#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 21, 2024; 3:07 GMT TreeBASE (cc) 1994-2008 Study reference: Recuero E., Canestrelli D., Vörös J., Szabo K., Poyarkov N., Arntzen J.W., Crnobrnja-isailovic J., Kidov A., Cogalniceanu D., Caputo F.P., Nascetti G., & Martinez-solano I. 2011. Multilocus species tree analyses resolve the radiation of the widespread Bufo bufo species group (Anura, Bufonidae). Molecular Phylogenetics and Evolution, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S11885] BEGIN TAXA; TITLE Bufo_bufo_species_group_samples; DIMENSIONS NTAX=123; TAXLABELS Bufo_bankorensis_BB98 Bufo_bankorensis_BB99 Bufo_bufo_BB01 Bufo_bufo_BB02 Bufo_bufo_BB04 Bufo_bufo_BB107 Bufo_bufo_BB108 Bufo_bufo_BB109 Bufo_bufo_BB111 Bufo_bufo_BB112 Bufo_bufo_BB114 Bufo_bufo_BB125 Bufo_bufo_BB14 Bufo_bufo_BB141 Bufo_bufo_BB15 Bufo_bufo_BB158 Bufo_bufo_BB16 Bufo_bufo_BB167 Bufo_bufo_BB168 Bufo_bufo_BB169 Bufo_bufo_BB17 Bufo_bufo_BB174 Bufo_bufo_BB176 Bufo_bufo_BB177 Bufo_bufo_BB178 Bufo_bufo_BB18 Bufo_bufo_BB19 Bufo_bufo_BB20 Bufo_bufo_BB22 Bufo_bufo_BB23 Bufo_bufo_BB24 Bufo_bufo_BB25 Bufo_bufo_BB26 Bufo_bufo_BB29 Bufo_bufo_BB30 Bufo_bufo_BB32 Bufo_bufo_BB36 Bufo_bufo_BB41 Bufo_bufo_BB46 Bufo_bufo_BB48 Bufo_bufo_BB49 Bufo_bufo_BB50 Bufo_bufo_BB51 Bufo_bufo_BB54 Bufo_bufo_BB70 Bufo_bufo_BB71 Bufo_bufo_BB77 Bufo_bufo_BB79 Bufo_bufo_BB92 Bufo_bufo_JV1 Bufo_bufo_JV5 Bufo_bufo_JV7 Bufo_bufo_JV92 Bufo_bufo_OALB4 Bufo_bufo_OANG10 Bufo_bufo_OANG8 Bufo_bufo_OBEL2 Bufo_bufo_OBRB15 Bufo_bufo_OBYX12 Bufo_bufo_ODOG10 Bufo_bufo_OFAG2 Bufo_bufo_OFAG5 Bufo_bufo_OFOG4 Bufo_bufo_OFOG9 Bufo_bufo_OGAM22 Bufo_bufo_OJEN1 Bufo_bufo_OJEN3 Bufo_bufo_OMAS2 Bufo_bufo_OMAS3 Bufo_bufo_OMOL4 Bufo_bufo_OMON4 Bufo_bufo_ORAG5 Bufo_bufo_OSUB2 Bufo_bufo_OTIZ2 Bufo_bufo_OTIZ3 Bufo_bufo_OVER2 Bufo_bufo_ROM2 Bufo_bufo_SLO5 Bufo_bufo_TURK2A Bufo_bufo_TURK3 Bufo_bufo_TURK4 Bufo_eichwaldi_BB140 Bufo_eichwaldi_BB62 Bufo_eichwaldi_BB84 Bufo_eichwaldi_BB86 Bufo_eichwaldiwaldi_BB91 Bufo_gargarizans_BB94 Bufo_gargarizans_BB96 Bufo_gargarizans_BB97 Bufo_japonicus_BB101 Bufo_japonicus_BB102 Bufo_spinosus_BB03 Bufo_spinosus_BB05 Bufo_spinosus_BB06 Bufo_spinosus_BB10 Bufo_spinosus_BB116 Bufo_spinosus_BB119 Bufo_spinosus_BB120 Bufo_spinosus_BB121 Bufo_spinosus_BB129 Bufo_spinosus_BB13 Bufo_spinosus_BB131 