#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 15, 2024; 20:06 GMT

TreeBASE (cc) 1994-2008

Study reference:
Erpenbeck D., Weier T., De voogd N.J., Wörheide G., Sutcliffe P., Todd J.A., & Michel
E. 2011. Insights into the evolution of freshwater sponges (Porifera: Demospongiae:
Spongillina): New barcoding data from Lake Tanganyika endemics indicates
multiple invasions and unsettles existing taxonomy. Molecular Phylogenetics and
Evolution, .

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S11453]

BEGIN TAXA;
        TITLE  Taxa;
        DIMENSIONS NTAX=48;
        TAXLABELS
            Baikalospongia_bacillifera_DQ167167
            Baikalospongia_bacillifera_DQ176780
            Baikalospongia_bacillifera_EU000570
            Baikalospongia_dzhegatajensis_EF025856
            Baikalospongia_intermedia_DQ167168
            Baikalospongia_intermedia_EU000567
            Baikalospongia_recta_EU000569
            Corvomeyenia_sp_DQ176781
            Echinospongilla_brichardi_EU000573
            Ephydatia_fluviatilis_AJ843884
            Ephydatia_fluviatilis_DQ087505
            Ephydatia_fluviatilis_DQ167174
            Ephydatia_fluviatilis_DQ176777
            Ephydatia_muelleri_DQ167172
            Ephydatia_muelleri_DQ176778
            Ephydatia_sp_DQ167173
            Eunapius_carteri_DQ167175
            Eunapius_fragilis_AJ843882
            Eunapius_fragilis_DQ176779
            Eunapius_sp__JF816209
            Eunapius_sp_DQ167181
            Eunapius_sp_JF816199
            Eunapius_sp_JF816200
            Eunapius_sp_JF816203
            Eunapius_sp_JF816204
            Eunapius_sp_JF816205
            Eunapius_sp_JF816208
            Eunapius_sp_JF816210
            Eunapius_sp_JF816211
            Lubomirskia_abietina_DQ167170
            Lubomirskia_baicalensis_DQ167169
            Lubomirskia_baicalensis_EU000568
            Nudospongilla_vasta_DQ167179
            Nudospongilla_vasta_DQ167180
            Ochridaspongia_sp_EF025855
            Oncosclera_sp_JF816201
            Oncosclera_sp_JF816202
            Pachydictyum_globosum_DQ167177
            Pachydictyum_incrustans_DQ167178
            Spongilla_lacustris_AJ843883
            Spongilla_lacustris_DQ167176
            Spongilla_lacustris_EU000572
            Spongillina_sp_JF816206
            Spongillina_sp_JF816207
            Swartschewskia_papyracea_DQ167171
            Swartschewskia_papyracea_EU000571
            Trochospongilla_horrida_EF025854
            Trochospongilla_pennsylvanica_DQ087503
            ;
END;

BEGIN TREES;
      TITLE LTA_C13;
      LINK TAXA = Taxa;
      TREE PAUP_1 = [&R] (Corvomeyenia_sp_DQ176781:0.015725,((Trochospongilla_horrida_EF025854:0.003982,((Nudospongilla_vasta_DQ167179:0.0,Nudospongilla_vasta_DQ167180:0.0):0.003811,(Trochospongilla_pennsylvanica_DQ087503:0.001896,(Pachydictyum_globosum_DQ167177:0.0,Pachydictyum_incrustans_DQ167178:0.00193):0.0):0.0):0.00385):0.003842,((Spongilla_lacustris_EU000572:0.0,(Spongilla_lacustris_DQ167176:0.0,(Spongilla_lacustris_AJ843883:0.0,((Eunapius_fragilis_AJ843882:0.0,(Eunapius_carteri_DQ167175:0.0,Eunapius_fragilis_DQ176779:0.0):0.0):0.003773,(Eunapius_sp_JF816203:0.0,(Eunapius_sp_JF816210:0.0,(Eunapius_sp_JF816208:0.0,(Eunapius_sp_JF816205:0.0,(Eunapius_sp_JF816204:0.0,(Eunapius_sp_JF816200:0.0,(Eunapius_sp__JF816209:0.0,(Eunapius_sp_JF816199:0.0,Eunapius_sp_JF816211:0.007679):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.001875):0.0):0.0):0.001892):0.0,(((Spongillina_sp_JF816206:0.0,Echinospongilla_brichardi_EU000573:0.0):0.001874,(Spongillina_sp_JF816207:0.0,(Oncosclera_sp_JF816201:0.0,Oncosclera_sp_JF816202:0.0):0.003862):0.0):0.007783,(((Swartschewskia_papyracea_EU000571:0.00187,(Ephydatia_sp_DQ167173:0.0,Eunapius_sp_DQ167181:0.001868):0.0):0.0,(Ephydatia_fluviatilis_DQ087505:0.0,(Ephydatia_fluviatilis_DQ176777:0.0,(Ephydatia_fluviatilis_DQ167174:0.0,(Ephydatia_fluviatilis_AJ843884:0.0,(Swartschewskia_papyracea_DQ167171:0.0,(Baikalospongia_dzhegatajensis_EF025856:0.0,Ochridaspongia_sp_EF025855:0.001998):0.0):0.0):0.0):0.0):0.0):0.001873):0.001868,(Baikalospongia_bacillifera_EU000570:0.0,(Baikalospongia_intermedia_EU000567:0.0,(Baikalospongia_intermedia_DQ167168:0.0,(Baikalospongia_recta_EU000569:0.0,(Lubomirskia_baicalensis_EU000568:0.0,(Lubomirskia_baicalensis_DQ167169:0.0,(Ephydatia_muelleri_DQ176778:0.0,(Ephydatia_muelleri_DQ167172:0.0,(Baikalospongia_bacillifera_DQ176780:0.0,(Baikalospongia_bacillifera_DQ167167:0.0,Lubomirskia_abietina_DQ167170:0.001874):0.00188):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.005716):0.0):0.0):0.015725);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr44958]


END;