#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 15, 2024; 18:18 GMT

TreeBASE (cc) 1994-2008

Study reference:
Belfiore N., Liu L., & Moritz C. 2008. Multilocus Phylogenetics of a Rapid Radiation
in the Genus Thomomys (Rodentia: Geomyidae). Systematic Biology, 57(2): 294-310.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S2005]

BEGIN TAXA;
        TITLE  TBO64_gene_tree;
        DIMENSIONS NTAX=28;
        TAXLABELS
            Geomys_breviceps
            Orthogeomys_heterodus
            Thomomys_bottae_albatus
            Thomomys_bottae_alpinus
            Thomomys_bottae_awahnee_a
            Thomomys_bottae_awahnee_b
            Thomomys_bottae_bottae
            Thomomys_bottae_cactophilus
            Thomomys_bottae_laticeps
            Thomomys_bottae_mewa
            Thomomys_bottae_riparius
            Thomomys_bottae_ruidosae
            Thomomys_bottae_saxatilis
            Thomomys_bottae_xerophilus
            Thomomys_bulbivorus
            Thomomys_idahoensis_pygmaeus_a
            Thomomys_idahoensis_pygmaeus_b
            Thomomys_mazama_mazama
            Thomomys_mazama_nasicus
            Thomomys_monticola_a
            Thomomys_monticola_b
            Thomomys_talpoides_bridgeri
            Thomomys_talpoides_ocius
            Thomomys_talpoides_yakimensis
            Thomomys_townsendii_relictus
            Thomomys_townsendii_townsendii
            Thomomys_umbrinus_atroavarius
            Thomomys_umbrinus_chihuahuae
            ;
END;

BEGIN TREES;
      TITLE Tb8919;
      LINK TAXA = TBO64_gene_tree;
      TREE Fig._2f = [&R] (Orthogeomys_heterodus,Thomomys_bottae_laticeps,(((Thomomys_bottae_awahnee_a,(Thomomys_bottae_alpinus,Thomomys_bottae_saxatilis)),Thomomys_bottae_awahnee_b),Thomomys_bottae_ruidosae,Thomomys_bottae_mewa),((Thomomys_bottae_xerophilus,(Thomomys_bottae_cactophilus,(((((Thomomys_bottae_riparius,Thomomys_townsendii_relictus),Thomomys_umbrinus_chihuahuae,Thomomys_umbrinus_atroavarius),Thomomys_bulbivorus),((Thomomys_talpoides_ocius,Thomomys_idahoensis_pygmaeus_a,Thomomys_idahoensis_pygmaeus_b,Thomomys_mazama_nasicus,Thomomys_monticola_a,Thomomys_monticola_b,Thomomys_talpoides_yakimensis),Thomomys_mazama_mazama,Thomomys_talpoides_bridgeri)),Thomomys_townsendii_townsendii))),Thomomys_bottae_albatus,Thomomys_bottae_bottae));
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr360]


END;