Bufo_spinosus_BB132 Bufo_spinosus_BB133 Bufo_spinosus_BB134 Bufo_spinosus_BB148 Bufo_spinosus_BB150 Bufo_spinosus_BB152 Bufo_spinosus_BB153 Bufo_spinosus_BB155 Bufo_spinosus_BB165 Bufo_spinosus_BB190 Bufo_spinosus_BB192 Bufo_spinosus_MNCN15574 Bufo_spinosus_MNCN15600 Bufo_spinosus_MNCN8003 Bufo_spinosus_OBYX8 Bufo_torrenticola_BB100 Bufo_verrucosissimus_BB57 Bufo_verrucosissimus_BB60 Bufo_verrucosissimus_BB64 Bufo_verrucosissimus_BB83 Bufo_verrucosissimus_BB88 ; END; BEGIN TREES; TITLE Bufo_bufo_combomt_DNA_haplos_consphyl; LINK TAXA = Bufo_bufo_species_group_samples; TREE con_50_majrule = [&R] (((Bufo_eichwaldi_BB62:0.024421,Bufo_eichwaldi_BB86:0.023118,Bufo_eichwaldiwaldi_BB91:0.071448,(Bufo_eichwaldi_BB84:0.022891,Bufo_eichwaldi_BB140:0.021797):0.047613):0.884588,((((((((Bufo_bufo_BB19:0.025213,Bufo_bufo_BB30:0.118115):0.045601,(Bufo_bufo_BB15:0.024411,Bufo_bufo_BB20:0.023556):0.072575,Bufo_bufo_BB25:0.047573,Bufo_bufo_BB24:0.023185):0.049016,(Bufo_bufo_BB02:0.023693,Bufo_bufo_BB04:0.046963,Bufo_bufo_BB141:0.04855):0.140496,(Bufo_bufo_BB46:0.071852,Bufo_bufo_BB167:0.048593,Bufo_bufo_BB169:0.024394):0.141675,(Bufo_bufo_BB49:0.025039,Bufo_bufo_BB168:0.073297,Bufo_bufo_BB174:0.070877):0.138841,(Bufo_bufo_BB16:0.077521,Bufo_bufo_BB17:0.031832):0.140316,Bufo_bufo_ROM2:0.072017,Bufo_bufo_SLO5:0.046574,Bufo_bufo_BB32:0.0229,Bufo_bufo_BB01:0.140001,Bufo_bufo_BB14:0.115735,Bufo_bufo_BB18:0.140407,Bufo_bufo_BB22:0.115786,Bufo_bufo_BB23:0.116595,Bufo_bufo_BB29:0.138597,Bufo_bufo_BB48:0.13910899999999998,Bufo_bufo_BB50:0.14130399999999999,Bufo_bufo_BB51:0.138674,Bufo_bufo_BB54:0.131089,Bufo_bufo_BB77:0.163488,Bufo_bufo_BB79:0.164171,Bufo_bufo_BB92:0.138666,Bufo_bufo_BB125:0.163221,Bufo_bufo_BB158:0.16269699999999998,Bufo_bufo_BB176:0.14152599999999999,Bufo_bufo_BB177:0.117517,Bufo_bufo_BB178:0.116456,Bufo_bufo_JV1:0.14091599999999999,Bufo_bufo_JV5:0.138675,Bufo_bufo_JV7:0.139088,Bufo_bufo_JV92:0.185958):0.081908,((Bufo_bufo_BB70:0.044786,Bufo_bufo_BB71:0.045964,Bufo_bufo_TURK4:0.023354):0.045844,Bufo_bufo_TURK3:0.094879,Bufo_bufo_TURK2A:0.070831,Bufo_bufo_BB109:0.046933):0.051706,Bufo_bufo_OBYX12:0.188597):0.086416,(((Bufo_bufo_BB111:0.049478,Bufo_bufo_BB112:0.071775):0.047139,(Bufo_bufo_BB26:0.071428,Bufo_bufo_BB114:0.024862):0.046319,Bufo_bufo_BB108