#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 17, 2024; 12:21 GMT

TreeBASE (cc) 1994-2008

Study reference:
Corn P., Goebel A., Olmstead R., & Ranker T. 2008. Mitochondrial DNA Evolution in
the Anaxyrus boreas Species Group. Molecular Phylogenetics and Evolution, null.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S2184]

BEGIN TAXA;
        TITLE  Control_Region;
        DIMENSIONS NTAX=59;
        TAXLABELS
            Anaxyrus_boreas_boreas_002SuBC
            Anaxyrus_boreas_boreas_005SuBC
            Anaxyrus_boreas_boreas_007SuBC
            Anaxyrus_boreas_boreas_030SuCO
            Anaxyrus_boreas_boreas_033RRMT
            Anaxyrus_boreas_boreas_100BoCO
            Anaxyrus_boreas_boreas_106TeWY
            Anaxyrus_boreas_boreas_109TeWY
            Anaxyrus_boreas_boreas_112TCWA
            Anaxyrus_boreas_boreas_138LaCO
            Anaxyrus_boreas_boreas_188ChCO
            Anaxyrus_boreas_boreas_233GuCO
            Anaxyrus_boreas_boreas_246DeOR
            Anaxyrus_boreas_boreas_248DeOR
            Anaxyrus_boreas_boreas_252DeOR
            Anaxyrus_boreas_boreas_253DeOR
            Anaxyrus_boreas_boreas_255DeOR
            Anaxyrus_boreas_boreas_257LaCO
            Anaxyrus_boreas_boreas_261BHMT
            Anaxyrus_boreas_boreas_272NPID
            Anaxyrus_boreas_boreas_281LaCO
            Anaxyrus_boreas_boreas_297KaUT
            Anaxyrus_boreas_boreas_332SuUT
            Anaxyrus_boreas_boreas_355VCCn
            Anaxyrus_boreas_boreas_356VCCn
            Anaxyrus_boreas_boreas_400BEUT
            Anaxyrus_boreas_boreas_403BEUT
            Anaxyrus_boreas_boreas_410SkWA
            Anaxyrus_boreas_boreas_411SkWA
            Anaxyrus_boreas_boreas_415SkWA
            Anaxyrus_boreas_boreas_488RaMT
            Anaxyrus_boreas_boreas_493KaUT
            Anaxyrus_boreas_boreas_496RaMT
            Anaxyrus_boreas_boreas_536WaID
            Anaxyrus_boreas_boreas_548ElNV
            Anaxyrus_boreas_boreas_549ElNV
            Anaxyrus_boreas_boreas_566ChAK
            Anaxyrus_boreas_boreas_586GlMT
            Anaxyrus_boreas_boreas_659BEUT
            Anaxyrus_boreas_halophilus_014InCA
            Anaxyrus_boreas_halophilus_015InCA
            Anaxyrus_boreas_halophilus_018CCCA
            Anaxyrus_boreas_halophilus_019CCCA
            Anaxyrus_boreas_halophilus_021CCCA
            Anaxyrus_boreas_halophilus_023VeCA
            Anaxyrus_boreas_halophilus_116SBCA
            Anaxyrus_boreas_halophilus_135SBCA
            Anaxyrus_boreas_halophilus_152LACA
            Anaxyrus_boreas_halophilus_603SDCA
            Anaxyrus_boreas_halophilus_605SDCA
            Anaxyrus_canorus_329MoCA
            Anaxyrus_canorus_696YoCA
            Anaxyrus_canorus_698YoCA
            Anaxyrus_canorus_699SeCA
            Anaxyrus_canorus_700SeCA
            Anaxyrus_canorus_701SeCA
            Anaxyrus_canorus_boreas_hybrid_292AlCA
            Anaxyrus_exsul_327InCA
            Anaxyrus_nelsoni_168NyNV
            ;
END;

BEGIN TREES;
      TITLE Tb9327;
      LINK TAXA = Control_Region;
      TREE Fig._3_Unrooted = [&R] (Anaxyrus_exsul_327InCA,(((Anaxyrus_boreas_boreas_297KaUT,Anaxyrus_boreas_boreas_493KaUT),((Anaxyrus_boreas_boreas_400BEUT,Anaxyrus_boreas_boreas_403BEUT,Anaxyrus_boreas_boreas_549ElNV),(Anaxyrus_boreas_boreas_332SuUT,(Anaxyrus_boreas_boreas_138LaCO,Anaxyrus_boreas_boreas_188ChCO,Anaxyrus_boreas_boreas_030SuCO,Anaxyrus_boreas_boreas_233GuCO),Anaxyrus_boreas_boreas_281LaCO,Anaxyrus_boreas_boreas_257LaCO,Anaxyrus_boreas_boreas_100BoCO)))Anaxyrus_E_mtDNA_clade,(((Anaxyrus_boreas_boreas_548ElNV,Anaxyrus_boreas_boreas_252DeOR,Anaxyrus_canorus_boreas_hybrid_292AlCA),(Anaxyrus_canorus_329MoCA,Anaxyrus_canorus_696YoCA)),Anaxyrus_boreas_boreas_255DeOR,Anaxyrus_boreas_boreas_002SuBC,((Anaxyrus_boreas_boreas_356VCCn,Anaxyrus_boreas_boreas_005SuBC,Anaxyrus_boreas_boreas_007SuBC),Anaxyrus_boreas_boreas_355VCCn),Anaxyrus_boreas_boreas_253DeOR,((Anaxyrus_boreas_boreas_272NPID,Anaxyrus_boreas_boreas_488RaMT),(Anaxyrus_boreas_boreas_659BEUT,Anaxyrus_boreas_boreas_033RRMT,(Anaxyrus_boreas_boreas_112TCWA,Anaxyrus_boreas_boreas_536WaID),(Anaxyrus_boreas_boreas_261BHMT,Anaxyrus_boreas_boreas_109TeWY,Anaxyrus_boreas_boreas_106TeWY,Anaxyrus_boreas_boreas_496RaMT)),Anaxyrus_boreas_boreas_586GlMT),(((Anaxyrus_boreas_boreas_246DeOR,(Anaxyrus_boreas_halophilus_019CCCA,Anaxyrus_boreas_halophilus_021CCCA,Anaxyrus_boreas_halophilus_018CCCA,Anaxyrus_boreas_halophilus_116SBCA)),(Anaxyrus_boreas_boreas_410SkWA,Anaxyrus_boreas_boreas_415SkWA)),Anaxyrus_boreas_boreas_248DeOR),Anaxyrus_boreas_boreas_411SkWA,Anaxyrus_boreas_boreas_566ChAK)Anaxyrus_NW_mt_DNA_clade)Anaxyrus_polytomy_NW_E_SW,(((Anaxyrus_nelsoni_168NyNV,(Anaxyrus_boreas_halophilus_014InCA,Anaxyrus_boreas_halophilus_015InCA),(Anaxyrus_boreas_halophilus_152LACA,(Anaxyrus_boreas_halophilus_135SBCA,Anaxyrus_boreas_halophilus_023VeCA),(Anaxyrus_boreas_halophilus_603SDCA,Anaxyrus_boreas_halophilus_605SDCA))),Anaxyrus_canorus_699SeCA),(Anaxyrus_canorus_698YoCA,Anaxyrus_canorus_701SeCA),Anaxyrus_canorus_700SeCA));
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr5371]


END;