#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 17, 2024; 8:14 GMT

TreeBASE (cc) 1994-2008

Study reference:
Corn P., Goebel A., Olmstead R., & Ranker T. 2008. Mitochondrial DNA Evolution in
the Anaxyrus boreas Species Group. Molecular Phylogenetics and Evolution, null.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S2184]

BEGIN TAXA;
        TITLE  'Rooting with outgroups, CR, COI, 12S';
        DIMENSIONS NTAX=40;
        TAXLABELS
            Anaxyrus_americanus_Canada
            Anaxyrus_boreas_boreas_109TeWY
            Anaxyrus_boreas_boreas_112TCWA
            Anaxyrus_boreas_boreas_138LaCO
            Anaxyrus_boreas_boreas_233GuCO
            Anaxyrus_boreas_boreas_246DeOR
            Anaxyrus_boreas_boreas_248DeOR
            Anaxyrus_boreas_boreas_272NPID
            Anaxyrus_boreas_boreas_295KaUT
            Anaxyrus_boreas_boreas_297KaUT
            Anaxyrus_boreas_boreas_332SuUT
            Anaxyrus_boreas_boreas_355VCCn
            Anaxyrus_boreas_boreas_400BEUT
            Anaxyrus_boreas_halophilus_014InCA
            Anaxyrus_boreas_halophilus_023VeCA
            Anaxyrus_boreas_halophilus_603SDCA
            Anaxyrus_californicus_CA
            Anaxyrus_canorus_293AlCA
            Anaxyrus_canorus_328MoCA
            Anaxyrus_canorus_329MoCA
            Anaxyrus_cognatus_NE
            Anaxyrus_debilis_AZ
            Anaxyrus_exsul_326InCA
            Anaxyrus_exsul_327InCA
            Anaxyrus_hemiophrys_Canada
            Anaxyrus_houstonensis_TX
            Anaxyrus_microscaphus_NV
            Anaxyrus_nelsoni_167NyNV
            Anaxyrus_nelsoni_168NyNV
            Anaxyrus_punctatus_AZ
            Anaxyrus_quercicus_SC
            Anaxyrus_retiformis_AZ
            Anaxyrus_speciosus_NM
            Anaxyrus_terrestris_MS
            Anaxyrus_woodhousii_CO
            Chaunus_beebei
            Chaunus_marinus_Mexico
            Chaunus_marinus_Peru
            Ollotis_alvarius
            Ollotis_mazatlanensis
            ;
END;

BEGIN TREES;
      TITLE Tb9332;
      LINK TAXA = 'Rooting with outgroups, CR, COI, 12S';
      TREE Fig._6_Rooted_with_18_outgroups = [&R] (((((Anaxyrus_boreas_boreas_297KaUT,(Anaxyrus_boreas_boreas_400BEUT,((Anaxyrus_boreas_boreas_332SuUT,Anaxyrus_boreas_boreas_138LaCO),Anaxyrus_boreas_boreas_233GuCO))),((Anaxyrus_boreas_boreas_355VCCn,(Anaxyrus_boreas_boreas_272NPID,(Anaxyrus_boreas_boreas_112TCWA,Anaxyrus_boreas_boreas_109TeWY)),Anaxyrus_canorus_329MoCA),(Anaxyrus_boreas_boreas_246DeOR,Anaxyrus_boreas_boreas_248DeOR))),(Anaxyrus_exsul_326InCA,Anaxyrus_exsul_327InCA)),(Anaxyrus_nelsoni_168NyNV,Anaxyrus_boreas_halophilus_014InCA,Anaxyrus_boreas_halophilus_603SDCA)),((((Chaunus_marinus_Mexico,Chaunus_marinus_Peru),Chaunus_beebei)Anaxyrus_root_in_tree,(Ollotis_mazatlanensis,Ollotis_alvarius)),(((((((((Anaxyrus_hemiophrys_Canada,(Anaxyrus_americanus_Canada,Anaxyrus_houstonensis_TX)),Anaxyrus_woodhousii_CO),Anaxyrus_terrestris_MS),(Anaxyrus_microscaphus_NV,Anaxyrus_californicus_CA)),Anaxyrus_cognatus_NE),Anaxyrus_speciosus_NM),Anaxyrus_quercicus_SC),(Anaxyrus_debilis_AZ,Anaxyrus_retiformis_AZ)),Anaxyrus_punctatus_AZ)));
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr5377]


END;