhododendri_186CHR_PCA_DJ1 Chrysomyxa_rhododendri_189CHR_PCA_DJ4 Chrysomyxa_rhododendri_888CHR_RHF_SW2 Chrysomyxa_rhododendri_888CHR_RHF_SW2b Chrysomyxa_vaccinii_1319CHV_VAP_BC Chrysomyxa_vaccinii_1355CHV_VAP_BC Chrysomyxa_vaccinii_1356CHV_VAP_BC Chrysomyxa_weirii_545CHW_PC_ON31 Chrysomyxa_weirii_574CHW_X_MA7 Chrysomyxa_weirii_912CHW_PCG_BU3 Chrysomyxa_woroninii_1312CHM_PCG_YU Chrysomyxa_woroninii_1320CHI_LED_YU Chrysomyxa_woroninii_1323CHI_PCA_FI Chrysomyxa_woroninii_225XCHI_LEG_ZM4 Chrysomyxa_woroninii_464CHM_PCG_YU5 Chrysomyxa_woroninii_627CHI_LEG_ZM23 Chrysomyxa_woroninii_629CHI_LEG_ZM25 Chrysomyxa_woroninii_629CHI_LEG_ZM25b Peridermium_zilleri_1359CHL_PCS_BC ; END; BEGIN TREES; TITLE 28S_NJ; LINK TAXA = Taxa; TREE PAUP_1 = [&R] ((Chrysomyxa_weirii_912CHW_PCG_BU3:0.0,(Chrysomyxa_weirii_545CHW_PC_ON31:0.0,Chrysomyxa_weirii_574CHW_X_MA7:0.0):0.0):0.121769,(((Chrysomyxa_monesis_509CHM_MOU_BC31:0.0,(Chrysomyxa_monesis_1361CHM_PCS_BC:0.0,(Chrysomyxa_monesis_1310CHM_MOU_MS:0.0,(Chrysomyxa_monesis_1309CHM_MOU_GR:0.0,Chrysomyxa_monesis_1360CHM_PCS_BC:0.0):0.00149):0.0):0.0):0.0,(Chrysomyxa_pyrolae_1108CHP_PY_GB:0.0,(Chrysomyxa_pyrolae_1326CHP_PY_BC:0.0,(Chrysomyxa_pyrolae_1325CHP_PY_BC:0.0,(Chrysomyxa_pyrolae_921CHP_PY_BI20:0.0,(Chrysomyxa_pyrolae_920CHP_PY_BI19:0.0,(Chrysomyxa_pyrolae_390CHP_PCG_VF1:0.0,(Chrysomyxa_pyrolae_314CHP_PCG_DU1:0.0,(Chrysomyxa_pyrolae_166CHP_PC_X24:0.0,Chrysomyxa_pyrolae_190CHP_PCG_DU2:0.0):0.0):0.0):0.0):0.0):0.001489):0.0):0.0):0.001489):0.013151,((Chrysomyxa_woroninii_1312CHM_PCG_YU:0.0,(Chrysomyxa_woroninii_629CHI_LEG_ZM25b:0.0,(Chrysomyxa_woroninii_627CHI_LEG_ZM23:0.0,(Chrysomyxa_woroninii_464CHM_PCG_YU5:0.0,(Chrysomyxa_woroninii_225XCHI_LEG_ZM4:0.0,(Chrysomyxa_woroninii_1320CHI_LED_YU:0.0,Chrysomyxa_woroninii_1323CHI_PCA_FI:0.0):0.0):0.0):0.0):0.0):0.0):0.001646,((Chrysomyxa_arctostaphyli_503CHA_PCG_NO1:0.0,(Chrysomyxa_arctostaphyli_501CHA_PCM_YU8:0.0,(Chrysomyxa_arctostaphyli_1299CHA_PCE_WY:0.0,Chrysomyxa_arctostaphyli_1301CHA_ARU_KE:0.0):0.0):0.001471):0.006013,((Chrysomyxa_chiogenis_730CHS_GAH_ZM74:0.0,(Chrysomyxa_chiogenis_685CHS_GAH_MA1:0.0,(Chrysomyxa_chiogenis_631CHS_GAH_ZM27:0.0,(Chrysomyxa_chiogenis_224CHS_GAH_ZM3:0.0,Chrysomyxa_chiogenis_630CHS_GAH_ZM26:0.0):0.0):0.0):0.0):0.001482,((Chrysomyxa