:0.045638,Bufo_bufo_BB107:0.047713,Bufo_bufo_BB41:0.022139,Bufo_bufo_BB36:0.046678):0.07097,((Bufo_bufo_OBRB15:0.045752,Bufo_bufo_OTIZ2:0.022237,(Bufo_bufo_ODOG10:0.022023,Bufo_bufo_OFOG4:0.045952,Bufo_bufo_OFOG9:0.047255,Bufo_bufo_OJEN3:0.071108,Bufo_bufo_OMON4:0.04831,Bufo_bufo_OSUB2:0.045932,(Bufo_bufo_OJEN1:0.047268,Bufo_bufo_OMOL4:0.047037):0.094229):0.070756):0.045836,Bufo_bufo_OTIZ3:0.071132):0.072231):0.049015):0.094361,((Bufo_bufo_OALB4:0.024583,Bufo_bufo_OGAM22:0.069914,Bufo_bufo_OMAS2:0.046531,Bufo_bufo_OMAS3:0.046412,Bufo_bufo_OVER2:0.047385):0.046633,(Bufo_bufo_OANG10:0.02276,Bufo_bufo_OANG8:0.070741,Bufo_bufo_ORAG5:0.093211,(Bufo_bufo_OBEL2:0.024389,(Bufo_bufo_OFAG2:0.023118,Bufo_bufo_OFAG5:0.046096):0.047533):0.047124):0.049571):0.099908):0.191108,((Bufo_verrucosissimus_BB57:0.023572,Bufo_verrucosissimus_BB83:0.04633,Bufo_verrucosissimus_BB88:0.047265):0.064127,(Bufo_verrucosissimus_BB60:0.024376,Bufo_verrucosissimus_BB64:0.046308):0.095675):0.075439):0.820979,((((((Bufo_spinosus_BB13:0.072977,Bufo_spinosus_BB150:0.024842):0.143213,Bufo_spinosus_BB131:0.047272):0.049003,Bufo_spinosus_BB121:0.12054):0.04913,Bufo_spinosus_MNCN15600:0.057167):0.046079,(Bufo_spinosus_BB06:0.02258,Bufo_spinosus_BB190:0.046334,Bufo_spinosus_BB192:0.022883,Bufo_spinosus_OBYX8:0.04528):0.198991,((Bufo_spinosus_BB03:0.074009,Bufo_spinosus_MNCN8003:0.096124):0.0944,Bufo_spinosus_MNCN15574:0.049147):0.047313,Bufo_spinosus_BB165:0.048889,Bufo_spinosus_BB148:0.046493,Bufo_spinosus_BB134:0.046418,Bufo_spinosus_BB133:0.045693,Bufo_spinosus_BB132:0.048502,Bufo_spinosus_BB129:0.046357,Bufo_spinosus_BB116:0.022336,Bufo_spinosus_BB10:0.070011,Bufo_spinosus_BB05:0.046467):0.650957,((Bufo_spinosus_BB119:0.069708,Bufo_spinosus_BB120:0.025952):0.494762,(Bufo_spinosus_BB152:0.046837,Bufo_spinosus_BB153:0.023772,Bufo_spinosus_BB155:0.046006):0.248774):0.493478):0.711624):0.812517):1.1273265,(((Bufo_gargarizans_BB94:0.156963,(Bufo_gargarizans_BB96:0.048714,Bufo_gargarizans_BB97:0.046167):0.135828):0.608414,(Bufo_bankorensis_BB98:0.048921,Bufo_bankorensis_BB99:0.049664):1.425843):0.828523,(Bufo_torrenticola_BB100:1.195732,(Bufo_japonicus_BB101:0.473768,Bufo_japonicus_BB102:0.433138):0.905194):0.550992):1.1273265); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr48514] END;