#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 18, 2024; 15:10 GMT TreeBASE (cc) 1994-2008 Study reference: Nauheimer L., Boyce P.C., & Renner S.S. 2011. Giant taro and its relatives: A phylogeny of the large genus Alocasia (Araceae) sheds light on miocene floristic exchange in the malesian region. Molecular Phylogenetics and Evolution, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S12182] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=103; TAXLABELS Alocasia_acuminata__Boycesv1_Thailand_LA093 Alocasia_alba__NSW4171562_IndonesiaJava_LA171 Alocasia_argyrea__BGMsn_LA190 Alocasia_atropurpurea__MPM463_Philippines_LA123 Alocasia_beccarii__BoyceAL194_MalaysiaSarawak_LA026 Alocasia_boa__Bogner2621M_NewGuinea_LA001 Alocasia_boyceana__MPM471_Philippines_LA130 Alocasia_brancifolia__Bogner1936M_NewGuinea_LA037 Alocasia_brisbanensis__Bogner2363M_Australia_LA025 Alocasia_chaii__LeeAL41_MalaysiaSarawak_LA046 Alocasia_clypeolata__MPM456_Philippines_LA112 Alocasia_cucullata__Bogner2638M_cultM_LA012 Alocasia_culionensis__MPM360_PhilippinesPalawan_LA088 Alocasia_cuprea__BoyceEtAlAL1_MalaysiaSabah_LA041 Alocasia_denudata__LN098_Singapore_LA181 Alocasia_gageana__MO78364_LA198 Alocasia_grandis__BGM_LA201 Alocasia_heterophylla__MPM460_Philippines_LA111 Alocasia_hollrungii__DCN2668Edinb_NewGuinea_LA216 Alocasia_hypnosa__DPrehsler175_Thailand_LA209 Alocasia_infernalis__LeeAL16_MalaysiaSarawak_LA043 Alocasia_inornata__FRI65175_MalaysiaPeninsula_LA187 Alocasia_korthalsii__LN090_MalaysiaSarawak_LA180 Alocasia_lauterbachiana__Bogner1769M_NewGuinea_LA005 Alocasia_longiloba_1__Bogner2645M_Vietnam_LA006 Alocasia_longiloba_2__BoyceAL193_MalaysiaSarawak_LA029 Alocasia_longiloba_3__BoyceWongAL257_IndonesiaKalimantan_LA090 Alocasia_longiloba_4__DCN2669Edinb_Sulawesi_LA217 Alocasia_lowii__BoyceAl239_MalaysiaSarawak_LA052 Alocasia_macrorrhizos__MPM435_Philippines_LA068 Alocasia_maquilingensis__MPM468_Philippines_LA127 Alocasia_melo__LeeAL61_MalaysiaSabah_LA048 Alocasia_micholitziana__MPM465_Philippines_LA124 Alocasia_monticola__Scherberich761_NewGuinea_LA098 Alocasia_navicularis__CroatDzu78014_LA120_Vietnam Alocasia_nebula__LeeAL23_MalaysiaExcult_LA044 Alocasia_nycteris__MPM458_Philippines_LA115 Alocasia_odora__Boycesv3_Thailand_LA095 Alocasia_pangeran__BoyceEtAlAL6_MalaysiaSabah_LA042 Alocasia_peltata__LN066_MalaysiaSarawak_LA177 Alocasia_perakensis__ELarsen42938AAU_Thailand_LA191 Alocasia_plumbea__Bogner2960M_cultM_LA015 Alocasia_portei__MPM301_Philippines_LA078 Alocasia_princeps__BoyceAL195_MalaysiaSarawak_LA033 Alocasia_principiculus__LN100_MalaysiaSabah_LA182 Alocasia_ramosii__MPM469_Philippines_LA128 Alocasia_reginae__BoyceAL197_MalaysiaSarawak_LA034 Alocasia_reginula__YeoAL24_MalaysiaExcult_LA045 Alocasia_reversa__KiewEtAlAL93_MalaysiaSarawak_LA050 Alocasia_ridleyi__Bogner2735M_MalaysiaSarawak_LA053 Alocasia_robusta_Red_sabah__LN106_MalaysiaSabah_LA188 Alocasia_robusta_Red_sarawak__BoyceAL43_MalaysiaSarawak_LA047 