#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 17, 2024; 5:29 GMT

TreeBASE (cc) 1994-2008

Study reference:
Chou H., & Wu W. 2002. Phylogenetic Analysis of Internal Transcribed Spacer Regions
of the Genus Alternaria, and the significance of filament-beaked conidia. Molecular
Ecology, 106(2): 164-169.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S763]

BEGIN TAXA;
        TITLE  distance;
        DIMENSIONS NTAX=47;
        TAXLABELS
            Alternaria_alternata
            Alternaria_brassicae
            Alternaria_brassicicola
            Alternaria_carotiincultae
            Alternaria_carthami
            Alternaria_cheiranithi
            Alternaria_crassa
            Alternaria_dauci
            Alternaria_dianthi
            Alternaria_dianthicola
            Alternaria_infectoria
            Alternaria_japonica
            Alternaria_lini
            Alternaria_linicola
            Alternaria_longipes
            Alternaria_macrospora
            Alternaria_panax
            Alternaria_petroselini
            Alternaria_photistica
            Alternaria_porri
            Alternaria_protenta
            Alternaria_radicina
            Alternaria_raphani
            Alternaria_selini
            Alternaria_sesami
            Alternaria_smyrnii
            Alternaria_solani
            Alternaria_tagetica
            Alternaria_tenuissima
            Alternaria_zinniae
            Exserohilum_mcginnisii
            Exserohilum_pedicellatum
            Lewia_infectoria
            Nimbya_gomphrenae
            Pleospora_herbarum
            Pleospora_tarda
            Stemphylium_alfalfae
            Stemphylium_botrysum
            Stemphylium_callistephi
            Stemphylium_herbarum
            Stemphylium_sarcinaeforme
            Stemphylium_solani
            Stemphylium_vesicarium
            Ulocladium_alternariae
            Ulocladium_atrum
            Ulocladium_botrytis
            Ulocladium_chartarum
            ;
END;

BEGIN TREES;
      TITLE Tb5981;
      LINK TAXA = distance;
      TREE Fig._1 = [&R] (((((Alternaria_sesami,(Alternaria_zinniae,Alternaria_carthami)),(Alternaria_macrospora,Alternaria_protenta),Alternaria_linicola,(Alternaria_crassa,Alternaria_tagetica),(Alternaria_dauci,Alternaria_porri)),Alternaria_solani)filamentbeaked_Alternaria,((Alternaria_alternata,Alternaria_lini),Alternaria_longipes),(((Ulocladium_chartarum,(((Ulocladium_atrum,Ulocladium_botrytis),Alternaria_cheiranithi),Alternaria_dianthicola)),((Alternaria_carotiincultae,Alternaria_radicina),((Alternaria_petroselini,Alternaria_selini),Alternaria_smyrnii))),((Lewia_infectoria,Alternaria_infectoria),(Alternaria_brassicicola,((Alternaria_japonica,Alternaria_raphani),Ulocladium_alternariae))),(Alternaria_brassicae,(Alternaria_dianthi,Alternaria_tenuissima)),(Alternaria_photistica,Alternaria_panax))smallspored_Alternaria,(((((Stemphylium_alfalfae,Stemphylium_herbarum,Pleospora_herbarum,Stemphylium_botrysum),Stemphylium_vesicarium),(Pleospora_tarda,Stemphylium_callistephi)),Stemphylium_sarcinaeforme,Stemphylium_solani)Stemphylium,(Exserohilum_mcginnisii,Exserohilum_pedicellatum)))Pleosporales,Nimbya_gomphrenae);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr3837]


END;