_empetri_863CHE_EMN_ZM99:0.0,(Chrysomyxa_empetri_755CHE_EMN_RA1:0.0,(Chrysomyxa_empetri_1302CHE_EMN_BF:0.0,Chrysomyxa_empetri_287CHE_EMN_SA1:0.0):0.0):0.0):0.004458,((Chrysomyxa_cassandrae_1149CHC_PCM_PL:0.0,(Chrysomyxa_woroninii_629CHI_LEG_ZM25:0.0,(Chrysomyxa_nagodhii_718CH_PC_ZM62:0.0,(Chrysomyxa_nagodhii_657CH_LEG_MN1:0.0,(Chrysomyxa_nagodhii_639CH_LEG_ZM35:0.0,(Chrysomyxa_nagodhii_201CH_LE_LE2:0.0,Chrysomyxa_nagodhii_268CH_PC_PO2:0.0):0.0):0.0):0.0):0.0):0.001475):0.0,((Chrysomyxa_cassandrae_813CH_PC_LP4:0.0,(Chrysomyxa_cassandrae_625CHC_CHC_ZM21:0.0,(Chrysomyxa_cassandrae_624CHC_CHC_ZM20:0.0,(Chrysomyxa_cassandrae_623CHC_CHC_ZM19:0.0,(Chrysomyxa_cassandrae_327CH_PC_SB9:0.0,(Chrysomyxa_cassandrae_199CHL_PCM_X3:0.0,Chrysomyxa_cassandrae_202CHC_CHC_LE3:0.0):0.0):0.0):0.0):0.0):0.0):0.001475,(Chrysomyxa_piperiana_1214CHPP_RHM_BC:0.0,(Chrysomyxa_rhododendri_1210CHR_RHL_BC:0.0,(Chrysomyxa_rhododendri_1211CHR_RHL_BC:0.0,(Chrysomyxa_vaccinii_1319CHV_VAP_BC:0.0,(Chrysomyxa_vaccinii_1355CHV_VAP_BC:0.0,(Chrysomyxa_vaccinii_1356CHV_VAP_BC:0.0,(Chrysomyxa_ledicola_272CH_PC_ZM9:0.0,((Chrysomyxa_ledicola_395CHO_PCM_X14:0.0,(Chrysomyxa_ledicola_196CHO_PCG_X2a:0.0,(Chrysomyxa_neoglandulosi_510CHN_LEL_BC32:0.0,(Chrysomyxa_rhododendri_1457CHR_RHF_FR:0.0,Peridermium_zilleri_1359CHL_PCS_BC:0.0):0.0):0.0):0.0):0.0,(Chrysomyxa_ledicola_662CHO_LEG_MN6:0.0,(Chrysomyxa_ledicola_273CH_PC_ZM10:0.0,(Chrysomyxa_ledicola_195CHO_PCM_X1c:0.0,(Chrysomyxa_ledicola_194CHO_PCM_X1b:0.0,(Chrysomyxa_ledicola_635CHO_LEG_ZM31:0.0,((Chrysomyxa_ledicola_193CHO_PCM_X1a:0.0,(Chrysomyxa_ledicola_791CH_PC_CI4:0.0,(Chrysomyxa_ledicola_274CH_PC_ZM11:0.0,(Chrysomyxa_ledicola_24CHO_LEG_RW1:0.0,(Chrysomyxa_ledicola_17CH_LEG_RN3:0.0,Chrysomyxa_rhododendri_888CHR_RHF_SW2:0.0):0.0):0.0):0.0):0.0):0.0,(Chrysomyxa_rhododendri_189CHR_PCA_DJ4:0.0,(Chrysomyxa_ledi_1308CHL_PCA_FI:0.0,(Chrysomyxa_ledi_1307CHL_LEP_FI:0.0,(Chrysomyxa_ledi_1306CHL_LEP_FI:0.0,(Chrysomyxa_ledi_1305CHL_LEP_PL:0.0,(Chrysomyxa_rhododendri_186CHR_PCA_DJ1:0.0,Chrysomyxa_rhododendri_888CHR_RHF_SW2b:0.0):0.0):0.0):0.0):0.0):0.0):0.002974):0.0):0.001481):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.001471):0.003061):0.002785):0.021824):0.121769); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr31454] END;