Alocasia_robusta_White_sabah__LN103_MalaysiaSabah_LA203 Alocasia_sanderiana__MPM384_Philippines_LA080 Alocasia_sarawakensis__BoyceAL199_MalaysiaSarawak_LA035 Alocasia_scabriuscula__LN033_MalaysiaSarawak_LA176 Alocasia_scalprum__MPM432_Philippines_LA081 Alocasia_sinuata__MPM391_Philippines_LA082 'Alocasia spnov bo011 BGBO-11 IndonesiaSulawesi LA175' 'Alocasia spnov bo07 BGBO-07 IndonesiaSulawesi LA174' Alocasia_spnov_gomantong__LN102_MalaysiaSabah_LA183 Alocasia_spnov_inopinata__BoyceAL191_MalaysiaSarawak_LA027 'Alocasia spnov kelamensis BGBO-01 IndonesiaKalimantan LA172' Alocasia_spnov_kerby__Kerby183M_MalaysiaSarawak_LA101 Alocasia_spnov_kulat__BoyceAL207_MalaysiaSarawak_LA028 Alocasia_spnov_mpm1__MPM405_Philippines_LA084 Alocasia_spnov_mpm2__MPM399_Philippines_LA085 Alocasia_spnov_mpm3__MPM473_Philippines_LA132 Alocasia_spnov_mpm4__MPM474_Philippines_LA133 Alocasia_spnov_ridleythai__Boycesv4_Thailand_LA096 Alocasia_spnov_sept__Scherberich760_MalaysiaSarawak_LA099 Alocasia_spnov_setiam__LN082_MalaysiaSarawak_LA178 'Alocasia suhirmaniana BGBO-02 IndonesiaSulawesi LA173' Alocasia_warburgii__SeidenschwarzSN_Philippines_LA018 Alocasia_watsoniana__BoyceEtAlAl119_MalaysiaSarawak_LA051 Alocasia_watsoniana__LN084_MalaysiaSarawak_LA179 Alocasia_wongii__LN113_MalaysiaSabah_LA184 Alocasia_zebrina__MPM459_Philippines_LA116 Ariopsis_protanthera__JMurataSn16oct2001_RZCR_Nepal Arisaema_speciosum__HetterscheidSn Arum_italicum__BGMainz20Jul2001 Biarum_davisii__Croat78231 Colocasia_affinis_var_jenningsii__Bogner2652M_Burma_LA038 Colocasia_esculenta__Bogner2958M_cultM_LA020 Colocasia_fallax__Bogner1139M_India_LA039 Colocasia_fontanesii__Bogner2215M_China_LA019 Colocasia_gigantea__Bogner427M_Thailand_LA021 Colocasia_menglaensis__Bogner2274M_Myanmar_LA011 Colocasia_spnov_boyceTh2__Thailand_LA094 Dracunculus_vulgaris__Croat78286 Eminium_spiculatum__BGBonn15031 Helicodiceros_muscivorus__Croat71821 Lazarum_brownii__WHetterscheidHAR43 Pinellia_ternata__JMcClemensSn30Jul2001 Protarum_sechellarum__Bogner2545_LA200 Remusatia_pumila__VainioMattila90201_Nepal_LA054 Remusatia_vivipara__Bogner2982_BGM_LA097 Sauromatum_giganteum__JWWaddickSn20Aug2001 Steudnera_assamica__Bogner2588_Myanmar Steudnera_discolor__Bogner1582 Steudnera_kerrii__Bogner1891 Theriophonum_dalzellii__PBruggemann168 Typhonium_trilobatum__JMurata5 ; END; BEGIN TREES; TITLE ML_phylogram_Figure_3a; LINK TAXA = Taxa; TREE Fig._3a = [&R] (Protarum_sechellarum__Bogner2545_LA200:0.00527091319523277,(Alocasia_hypnosa__DPrehsler175_Thailand_LA209:0.0044189330705635506,((Ariopsis_protanthera__JMurataSn16oct2001_RZCR_Nepal:0.014627747793127813,(Remusatia_vivipara__Bogner2982_BGM_LA097:0.003610343451784074,((Colocasia_esculenta__Bogner2958M_cultM_LA020:0.0015414275389834017,(Colocasia_spnov_boyceTh2__Thailand_LA094:2.574902865321538E-4,(Colocasia_fontanesii__Bogner2215M_China_LA019:6.4740940915357E-7,Colocasia_menglaensis__Bogner2274M_Myanmar_LA011:6.4740940915357E-7)79:6.4740940915357E-7)100:0.0010217877