#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 22, 2024; 8:59 GMT TreeBASE (cc) 1994-2008 Study reference: Manzanilla V., & Bruneau A. 2012. Phylogeny reconstruction in the Caesalpinieae grade (Leguminosae) based on duplicated copies of the sucrose synthase gene and plastid markers. Molecular Phylogenetics and Evolution, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S12746] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=91; TAXLABELS Acrocarpus_fraxinifolius_SUSY1 Acrocarpus_fraxinifolius_SUSY2 Arcoa_gonavensis_SUSY1 Arcoa_gonavensis_SUSY2 Balsamocarpon_brevifolium_SUSY1 Balsamocarpon_brevifolium_SUSY2 Bussea_occidentalis_SUSY1 Bussea_occidentalis_SUSY2 Caesalpinia_cacalaco_SUSY1 Caesalpinia_ferrea_SUSY1 Caesalpinia_gracilis_SUSY1 Caesalpinia_gracilis_SUSY2 Caesalpinia_violacea_SUSY1 Caesalpinia_yucatanensis_SUSY1 Caesalpinia_yucatanensis_SUSY2 Calpocalyx_dinklagei_SUSY1 Calpocalyx_dinklagei_SUSY2 Campsiandra_comosa_SUSY1 Campsiandra_comosa_SUSY2 Cassia_javanica_SUSY2 Cenostigma_gardnerianum_SUSY1 Ceratonia_siliqua_SUSY1 Ceratonia_siliqua_SUSY2 Chamaecrista_nictitans_SUSY1 Chamaecrista_nictitans_SUSY2 Colvillea_racemosa_SUSY1 Colvillea_racemosa_SUSY2 Conzattia_multiflora_SUSY2 Cylicodiscus_gabunensis_SUSY1 Cylicodiscus_gabunensis_SUSY2 Delonix_elata_SUSY1 Delonix_elata_SUSY2 Delonix_regia_SUSY1 Delonix_regia_SUSY2 Dialium_guianense_SUSY1 Dimorphandra_conjugata_SUSY2 Diptychandra_aurantiaca_SUSY1 Diptychandra_aurantiaca_SUSY2 Dussia_tessmannii_SUSY1 Entada_polyphylla_SUSY2 Erythrophleum_ivorense_SUSY2 Erythrophleum_suaveolens_SUSY1 Erythrophleum_suaveolens_SUSY2 Erythrostemon_gilliesii_SUSY1 Erythrostemon_gilliesii_SUSY2 Gleditsia_caspica_SUSY1 Gleditsia_caspica_SUSY2 Glycine_max_SUSY1 Gymnocladus_dioica_SUSY1 Gymnocladus_dioica_SUSY2 Haematoxylum_brasiletto_SUSY1 Hoffmannseggia_glauca_SUSY1 Koompassia_excelsa_SUSY1 Lemuropisum_edule_SUSY1 Medicago_sativa_SUSY1 Medicago_truncatula_SUSY1 Melanoxylon_brauna_SUSY1 Mezoneuron_angolense_SUSY1 Mezoneuron_kauaiense_SUSY1 Moldenhawera_floribunda_SUSY1 Moldenhawera_floribunda_SUSY2 Mora_gonggrijpii_SUSY1 Pachyelasma_tessmannii_SUSY1 Pachyelasma_tessmannii_SUSY2 Parkinsonia_aculeata_SUSY1 Parkinsonia_aculeata_SUSY2 Peltophorum_dubium_SUSY1 Peltophorum_dubium_SUSY2 Peltophorum_pterocarpum_SUSY1 Peltophorum_pterocarpum_SUSY2 Pentaclethra_macrophylla_SUSY1 Phaseolus_vulgaris_SUSY1 Piptadenia_anolidurus_SUSY2 Pisum_sativum_SUSY1 Pterogyne_nitens_SUSY1 Pterolobium_stellatum_SUSY1 Recordoxylon_amazonicum_SUSY1 Schizolobium_parahyba_SUSY1 Schizolobium_parahyba_SUSY2 Senna_spectabilis_SUSY1 Senna_spectabilis_SUSY2 Stuhlmannia_moavi_SUSY1 Stuhlmannia_moavi_SUSY2 Tachigali_sp._SUSY2 Tetrapterocarpon_geayi_SUSY1 Umtiza_listeriana_SUSY1 Umtiza_listeriana_SUSY2 Vicia_faba_SUSY1 Vigna_radiata_SUSY1 Vouacapoua_macropetala_SUSY1 Vouacapoua_macropetala_SUSY2 ; END; BEGIN TREES; TITLE Fig._1_result; LINK TAXA = Taxa; TREE Fig._1 = [&R] ((Acrocarpus_fraxinifolius_SUSY1:0.088045,Tetrapterocarpon_geayi_SUSY1:0.101796):0.035036,(Ceratonia_siliqua_SUSY1:0.239701,(Arcoa_gonavensis_SUSY1:0.134715,(Umtiza_listeriana_SUSY1:0.122335,(Gleditsia_caspica_SUSY1:0.074822,Gymnocladus_dioica_SUSY1:0.043543):0.026959):0.050019,((Diptychandra_aurantiaca_SUSY1:0.214359,Erythrophleum_suaveolens_SUSY1:0.097522,(Campsiandra_comosa_SUSY1:0.112677,(Mora_gonggrijpii_SUSY1:0.130972,Pachyelasma_tessmannii_SUSY1:0.085632):0.023586):0.015283,((Calpocalyx_dinklagei_SUSY1:0.1425,Cylicodiscus_gabunensis_SUSY1:0.0931,Pentaclethra_macrophylla_SUSY1:0.112691):0.072613,(Moldenhawera_floribunda_SUSY1:0.141134,(Bussea_occidentalis_SUSY1:0.091701,(Peltophorum_dubium_SUSY1:0.035181,Peltophorum_pterocarpum_SUSY1:0.019619):0.121184):0.052275,(Parkinsonia_aculeata_SUSY1:0.04904,(Schizolobium_parahyba_SUSY1:0.14087,(Colvillea_racemosa_SUSY1:0.033862,(Delonix_elata_SUSY1:0.028168,Delonix_regia_SUSY1:0.035133,Lemuropisum_edule_SUSY1:0.088026):0.014884):0.039367):0.029803):0.034903):0.023233):0.032151):0.027082,((Haematoxylum_brasiletto_SUSY1:0.156558,((Chamaecrista_nictitans_SUSY1:0.319355,Pterogyne_nitens_SUSY1:0.459119,Senna_spectabilis_SUSY1:0.135845):0.060634,(Melanoxylon_brauna_SUSY1:0.108946,(Recordoxylon_amazonicum_SUSY1:0.011656,Vouacapoua_macropetala_SUSY1:0.00596):0.026376):0.050837):0.042659):0.044947,(Stuhlmannia_moavi_SUSY1:0.107813,((Caesalpinia_yucatanensis_SUSY1:0.057892,Erythrostemon_gilliesii_SUSY1:0.055346):0.040139,(Balsamocarpon_brevifolium_SUSY1:0.058785,Caesalpinia_ferrea_SUSY1:0.094787,Hoffmannseggia_glauca_SUSY1:0.151033):0.026235):0.048028,((Caesalpinia_cacalaco_SUSY1:0.072162,(Caesalpinia_gracilis_SUSY1:0.011601,Caesalpinia_violacea_SUSY1:0.023852):0.098801):0.037438,(Pterolobium_stellatum_SUSY1:0.046105,(Mezoneuron_angolense_SUSY1:0.03236,(Cenostigma_gardnerianum_SUSY1:0.02356,Mezoneuron_kauaiense_SUSY1:0.006128):0.034254):0.024407):0.068284):0.053972):0.084642):0.045432):0.096822,((Dussia_tessmannii_SUSY1:0.052569,((Glycine_max_SUSY1:0.160603,(Phaseolus_vulgaris_SUSY1:0.127542,Vigna_radiata_SUSY1:0.073741):0.123045):0.182389,((Medicago_sativa_SUSY1:0.009537,Medicago_truncatula_SUSY1:0.044654):0.099979,(Pisum_sativum_SUSY1:0.067419,Vicia_faba_SUSY1:0.097821):0.0836):0.100025):0.172268):0.064224,((Dialium_guianense_SUSY1:0.090996,Koompassia_excelsa_SUSY1:0.034451):0.081393,((Acrocarpus_fraxinifolius_SUSY2:0.076693,Arcoa_gonavensis_SUSY2:0.079515,Ceratonia_siliqua_SUSY2:0.032718,(Umtiza_listeriana_SUSY2:0.037446,(Gleditsia_caspica_SUSY2:0.027724,Gymnocladus_dioica_SUSY2:0.06305):0.012339):0.053):0.024256,(((Senna_spectabilis_SUSY2:0.118188,(Cassia_javanica_SUSY2:0.081212,(Chamaecrista_nictitans_SUSY2:0.271895,Vouacapoua_macropetala_SUSY2:0.109677):0.047115):0.031198):0.042859,(Stuhlmannia_moavi_SUSY2:0.041854,(Caesalpinia_gracilis_SUSY2:0.102341,(Balsamocarpon_brevifolium_SUSY2:0.070612,(Caesalpinia_yucatanensis_SUSY2:0.058461,Erythrostemon_gilliesii_SUSY2:0.031248):0.027948):0.051059):0.053696):0.099447):0.042931,(Campsiandra_comosa_SUSY2:0.052293,Dimorphandra_conjugata_SUSY2:0.108536,Moldenhawera_floribunda_SUSY2:0.241741,Pachyelasma_tessmannii_SUSY2:0.011291,Tachigali_sp._SUSY2:0.073176,(Erythrophleum_ivorense_SUSY2:0.005569,Erythrophleum_suaveolens_SUSY2:0.005723):0.015853,(Diptychandra_aurantiaca_SUSY2:0.079437,((Calpocalyx_dinklagei_SUSY2:0.077849,Entada_polyphylla_SUSY2:0.188292):0.037164,(Cylicodiscus_gabunensis_SUSY2:0.063547,Piptadenia_anolidurus_SUSY2:0.107191):0.074542):0.039399):0.01818,(Bussea_occidentalis_SUSY2:0.070815,(Peltophorum_dubium_SUSY2:0.03222,Peltophorum_pterocarpum_SUSY2:0.061422):0.076849,(Schizolobium_parahyba_SUSY2:0.03592,(Parkinsonia_aculeata_SUSY2:0.048353,(Colvillea_racemosa_SUSY2:0.023179,Conzattia_multiflora_SUSY2:0.035214,Delonix_elata_SUSY2:0.023523,Delonix_regia_SUSY2:0.011562):0.059755):0.021701):0.054854):0.051044):0.031146):0.08779):0.052834):0.039076):0.085801):0.081012):0.035036); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr53000] END;