#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 17, 2024; 18:41 GMT

TreeBASE (cc) 1994-2008

Study reference:
Recuero E., Canestrelli D., Vörös J., Szabo K., Poyarkov N., Arntzen J.W., Crnobrnja-isailovic
J., Kidov A., Cogalniceanu D., Caputo F.P., Nascetti G., & Martinez-solano
I. 2011. Multilocus species tree analyses resolve the radiation of the
widespread Bufo bufo species group (Anura, Bufonidae). Molecular Phylogenetics and
Evolution, .

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S11885]

BEGIN TAXA;
        TITLE  Bufo_bufo_species_group_nDNA_plus_mtDNA_samples;
        DIMENSIONS NTAX=39;
        TAXLABELS
            Bufo_bankorensis_BB98
            Bufo_bufo_BB02
            Bufo_bufo_BB04
            Bufo_bufo_BB107
            Bufo_bufo_BB128
            Bufo_bufo_BB141
            Bufo_bufo_BB17
            Bufo_bufo_BB33
            Bufo_bufo_BB34
            Bufo_bufo_BB36
            Bufo_bufo_BB46
            Bufo_bufo_BB55
            Bufo_bufo_BB70
            Bufo_bufo_BB80
            Bufo_bufo_OGAM2
            Bufo_bufo_OMON5
            Bufo_bufo_ORAG3
            Bufo_bufo_ORAG5
            Bufo_eichwaldi_BB62
            Bufo_eichwaldi_BB84
            Bufo_eichwaldi_BB86
            Bufo_gargarizans_BB95
            Bufo_japonicus_BB101
            Bufo_spinosus_BB03
            Bufo_spinosus_BB05
            Bufo_spinosus_BB10
            Bufo_spinosus_BB118
            Bufo_spinosus_BB119
            Bufo_spinosus_BB12
            Bufo_spinosus_BB120
            Bufo_spinosus_BB13
            Bufo_spinosus_BB152
            Bufo_spinosus_BB153
            Bufo_torrenticola_BB100
            Bufo_verrucosissimus_BB57
            Bufo_verrucosissimus_BB58
            Bufo_verrucosissimus_BB64
            Bufo_verrucosissimus_BB73
            Bufo_verrucosissimus_BB88
            ;
END;

BEGIN TREES;
      TITLE Bufo_bufo_species_group_combo_nDNA_plus_mtDNA_Bayesian_consensus_phylograms;
      LINK TAXA = Bufo_bufo_species_group_nDNA_plus_mtDNA_samples;
      TREE con_50_majrule = [&R] (((Bufo_eichwaldi_BB62:0.007887,Bufo_eichwaldi_BB84:0.025371,Bufo_eichwaldi_BB86:0.007852):0.386009,((((Bufo_bufo_BB36:0.02569,Bufo_bufo_BB107:0.020467):0.037054,((Bufo_bufo_OGAM2:0.008254,Bufo_bufo_ORAG3:0.014919,Bufo_bufo_ORAG5:0.051172):0.061609,Bufo_bufo_OMON5:0.052003):0.037902,((Bufo_bufo_BB141:0.029739,Bufo_bufo_BB04:0.029325999999999998,Bufo_bufo_BB02:0.021806,Bufo_bufo_BB17:0.014542,Bufo_bufo_BB33:0.007434,Bufo_bufo_BB34:0.00746,Bufo_bufo_BB46:0.029168,Bufo_bufo_BB55:0.014959,Bufo_bufo_BB80:0.022091,Bufo_bufo_BB128:0.007117):0.059414,Bufo_bufo_BB70:0.040602):0.030607):0.075694,((Bufo_verrucosissimus_BB57:0.007547,Bufo_verrucosissimus_BB58:0.007612,Bufo_verrucosissimus_BB88:0.014718):0.022259,(Bufo_verrucosissimus_BB64:0.014994,Bufo_verrucosissimus_BB73:0.007453):0.03089):0.060052):0.385615,(((((Bufo_spinosus_BB03:0.046609,Bufo_spinosus_BB13:0.092229):0.012554,Bufo_spinosus_BB10:0.032456):0.038479,Bufo_spinosus_BB05:0.023648):0.020338,(Bufo_spinosus_BB12:0.007301,Bufo_spinosus_BB118:0.0151):0.055308):0.200529,((Bufo_spinosus_BB119:0.023652,Bufo_spinosus_BB120:0.00826):0.180109,(Bufo_spinosus_BB152:0.022088,Bufo_spinosus_BB153:0.007026):0.073784):0.185381):0.269115):0.29556):0.502036,((Bufo_gargarizans_BB95:0.356588,Bufo_bankorensis_BB98:0.563791):0.223743,(Bufo_torrenticola_BB100:0.420198,Bufo_japonicus_BB101:0.486075):0.257049):0.502036);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr48518]


END;