#NEXUS

[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on May 21, 2024; 22:38 GMT

TreeBASE (cc) 1994-2008

Study reference:
Nagel J.H., Gryzenhout M., Slippers B., Wingfield M.J., Hardy G.E., Stukely M., &
Burgess T.I. 2013. Characterization of Phytophthora hybrids from ITS clade 6 associated
with riparian ecosystems in South Africa and Australia. Fungal Biology,
.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S12996]

BEGIN TAXA;
        TITLE  Taxa;
        DIMENSIONS NTAX=35;
        TAXLABELS
            Phytophthora_amnicola_x_Phytophthora_taxon_PgChlamydo_CMW37727_PG
            Phytophthora_amnicola_x_Phytophthora_taxon_PgChlamydo_CMW37729_PG
            Phytophthora_amnicola_x_Phytophthora_taxon_PgChlamydo_CMW37730_PG
            Phytophthora_amnicola_x_Phytophthora_taxon_PgChlamydo_MUCC774_PG
            Phytophthora_fluvialis_CBS129424
            Phytophthora_fluvialis_MUCC772
            Phytophthora_fragariae_PFF309_DQ092858
            Phytophthora_gonapodyides_MUCC761
            Phytophthora_gonapodyides_MUCC776
            Phytophthora_litoralis_VHS17085
            Phytophthora_litoralis_VHS20763
            Phytophthora_megasperma_DDS3432
            Phytophthora_megasperma_VHS17183
            Phytophthora_pgchlamydo_DDS3753
            Phytophthora_pgchlamydo_SLPA121
            Phytophthora_pgchlamydo_VHS6595
            Phytophthora_taxon_PgChlamydo_x_Phytophthora_amnicola_MUCC777_A
            Phytophthora_taxon_PgChlamydo_x_Phytophthora_amnicola_MUCC777_PG
            Phytophthora_taxon_PgChlamydo_x_Phytophthora_amnicola_MUCC778_PG
            Phytophthora_taxon_PgChlamydo_x_Phytophthora_amnicola_MUCC779_PG
            Phytophthora_thermophila_VHS13530
            Phytophthora_thermophila_VHS7474
            Phytophthora_thermophila_X_Phytophthora__taxon_PgChlamydo_MUCC783_PG
            Phytophthora_thermophila_×_Phytophthora__taxon_PgChlamydo__MUCC783_T
            Phytophthora_thermophila_×_Phytophthora__taxon_PgChlamydo__MUCC784_PG
            Phytophthora_thermophila_×_Phytophthora__taxon_PgChlamydo_MUCC784_T
            Phytophthora_thermophila_×_Phytophthora_amnicola_CMW37731_T
            Phytophthora_thermophila_×_Phytophthora_amnicola_CMW37732_T
            Phytophthora_thermophila_×_Phytophthora_amnicola_CMW37733_T
            Phytophthora_thermophila_×_Phytophthora_amnicola_CMW37734_T
            Phytophthora_thermophila_×_Phytophthora_amnicola_MUCC780_T
            Phytophthora_thermophila_×_Phytophthora_amnicola_MUCC781_T
            Phytophthora_thermophila_×_Phytophthora_amnicola_MUCC782_T
            Phytophthora_thermophila_×_Phytophthora_amnicola_VHS22715_T
            Phytophthora_thermophila_×_Phytophthora_amnicola_VHS5185_T
            ;
END;

BEGIN TREES;
      TITLE GPA1_MP;
      LINK TAXA = Taxa;
      TREE GPA1_MP_3 = [&R] (((((((Phytophthora_taxon_PgChlamydo_x_Phytophthora_amnicola_MUCC777_A:3.0,(Phytophthora_fluvialis_CBS129424:0.0,Phytophthora_fluvialis_MUCC772:0.0):22.0):3.0,(((Phytophthora_thermophila_VHS7474:0.0,Phytophthora_thermophila_VHS13530:0.0,Phytophthora_thermophila_×_Phytophthora_amnicola_MUCC781_T:0.0,Phytophthora_thermophila_×_Phytophthora_amnicola_CMW37734_T:0.0):1.0,Phytophthora_thermophila_×_Phytophthora_amnicola_MUCC780_T:0.0,Phytophthora_thermophila_×_Phytophthora__taxon_PgChlamydo__MUCC783_T:0.0,Phytophthora_thermophila_×_Phytophthora__taxon_PgChlamydo_MUCC784_T:0.0,Phytophthora_thermophila_×_Phytophthora_amnicola_CMW37731_T:0.0,Phytophthora_thermophila_×_Phytophthora_amnicola_CMW37732_T:0.0,Phytophthora_thermophila_×_Phytophthora_amnicola_CMW37733_T:0.0):0.0,(Phytophthora_thermophila_×_Phytophthora_amnicola_MUCC782_T:0.0,Phytophthora_thermophila_×_Phytophthora_amnicola_VHS5185_T:0.0,Phytophthora_thermophila_×_Phytophthora_amnicola_VHS22715_T:0.0):2.0):7.0):2.0,(Phytophthora_litoralis_VHS20763:0.0,Phytophthora_litoralis_VHS17085:0.0):3.0):3.0,((Phytophthora_pgchlamydo_DDS3753:0.0,Phytophthora_pgchlamydo_VHS6595:0.0):3.0,Phytophthora_pgchlamydo_SLPA121:0.0,Phytophthora_amnicola_x_Phytophthora_taxon_PgChlamydo_MUCC774_PG:0.0,Phytophthora_taxon_PgChlamydo_x_Phytophthora_amnicola_MUCC777_PG:0.0,Phytophthora_taxon_PgChlamydo_x_Phytophthora_amnicola_MUCC778_PG:0.0,Phytophthora_taxon_PgChlamydo_x_Phytophthora_amnicola_MUCC779_PG:0.0,(Phytophthora_thermophila_X_Phytophthora__taxon_PgChlamydo_MUCC783_PG:0.0,Phytophthora_thermophila_×_Phytophthora__taxon_PgChlamydo__MUCC784_PG:0.0):2.0,Phytophthora_amnicola_x_Phytophthora_taxon_PgChlamydo_CMW37727_PG:0.0,Phytophthora_amnicola_x_Phytophthora_taxon_PgChlamydo_CMW37729_PG:0.0,Phytophthora_amnicola_x_Phytophthora_taxon_PgChlamydo_CMW37730_PG:0.0):3.0):3.0,(Phytophthora_gonapodyides_MUCC776:0.0,Phytophthora_gonapodyides_MUCC761:0.0):26.0):7.0,(Phytophthora_megasperma_VHS17183:0.0,Phytophthora_megasperma_DDS3432:0.0):10.0):13.0,Phytophthora_fragariae_PFF309_DQ092858:18.0);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr55220]


END;