645201077)99:0.0012754218948095122,((Remusatia_pumila__VainioMattila90201_Nepal_LA054:0.003071806819384739,Steudnera_kerrii__Bogner1891:0.0015328276070556617)25:6.4740940915357E-7,(Steudnera_discolor__Bogner1582:0.004204902612993033,(Steudnera_assamica__Bogner2588_Myanmar:0.001286240385486051,(Colocasia_affinis_var_jenningsii__Bogner2652M_Burma_LA038:0.0017157734001183784,Colocasia_fallax__Bogner1139M_India_LA039:0.0018113331053412822)94:8.513569374667339E-4)46:6.4740940915357E-7)80:7.621605344378313E-4)49:2.5382148553418235E-4)21:6.4740940915357E-7)99:0.003005715499507991)96:0.001626550976395522,(((Arisaema_speciosum__HetterscheidSn:0.008888637136498609,Pinellia_ternata__JMcClemensSn30Jul2001:0.009193233702602076)88:7.169155507978032E-4,(Typhonium_trilobatum__JMurata5:0.008796379166189984,(Lazarum_brownii__WHetterscheidHAR43:0.004464019582888868,(Theriophonum_dalzellii__PBruggemann168:0.008095422519404377,(Sauromatum_giganteum__JWWaddickSn20Aug2001:0.0038287092777612316,((Eminium_spiculatum__BGBonn15031:0.006291281466841507,Helicodiceros_muscivorus__Croat71821:0.005311732176644706)45:5.032607107594582E-4,(Biarum_davisii__Croat78231:0.004586455297311152,(Arum_italicum__BGMainz20Jul2001:0.004047962368156801,Dracunculus_vulgaris__Croat78286:0.003301016948994612)67:7.685604407802468E-4)74:7.583823619383527E-4)92:0.0013898687231151537)99:0.0029641778913858017)59:5.665100797695743E-4)47:2.311062255844234E-4)100:0.002505398779639133)99:0.001330823320375522,(Colocasia_gigantea__Bogner427M_Thailand_LA021:0.003145966687473677,((Alocasia_acuminata__Boycesv1_Thailand_LA093:0.00174859558528905,(Alocasia_perakensis__ELarsen42938AAU_Thailand_LA191:0.0028394027907324864,(Alocasia_longiloba_1__Bogner2645M_Vietnam_LA006:0.0012470702785467396,((Alocasia_cucullata__Bogner2638M_cultM_LA012:5.218281182598071E-4,Alocasia_odora__Boycesv3_Thailand_LA095:0.0010169377635606202)72:6.4740940915357E-7,(Alocasia_gageana__MO78364_LA198:7.609614055571808E-4,Alocasia_navicularis__CroatDzu78014_LA120_Vietnam:0.0021750803375679747)62:5.096332178077577E-4)78:8.027650243912478E-4)25:2.508913912990985E-4)20:6.4740940915357E-7)59:0.001063940198139336,(((Alocasia_infernalis__LeeAL16_MalaysiaSarawak_LA043:0.0015438465193559636,'Alocasia spnov kelamensis BGBO-01 IndonesiaKalimantan LA172':7.703877095359712E-4)25:6.4740940915357E-7,(((Alocasia_brancifolia__Bogner1936M_NewGuinea_LA037:2.5797894009821245E-4,Alocasia_lauterbachiana__Bogner1769M_NewGuinea_LA005:3.8228676142422756E-4)79:3.819109642394081E-4,(Alocasia_monticola__Scherberich761_NewGuinea_LA098:0.0012753950287767361,(Alocasia_boa__Bogner2621M_NewGuinea_LA001:6.4740940915357E-7,Alocasia_hollrungii__DCN2668Edinb_NewGuinea_LA216:0.001987310756341802)68:2.555224470997921E-4)21:6.4740940915357E-7)91:0.0012744641967997008,((Alocasia_warburgii__SeidenschwarzSN_Philippines_LA018:8.129423704145853E-4,(Alocasia_boyceana__MPM471_Philippines_LA130:2.5470560353090953E-4,Alocasia_heterophylla__MPM460_Philippines_LA111:5.103396513175092E-4)13:6.4740940915357E-7)41:2.5496798245489997E-4,(Alocasia_clypeolata__MPM456_Philippines_LA112:0.0012758297733029963,('Alocasia