#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 12, 2024; 16:26 GMT

TreeBASE (cc) 1994-2008

Study reference:
Leigh J., Susko E., Baumgartner M., & Roger A. 2007. Testing Phylogenetic Congruence
in Phylogenomic Analysis. Systematic Biology, 57(1): 104-115.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S1881]

BEGIN TAXA;
        TITLE  '15 congruent genes (concatenated)';
        DIMENSIONS NTAX=22;
        TAXLABELS
            Arabidopsis_thaliana
            Basidiomycota
            Caenorhabditis_elegans
            Chlamydomonas_spp
            Dictyostelium_discoideum
            Drosophila_melanogaster
            Entamoeba_histolytica
            Giardia_intestinalis
            Leishmania_spp
            Liliopsida
            Mammalia
            Mastigamoeba_balamuthi
            Naegleria_gruberi
            Neurospora_crassa
            Plasmodium_falciparum
            Porphyra_spp
            Saccharomyces_cerevisiae
            Sarcocystidae
            Spironucleus_salmonicida
            Stramenopila
            Trichomonas_vaginalis
            Trypanosoma_spp
            ;
END;

BEGIN TREES;
      TITLE Tb8609;
      LINK TAXA = '15 congruent genes (concatenated)';
      TREE Fig._3c = [&R] ((((Arabidopsis_thaliana,Liliopsida),Chlamydomonas_spp),(Stramenopila,Porphyra_spp)),((((Entamoeba_histolytica,Mastigamoeba_balamuthi),(Trichomonas_vaginalis,(Giardia_intestinalis,Spironucleus_salmonicida))),(Sarcocystidae,Plasmodium_falciparum)),((Trypanosoma_spp,Leishmania_spp),Naegleria_gruberi)),((Dictyostelium_discoideum,(Caenorhabditis_elegans,(Drosophila_melanogaster,Mammalia))),(Basidiomycota,(Neurospora_crassa,Saccharomyces_cerevisiae))));
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr4902]


END;