#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 19, 2024; 9:45 GMT TreeBASE (cc) 1994-2008 Study reference: Phillips A.J., Lopes J., Abdollahzadeh J., Bobev S., & Alves A. 2012. Resolving species complexes in Diplodia occurring on apple and other Rosaceae hosts. Persoonia, . TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S12819] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=77; TAXLABELS Botryosphaeria_tsugae_CBS418.64 Diplodia_africana_CBS120835 Diplodia_africana_CBS121104 Diplodia_alatafructa_CBS124931 Diplodia_alatafructa_CBS124932 Diplodia_alatafructa_CBS124933 Diplodia_bulgarica_CBS124135 Diplodia_bulgarica_CBS124136 Diplodia_bulgarica_IRAN1530C Diplodia_bulgarica_IRAN1532C Diplodia_bulgarica_IRAN1548C Diplodia_corticola_CBS112547 Diplodia_corticola_CBS112549 Diplodia_cupressi_CBS168.87 Diplodia_cupressi_CBS261.85 Diplodia_intermedia_CAA147 Diplodia_intermedia_CBS112556 Diplodia_intermedia_CBS124134 Diplodia_intermedia_CBS124462 Diplodia_intermedia_IRAN1559C Diplodia_malorum_CAP265 Diplodia_malorum_CAP266 Diplodia_malorum_CAP267 Diplodia_malorum_CAP268 Diplodia_malorum_CAP269 Diplodia_malorum_CAP270 Diplodia_malorum_CAP272 Diplodia_malorum_CAP275 Diplodia_malorum_CAP277 Diplodia_malorum_CAP278 Diplodia_malorum_CAP340 Diplodia_malorum_CAP341 Diplodia_malorum_CBS112554 Diplodia_malorum_CBS124130 Diplodia_malorum_CBS124253 Diplodia_malorum_CBS124254 Diplodia_mutila_CBS112553 Diplodia_mutila_CBS230.30 Diplodia_olivarum_CAP222 Diplodia_olivarum_CAP224 Diplodia_olivarum_CAP225 Diplodia_olivarum_CAP257 Diplodia_olivarum_CAP301 Diplodia_olivarum_CBS121887 Diplodia_pinea_CAP166 Diplodia_pinea_CAP168 Diplodia_pinea_CAP169 Diplodia_pinea_CAP339 Diplodia_pinea_CBS109725 Diplodia_pinea_CBS109727 Diplodia_pinea_CBS109943 Diplodia_pinea_CBS393.84 Diplodia_pseudoseriata_CBS124906 Diplodia_pseudoseriata_CBS124907 Diplodia_pseudoseriata_UY107 Diplodia_pseudoseriata_UY1263 Diplodia_rosulata_CBS116470 Diplodia_rosulata_CBS116472 Diplodia_scrobiculata_CAP163 Diplodia_scrobiculata_CBS109944 Diplodia_scrobiculata_CBS113423 Diplodia_scrobiculata_CMW189 Diplodia_seriata_CAP154 Diplodia_seriata_CAP171 Diplodia_seriata_CAP205 Diplodia_seriata_CAP217 Diplodia_seriata_CAP220 Diplodia_seriata_CAP276 Diplodia_seriata_CAP337 Diplodia_seriata_CAP338 Diplodia_seriata_CBS112555 Diplodia_seriata_CBS119049 Diplodia_seriata_CBS124137 Diplodia_seriata_CBS124138 Diplodia_sp._CAP330 Lasiodiplodia_theobromae_CBS124.13 Lasiodiplodia_theobromae_CBS164.96 ; END; BEGIN TREES; TITLE MP_result_from_Diplodia_ITS_EF_alignment; LINK TAXA = Taxa; TREE PAUP_500 = [&R] (Lasiodiplodia_theobromae_CBS164.96:0.0,Lasiodiplodia_theobromae_CBS124.13:0.0,((Diplodia_corticola_CBS112547:1.0,Diplodia_corticola_CBS112549:1.0):34.0,(((((((Diplodia_mutila_CBS112553:0.0,Diplodia_mutila_CBS230.30:1.0):4.0,(Diplodia_rosulata_CBS116472:0.0,Diplodia_rosulata_CBS116470:0.0):12.0):2.0,(Diplodia_olivarum_CAP222:0.0,Diplodia_olivarum_CAP224:0.0,Diplodia_olivarum_CAP225:0.0,Diplodia_olivarum_CAP301:0.0,(Diplodia_olivarum_CBS121887:0.0,Diplodia_olivarum_CAP257:0.0):1.0):3.0):1.0,(Diplodia_africana_CBS120835:0.0,Diplodia_africana_CBS121104:0.0):4.0):2.0,(((Diplodia_malorum_CAP275:0.0,Diplodia_malorum_CAP277:0.0,Diplodia_malorum_CBS124253:0.0,Diplodia_malorum_CAP272:0.0,Diplodia_malorum_CAP266:0.0):1.0,Diplodia_malorum_CAP341:0.0,Diplodia_malorum_CAP265:0.0,Diplodia_malorum_CAP267:0.0,Diplodia_malorum_CAP268:0.0,Diplodia_malorum_CAP269:0.0,Diplodia_malorum_CAP340:0.0,Diplodia_malorum_CAP278:0.0,Diplodia_malorum_CAP270:0.0,Diplodia_malorum_CBS124130:0.0):1.0,Diplodia_malorum_CBS112554:1.0):7.0):10.0,((((Diplodia_seriata_CBS124138:0.0,Diplodia_seriata_CAP337:0.0,Diplodia_seriata_CAP338:0.0,Diplodia_seriata_CAP154:1.0,Diplodia_seriata_CBS124137:0.0,Diplodia_seriata_CAP220:0.0,Diplodia_seriata_CAP217:0.0,Diplodia_seriata_CAP171:0.0,Diplodia_seriata_CBS112555:0.0,Diplodia_seriata_CAP276:1.0):1.0,Diplodia_seriata_CBS119049:0.0,Diplodia_seriata_CAP205:0.0):1.0,(((((Diplodia_intermedia_CBS112556:0.0,Diplodia_intermedia_CBS124462:0.0):0.0,(Diplodia_intermedia_CAA147:0.0,Diplodia_intermedia_CBS124134:0.0,Diplodia_intermedia_IRAN1559C:0.0):2.0):2.0,Diplodia_sp._CAP330:2.0):1.0,((Diplodia_scrobiculata_CAP163:0.0,Diplodia_scrobiculata_CMW189:3.0):2.0,(Diplodia_scrobiculata_CBS109944:0.0,Diplodia_scrobiculata_CBS113423:0.0):3.0):4.0):1.0,((Diplodia_pinea_CAP168:0.0,Diplodia_pinea_CAP169:0.0):1.0,Diplodia_pinea_CAP339:0.0,Diplodia_pinea_CAP166:0.0,Diplodia_pinea_CBS393.84:0.0,Diplodia_pinea_CBS109727:0.0,(Diplodia_pinea_CBS109725:0.0,Diplodia_pinea_CBS109943:0.0):1.0):1.0):3.0):3.0,((((((Diplodia_alatafructa_CBS124931:0.0,Diplodia_alatafructa_CBS124932:1.0):3.0,Diplodia_pseudoseriata_UY1263:4.0):1.0,Diplodia_pseudoseriata_UY107:5.0):2.0,Diplodia_pseudoseriata_CBS124906:0.0):2.0,Diplodia_alatafructa_CBS124933:1.0):2.0,Diplodia_pseudoseriata_CBS124907:1.0):13.0):20.0):14.0,((Diplodia_bulgarica_IRAN1532C:0.0,Diplodia_bulgarica_IRAN1548C:0.0,Diplodia_bulgarica_IRAN1530C:0.0,Diplodia_malorum_CBS124254:0.0,Diplodia_bulgarica_CBS124135:0.0,Diplodia_bulgarica_CBS124136:0.0):9.0,((Diplodia_cupressi_CBS261.85:0.0,Diplodia_cupressi_CBS168.87:0.0):12.0,Botryosphaeria_tsugae_CBS418.64:13.0):5.0):10.0):13.0):53.0); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr53386] END;