#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on April 27, 2024; 22:12 GMT

TreeBASE (cc) 1994-2008

Study reference:
Hunter R., Webb M., Iliffe T., & Bremer J. 2007. Phylogeny and historical biogeography
of the cave-adapted shrimp genus Typhlatya (Atyidae) in the Caribbean Sea
and western Atlantic. Journal of Biogeography, null.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S1897]

BEGIN TAXA;
        TITLE  Combined_COI_cytb_16S;
        DIMENSIONS NTAX=29;
        TAXLABELS
            Antecaridina_cf._lauensis_MI1
            Antecaridina_cf._lauensis_MI2
            Halocaridina_rubra
            Typhlatya_garciai_BH2_BH3
            Typhlatya_garciai_BH4
            Typhlatya_iliffei_BW10
            Typhlatya_iliffei_BW11
            Typhlatya_iliffei_BW2
            Typhlatya_iliffei_BW3
            Typhlatya_iliffei_BW4
            Typhlatya_iliffei_BW5
            Typhlatya_iliffei_BW6
            Typhlatya_iliffei_CP1
            Typhlatya_iliffei_CP2
            Typhlatya_iliffei_TT3
            Typhlatya_iliffei_TT4
            Typhlatya_iliffei_TT6
            Typhlatya_mitchelli_CW2
            Typhlatya_mitchelli_CW3_CW4
            Typhlatya_mitchelli_K2
            Typhlatya_mitchelli_K3
            Typhlatya_mitchelli_K4
            Typhlatya_mitchelli_N2
            Typhlatya_mitchelli_SJ1_CJ2_CJ3_CJ5
            Typhlatya_mitchelli_SJ2
            Typhlatya_mitchelli_SJ3_SAC2_SAC3
            Typhlatya_pearsei_27_1
            Typhlatya_pearsei_AA3
            Typhlatya_pearsei_SM6
            ;
END;

BEGIN TREES;
      TITLE Tb8650;
      LINK TAXA = Combined_COI_cytb_16S;
      TREE Fig._4 = [&R] ((((Typhlatya_mitchelli_K2,(((Typhlatya_mitchelli_K3,Typhlatya_mitchelli_K4),Typhlatya_mitchelli_SJ2),Typhlatya_mitchelli_N2,Typhlatya_mitchelli_CW2,Typhlatya_mitchelli_CW3_CW4,Typhlatya_mitchelli_SJ1_CJ2_CJ3_CJ5,Typhlatya_mitchelli_SJ3_SAC2_SAC3)),(Typhlatya_pearsei_SM6,(Typhlatya_pearsei_AA3,Typhlatya_pearsei_27_1))),((Typhlatya_garciai_BH2_BH3,Typhlatya_garciai_BH4),(((((Typhlatya_iliffei_CP1,(Typhlatya_iliffei_TT4,Typhlatya_iliffei_BW3)),Typhlatya_iliffei_BW6),((Typhlatya_iliffei_CP2,Typhlatya_iliffei_BW11),Typhlatya_iliffei_BW2),Typhlatya_iliffei_TT6,Typhlatya_iliffei_BW4),Typhlatya_iliffei_BW10,Typhlatya_iliffei_BW5),Typhlatya_iliffei_TT3))),(Antecaridina_cf._lauensis_MI1,Antecaridina_cf._lauensis_MI2),Halocaridina_rubra);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr4918]


END;