spnov bo07 BGBO-07 IndonesiaSulawesi LA174':5.092775990300197E-4,(Alocasia_micholitziana__MPM465_Philippines_LA124:0.0015600416421160856,((Alocasia_atropurpurea__MPM463_Philippines_LA123:6.4740940915357E-7,Alocasia_spnov_mpm2__MPM399_Philippines_LA085:0.0013384462427706184)62:3.013037690411369E-4,((Alocasia_spnov_mpm1__MPM405_Philippines_LA084:2.56108138850407E-4,(Alocasia_spnov_mpm3__MPM473_Philippines_LA132:6.4740940915357E-7,Alocasia_spnov_mpm4__MPM474_Philippines_LA133:6.4740940915357E-7)86:5.09470349545994E-4)11:6.4740940915357E-7,((Alocasia_macrorrhizos__MPM435_Philippines_LA068:5.100425926304607E-4,Alocasia_ramosii__MPM469_Philippines_LA128:2.546613929008562E-4)5:6.4740940915357E-7,(Alocasia_plumbea__Bogner2960M_cultM_LA015:6.4740940915357E-7,(Alocasia_portei__MPM301_Philippines_LA078:2.5551301375763134E-4,(Alocasia_scalprum__MPM432_Philippines_LA081:6.4740940915357E-7,Alocasia_sinuata__MPM391_Philippines_LA082:5.126490453712072E-4)57:6.4740940915357E-7)58:6.4740940915357E-7)34:6.4740940915357E-7)7:6.4740940915357E-7)3:6.4740940915357E-7)18:2.541685210872729E-4)4:6.4740940915357E-7)1:6.4740940915357E-7)22:2.546564239540231E-4)63:5.09944571518265E-4)2:6.4740940915357E-7)1:6.4740940915357E-7,((Alocasia_brisbanensis__Bogner2363M_Australia_LA025:0.0012630955321625776,((Alocasia_zebrina__MPM459_Philippines_LA116:0.002306306056965605,(Alocasia_longiloba_4__DCN2669Edinb_Sulawesi_LA217:0.0014250208253940148,'Alocasia suhirmaniana BGBO-02 IndonesiaSulawesi LA173':0.0020017625721026303)69:5.663757030050648E-4)15:2.5403661492745435E-4,((Alocasia_robusta_White_sabah__LN103_MalaysiaSabah_LA203:6.4740940915357E-7,Alocasia_robusta_Red_sabah__LN106_MalaysiaSabah_LA188:6.4740940915357E-7)100:0.0022711549437940516,(((Alocasia_longiloba_2__BoyceAL193_MalaysiaSarawak_LA029:2.5712395507710383E-4,Alocasia_watsoniana__BoyceEtAlAl119_MalaysiaSarawak_LA051:7.727554349027391E-4)30:6.4740940915357E-7,(Alocasia_korthalsii__LN090_MalaysiaSarawak_LA180:7.752039548971974E-4,Alocasia_watsoniana__LN084_MalaysiaSarawak_LA179:5.092908538669841E-4)12:6.4740940915357E-7)68:2.545239153905532E-4,((Alocasia_longiloba_3__BoyceWongAL257_IndonesiaKalimantan_LA090:2.5452334193730095E-4,Alocasia_peltata__LN066_MalaysiaSarawak_LA177:2.5454560180583906E-4)12:6.4740940915357E-7,(Alocasia_lowii__BoyceAl239_MalaysiaSarawak_LA052:0.0012902483370001655,((Alocasia_ridleyi__Bogner2735M_MalaysiaSarawak_LA053:7.733251818075508E-4,Alocasia_scabriuscula__LN033_MalaysiaSarawak_LA176:2.553181398475421E-4)48:2.54295754800467E-4,(Alocasia_reversa__KiewEtAlAL93_MalaysiaSarawak_LA050:2.5571024772804926E-4,(Alocasia_pangeran__BoyceEtAlAL6_MalaysiaSabah_LA042:7.73293369884951E-4,Alocasia_spnov_inopinata__BoyceAL191_MalaysiaSarawak_LA027:0.0015447848402579082)59:6.4740940915357E-7)35:6.4740940915357E-7)55:2.5454607126497496E-4)