#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on April 27, 2024; 13:52 GMT TreeBASE (cc) 1994-2008 Study reference: Korotkova N., Borsch T., Quandt D., Taylor N.P., Müller K.F., & Barthlott W. 2011. What does it take to resolve relationships and to identify species with molecular markers? An example from the epiphytic Rhipsalideae (Cactaceae). American Journal of Botany, 98(9): 1549–1572. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S11416] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=120; TAXLABELS Browningia_hertlingiana_CA001 Calymmanthium_substerile Echinopsis_aurea_CA104 Hatiora_cylindrica_CA119 Hatiora_epiphylloides_bradei_CA039 Hatiora_epiphylloides_subsp_epiphylloides_CA040 Hatiora_herminiae_CA042 Hatiora_salicornioides_CA009 Hatiora_salicornioides_CA043 Hatiora_salicornioides_CA048 Lepismium_cruciforme_CA010_BR Lepismium_cruciforme_CA068_BR Lepismium_cruciforme_CA069_BR Lepismium_houlletianum_CA082_BR Lepismium_houlletianum_CA083_BR Lepismium_houlletianum_houlletianum_CA130 Lepismium_houlletianum_regnellii_CA081_BR Lepismium_lorentzianum_CA080_AR Lepismium_lorentzianum_CA087_BO Lepismium_lorentzianum_CA088_BO Lepismium_lumbricoides_CA070_BR Lepismium_lumbricoides_CA071_BR Lepismium_lumbricoides_CA072_BO Lepismium_lumbricoides_f._aculeatum_CA129_BR Lepismium_lumbricoides_lumbricoides_CA128_BR Lepismium_warmingianum_CA074_BR Lepismium_warmingianum_CA075_BR Pfeiffera_monacantha_CA090 Rhipsalidopsis_gaertneri_CA041 Rhipsalidopsis_rosea_CA047 Rhipsalidopsis_xgraeseri_CA044 Rhipsalis_agudoensis_CA116 Rhipsalis_baccifera_CA099_CR Rhipsalis_baccifera_CA117_CO Rhipsalis_baccifera_CA138_CU Rhipsalis_baccifera_baccifera_CA013_VE Rhipsalis_baccifera_baccifera_CA135_CO Rhipsalis_baccifera_erythrocarpa_CA015_RW Rhipsalis_baccifera_hileiabaiana_CA152 Rhipsalis_baccifera_mauritiana_CA157 Rhipsalis_baccifera_subsp_horrida_CA014_MG Rhipsalis_baccifera_subsp._baccifera_CA002_BR Rhipsalis_burchellii_CA053 'Rhipsalis campos-portoana CA054' Rhipsalis_cereoides_CA020 Rhipsalis_cereuscula_CA050 Rhipsalis_clavata_f_clavata_CA049 Rhipsalis_clavata_f._delicatula_CA012 Rhipsalis_crispata_CA026 Rhipsalis_cuneata_CA021 Rhipsalis_dissimilis_dissimilis_CA064 Rhipsalis_dissimilis_epiphylanthoides_CA063 Rhipsalis_elliptica_CA022 Rhipsalis_elliptica_CA023 Rhipsalis_ewaldiana_CA107 Rhipsalis_floccosa_floccosa_CA139 Rhipsalis_floccosa_hohenauensis_CA154 Rhipsalis_floccosa_oreophila_CA132 Rhipsalis_floccosa_pulvinigera_CA056 Rhipsalis_floccosa_pulvinigera_CA057 Rhipsalis_floccosa_tucumanensis_CA058 Rhipsalis_goebeliana_CA030 Rhipsalis_grandiflora_CA004 Rhipsalis_grandiflora_CA105 Rhipsalis_grandiflora_CA106 Rhipsalis_hoelleri_CA108 Rhipsalis_juengeri_CA051 Rhipsalis_lindbergiana_CA103 Rhipsalis_mesembryanthemoides_CA101 Rhipsalis_micrantha_CA029_EC Rhipsalis_micrantha_CA032 Rhipsalis_micrantha_f_rauhiorum_CA121_EC Rhipsalis_micrantha_f._rauhiorum_CA018_CO Rhipsalis_micrantha_kirbergii_CA033_EC Rhipsalis_micrantha_micrantha_CA027 Rhipsalis_micrantha_micrantha_CA028_PE 'Rhipsalis neves-armondii CA110' 'Rhipsalis neves-armondii f. megalantha CA109' 'Rhipsalis neves-armondii neves-armondii CA006' Rhipsalis_oblonga_CA024 Rhipsalis_oblonga_CA031 Rhipsalis_occidentalis_CA025_PE Rhipsalis_occidentalis_CA096_EC Rhipsalis_olivifera_CA115 'Rhipsalis pacheco-leonis CA066' 'Rhipsalis pacheco-leonis CA113' 'Rhipsalis pacheco-leonis catenulata CA061' Rhipsalis_pachyptera_CA007 Rhipsalis_pachyptera_CA034 Rhipsalis_paradoxa_CA005 Rhipsalis_paradoxa_septentrionalis_CA059 Rhipsalis_pentaptera_CA065 Rhipsalis_pentaptera_CA067 Rhipsalis_pilocarpa_CA008 