#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 16, 2024; 2:13 GMT TreeBASE (cc) 1994-2008 Study reference: Erpenbeck D., Weier T., De voogd N.J., Wörheide G., Sutcliffe P., Todd J.A., & Michel E. 2011. Insights into the evolution of freshwater sponges (Porifera: Demospongiae: Spongillina): New barcoding data from Lake Tanganyika endemics indicates multiple invasions and unsettles existing taxonomy. Molecular Phylogenetics and Evolution, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S11453] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=71; TAXLABELS Baikalospongia_bacillifera_AY662501 Baikalospongia_bacillifera_DQ178656 Baikalospongia_intermedia_AY662500 Baikalospongia_robusta_AY662503 Corvomeyenia_sp_DQ178649 Echinospongilla_brichardi_EF418032 Ephydatia_cooperensis_DQ178652 Ephydatia_fluviatilis_AJ705048 Ephydatia_fluviatilis_DQ178657 Ephydatia_fluviatilis_EF151942 Ephydatia_fluviatilis_EF151951 Ephydatia_fluviatilis_EF534497 Ephydatia_fluviatilis_EF534498 Ephydatia_fluviatilis_FJ890067 Ephydatia_fluviatilis_FJ890068 Ephydatia_muelleri_AY662506 Ephydatia_muelleri_DQ178654 Ephydatia_muelleri_EF151932 Ephydatia_muelleri_EF534499 Ephydatia_muelleri_EF534500 Ephydatia_sp_AM950183_TORE Ephydatia_sp_AM950184_TORE Ephydatia_sp_AM950185_CGT Ephydatia_sp_AM950186_CGT Ephydatia_sp_AM950187_CGT Ephydatia_sp_FJ719108 Ephydatia_sp_FJ719109 Ephydatia_sp_FJ719110 Ephydatia_sp_FJ719111 Eunapius_coniferus_EF151939 Eunapius_fragilis_DQ178651 Eunapius_ryensis_EF151948 Eunapius_sinensis_EF151949 Eunapius_sp_AY662508 Eunapius_sp_EF151934 Eunapius_sp_EF151937 Eunapius_sp_EF151943 Eunapius_sp_EF151946 Eunapius_sp_EF151950 Eunapius_sp_JF816194 Eunapius_sp_JF816195 Eunapius_sp_JF816196 Eunapius_sp_JF816197 Eunapius_sp_JF816198 Heterorotula_multidentata_EF151933 Heterorotula_multidentata_EF151936 Heterorotula_multidentata_EF151940 Heterorotula_multidentata_EF151941 Heterorotula_multidentata_EF151947 Lubomirskia_baicalensis_DQ178655 Lubomirskia_fusifera_AY662504 Lubomirskia_incrustans_DQ778324 Oncosclera_sp_JF816192 Oncosclera_sp_JF816193 Potamolepis_POT_AY662507 Radiospongilla_cerebellata_EF151938 Radiospongilla_cerebellata_EF151953 Radiospongilla_crateriformis_EF151952 Radiospongilla_sendaj_EF151954 Rezinkovia_abietina_AY662502 Spongilla_lacustris_AJ703890 Spongilla_lacustris_AY662505 Spongilla_lacustris_DQ178653 Spongilla_lacustris_EF151935 Spongilla_lacustris_EF151944 Spongilla_lacustris_EF151945 Swartschewskia_papyracea_AM950181 Swartschewskia_papyracea_AM950182 Swartschewskia_papyracea_AY662499 Trochospongilla_latouchiana_EF151955 Trochospongilla_pennsylvanica_DQ178650 ; END; BEGIN TREES; TITLE LTA_I21; LINK TAXA = Taxa; TREE PAUP_1 = [&R] ((Oncosclera_sp_JF816192:0.0,(Potamolepis_POT_AY662507:0.006971,(Echinospongilla_brichardi_EF418032:0.003644,Oncosclera_sp_JF816193:0.0):0.0):0.0):0.0635125,((Trochospongilla_latouchiana_EF151955:0.01255,Trochospongilla_pennsylvanica_DQ178650:0.022687):0.055393,(Corvomeyenia_sp_DQ178649:0.093682,(((Spongilla_lacustris_EF151935:0.0,(Spongilla_lacustris_EF151944:0.0,(Spongilla_lacustris_EF151945:0.003413,(Spongilla_lacustris_AY662505:0.0,(Spongilla_lacustris_DQ178653:0.0,Spongilla_lacustris_AJ703890:0.004147):0.003435):0.0):0.0):0.0):0.032048,((Radiospongilla_sendaj_EF151954:0.003536,Radiospongilla_crateriformis_EF151952:0.010827):0.0,((Radiospongilla_cerebellata_EF151953:0.0,Radiospongilla_cerebellata_EF151938:0.0):0.02729,((Eunapius_sinensis_EF151949:0.001973,(Eunapius_sp_EF151943:0.003423,(Eunapius_sp_EF151946:0.0,(Eunapius_sp_EF151937:0.0,(Eunapius_sp_EF151950:0.003418,(Eunapius_fragilis_DQ178651:0.0,Eunapius_sp_AY662508:0.0):0.0):0.0):0.0):0.0):0.0015):0.010947,((Eunapius_sp_EF151934:0.0,(Eunapius_coniferus_EF151939:0.00338,Eunapius_ryensis_EF151948:0.0):0.003394):0.002865,((Eunapius_sp_JF816194:0.0,Eunapius_sp_JF816195:0.0):0.003086,(Eunapius_sp_JF816196:0.0,(Eunapius_sp_JF816197:0.0,Eunapius_sp_JF816198:0.0):0.0):0.007139):0.009652):0.005157):0.027421):0.003611):0.014891):0.027559,(((Ephydatia_cooperensis_DQ178652:0.0,Ephydatia_fluviatilis_EF151951:0.0):0.003385,(Ephydatia_fluviatilis_FJ890068:0.0,(Ephydatia_sp_AM950187_CGT:0.0,(Ephydatia_fluviatilis_EF534497:0.0,(Ephydatia_sp_FJ719110:0.0,(Ephydatia_sp_FJ719111:0.0,(Ephydatia_fluviatilis_DQ178657:0.0,(Ephydatia_sp_FJ719108:0.0,(Ephydatia_fluviatilis_EF151942:0.0,(Ephydatia_fluviatilis_EF534498:0.003393,(Ephydatia_fluviatilis_FJ890067:0.0,(Ephydatia_fluviatilis_AJ705048:0.004155,(Ephydatia_sp_FJ719109:0.0,(Ephydatia_sp_AM950185_CGT:0.0,(Ephydatia_sp_AM950186_CGT:0.0,(Ephydatia_sp_AM950184_TORE:0.0,Ephydatia_sp_AM950183_TORE:0.0):0.0):0.0):0.011637):0.0):0.0):0.003406):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0):0.0,((Heterorotula_multidentata_EF151941:0.006898,(Heterorotula_multidentata_EF151947:0.0,(Heterorotula_multidentata_EF151940:0.0,(Heterorotula_multidentata_EF151933:0.0,Heterorotula_multidentata_EF151936:0.0):0.0):0.0):0.0):0.0,(Ephydatia_muelleri_DQ178654:0.0,((Ephydatia_muelleri_EF534499:0.0,(Ephydatia_muelleri_EF534500:0.0,(Ephydatia_muelleri_EF151932:0.0,Ephydatia_muelleri_AY662506:0.0):0.0):0.0):0.001779,(Baikalospongia_intermedia_AY662500:0.003378,((Rezinkovia_abietina_AY662502:0.0,(Baikalospongia_bacillifera_DQ178656:0.0,(Lubomirskia_incrustans_DQ778324:0.038245,Swartschewskia_papyracea_AY662499:0.0):0.0):0.0):0.0,(Lubomirskia_baicalensis_DQ178655:0.0,(Lubomirskia_fusifera_AY662504:0.0,(Baikalospongia_robusta_AY662503:0.0,(Baikalospongia_bacillifera_AY662501:0.0,(Swartschewskia_papyracea_AM950182:0.0,Swartschewskia_papyracea_AM950181:0.0):0.011442):0.0):0.0):0.0):0.0):0.0):0.003175):0.001779):0.003368):0.010394):0.0):0.005004):0.020706):0.0635125); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr44959] END;