7:6.4740940915357E-7)10:6.4740940915357E-7)73:7.655153933932727E-4)8:6.4740940915357E-7)0:2.0575402561546463E-4)0:4.853498163974098E-5,(((Alocasia_beccarii__BoyceAL194_MalaysiaSarawak_LA026:0.0010256118639701889,Alocasia_spnov_setiam__LN082_MalaysiaSarawak_LA178:7.652218938725376E-4)47:2.5419108137782155E-4,(Alocasia_alba__NSW4171562_IndonesiaJava_LA171:0.0010217954675589287,(Alocasia_inornata__FRI65175_MalaysiaPeninsula_LA187:6.2161271917879E-4,(Alocasia_spnov_ridleythai__Boycesv4_Thailand_LA096:5.094839193349273E-4,(Alocasia_argyrea__BGMsn_LA190:3.2685757055139135E-4,(Alocasia_grandis__BGM_LA201:0.0010693496070594514,Alocasia_denudata__LN098_Singapore_LA181:9.636303141005273E-4)66:8.26474678945592E-6)39:6.4740940915357E-7)46:2.36819888567966E-4)65:1.6461676716888E-5)79:7.654609237568382E-4)5:6.4740940915357E-7,(Alocasia_robusta_Red_sarawak__BoyceAL43_MalaysiaSarawak_LA047:0.0023464212009407653,(Alocasia_princeps__BoyceAL195_MalaysiaSarawak_LA033:7.82408108836794E-4,((Alocasia_sanderiana__MPM384_Philippines_LA080:0.0020098464873696104,(Alocasia_culionensis__MPM360_PhilippinesPalawan_LA088:0.00127643491501077,Alocasia_nycteris__MPM458_Philippines_LA115:7.6698752389559E-4)91:5.478542553663109E-4)17:2.5457533149562034E-4,('Alocasia spnov bo011 BGBO-11 IndonesiaSulawesi LA175':7.662427459902432E-4,((Alocasia_cuprea__BoyceEtAlAL1_MalaysiaSabah_LA041:7.6917335031639E-4,(Alocasia_maquilingensis__MPM468_Philippines_LA127:7.650076685808447E-4,Alocasia_spnov_kerby__Kerby183M_MalaysiaSarawak_LA101:5.095905794168785E-4)24:6.4740940915357E-7)58:2.5475752844309927E-4,((Alocasia_spnov_kulat__BoyceAL207_MalaysiaSarawak_LA028:7.737847881581335E-4,(Alocasia_chaii__LeeAL41_MalaysiaSarawak_LA046:0.0010379788081983678,Alocasia_nebula__LeeAL23_MalaysiaExcult_LA044:0.0010267864125908348)14:6.4740940915357E-7)33:6.4740940915357E-7,(Alocasia_spnov_sept__Scherberich760_MalaysiaSarawak_LA099:5.096631322846866E-4,(Alocasia_reginae__BoyceAL197_MalaysiaSarawak_LA034:0.0012938503934860973,(Alocasia_melo__LeeAL61_MalaysiaSabah_LA048:2.5762106849958895E-4,(Alocasia_sarawakensis__BoyceAL199_MalaysiaSarawak_LA035:7.884844622604066E-4,(Alocasia_spnov_gomantong__LN102_MalaysiaSabah_LA183:2.5474812408172846E-4,(Alocasia_principiculus__LN100_MalaysiaSabah_LA182:6.4740940915357E-7,(Alocasia_reginula__YeoAL24_MalaysiaExcult_LA045:0.0015440624282620284,Alocasia_wongii__LN113_MalaysiaSabah_LA184:2.5665188240530545E-4)43:6.4740940915357E-7)27:6.4740940915357E-7)68:2.5274061280209926E-4)17:6.4740940915357E-7)30:6.4740940915357E-7)57:6.4740940915357E-7)7:6.4740940915357E-7)11:6.4740940915357E-7)68:2.546280475048506E-4)94:9.9073747008088E-4)41:2.8617966322014955E-4)46:5.097125571586277E-4)15:2.541136500350159E-4)4:6.4740940915357E-7)2:2.541998294679366E-4)93:0.0012774283095551764)100:0.003830965207105955)100:0.0014959553055568227)90:5.667589228201787E-4)75:3.858437464643257E-4):0.00527091319523277); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr50060] END;