Rhipsalis_pilocarpa_CA055 Rhipsalis_pittieri_CA144_VE Rhipsalis_pittieri_CA156 Rhipsalis_pulchra_CA052 Rhipsalis_puniceodiscus_CA111 Rhipsalis_puniceodiscus_CA112 Rhipsalis_russellii_CA019 Rhipsalis_shaferi_CA003 Rhipsalis_shaferi_CA136 Rhipsalis_sulcata_CA062 Rhipsalis_teres_CA102 Rhipsalis_teres_CA134 Rhipsalis_teres_f._capilliformis_CA097 Rhipsalis_teres_f._heteroclada_CA011 Rhipsalis_teres_f._heteroclada_CA100 Rhipsalis_teres_f._prismatica_CA118 Rhipsalis_trigona_CA060 Schlumbergera_kautskyi_CA037 Schlumbergera_microsphaerica_CA122 Schlumbergera_opuntioides_CA038 Schlumbergera_orssichiana_CA035 Schlumbergera_orssichiana_CA046 Schlumbergera_russelliana_CA036 Schlumbergera_russelliana_CA045 Schlumbergera_truncata_CA016 Schlumbergera_truncata_CA127 ; END; BEGIN TREES; TITLE Bayesian_including_indels_PP; LINK TAXA = Taxa; TREE 'tree1+' = [&R] (((((((((((((((Rhipsalis_elliptica_CA022:0.020265,Rhipsalis_elliptica_CA023:0.010033)1.0:0.047938,Rhipsalis_micrantha_micrantha_CA027:0.010712,Rhipsalis_micrantha_micrantha_CA028_PE:0.010501,Rhipsalis_micrantha_CA029_EC:0.032354,Rhipsalis_micrantha_CA032:0.010621,Rhipsalis_micrantha_kirbergii_CA033_EC:0.010708,Rhipsalis_micrantha_f._rauhiorum_CA018_CO:0.010698,Rhipsalis_micrantha_f_rauhiorum_CA121_EC:0.021381)1.0:0.076176,(Rhipsalis_goebeliana_CA030:0.021677,Rhipsalis_ewaldiana_CA107:0.043208)1.0:0.066165):0.022051,(((Rhipsalis_crispata_CA026:0.077385,Rhipsalis_oblonga_CA031:0.101362)0.55:0.025061,Rhipsalis_oblonga_CA024:0.029524)1.0:0.059883,(Rhipsalis_cuneata_CA021:0.021391,Rhipsalis_occidentalis_CA025_PE:0.010504,Rhipsalis_occidentalis_CA096_EC:0.010732)1.0:0.112856)1.0:0.064681,Rhipsalis_olivifera_CA115:0.155051)0.93:0.040852,((((Rhipsalis_grandiflora_CA004:0.041169,Rhipsalis_grandiflora_CA106:0.019859)0.98:0.020448,Rhipsalis_grandiflora_CA105:0.010267)1.0:0.076237,(Rhipsalis_pittieri_CA144_VE:0.041677,Rhipsalis_pittieri_CA156:0.020982)1.0:0.143897)0.56:0.022764,(((Rhipsalis_russellii_CA019:0.020708,Rhipsalis_agudoensis_CA116:0.020204)1.0:0.030687,Rhipsalis_cereoides_CA020:0.020219)0.98:0.020699,(Rhipsalis_pachyptera_CA007:0.020603,Rhipsalis_pachyptera_CA034:0.02032)0.99:0.020553)1.0:0.066588)1.0:0.054369)0.98:0.043237,(((((((Rhipsalis_baccifera_subsp_horrida_CA014_MG:0.021604,Rhipsalis_baccifera_erythrocarpa_CA015_RW:0.010427)1.0:0.03702,Rhipsalis_baccifera_mauritiana_CA157:0.013545)0.69:0.023077,(Rhipsalis_baccifera_subsp._baccifera_CA002_BR:0.043253,Rhipsalis_baccifera_CA117_CO:0.021625)0.82:0.02042,Rhipsalis_baccifera_baccifera_CA013_VE:0.048766,Rhipsalis_baccifera_baccifera_CA135_CO:0.061946,Rhipsalis_baccifera_CA138_CU:0.010314):0.037808,(((Rhipsalis_sulcata_CA062:0.010701,Rhipsalis_teres_f._heteroclada_CA011:0.042926,Rhipsalis_teres_f._heteroclada_CA100:0.010619,Rhipsalis_teres_CA102:0.14103,Rhipsalis_teres_f._prismatica_CA118:0.043001,Rhipsalis_teres_CA134:0.021097)0.99:0.021514,Rhipsalis_teres_f._capilliformis_CA097:0.021548)1.0:0.04169,Rhipsalis_baccifera_CA099_CR:0.054676)0.95:0.029166)1.0:0.153631,Rhipsalis_baccifera_hileiabaiana_CA152:0.095067):0.027485,Rhipsalis_mesembryanthemoides_CA101:0.155987)1.0:0.095538,(Rhipsalis_shaferi_CA003:0.103331,Rhipsalis_shaferi_CA136:0.03068)1.0:0.089988):0.032443)0.74:0.022771,((Rhipsalis_lindbergiana_CA103:0.020835,(Rhipsalis_pentaptera_CA065:0.032191,Rhipsalis_pentaptera_CA067:0.040077):0.025237,'Rhipsalis pacheco-leonis catenulata CA061':0.010396,'Rhipsalis pacheco-leonis CA066':0.031086)1.0:0.059891,'Rhipsalis pacheco-leonis CA113':0.026199)1.0:0.240112)1.0:0.11062,(Rhipsalis_paradoxa_CA005:0.009626,Rhipsalis_paradoxa_septentrionalis_CA059:0.020038)1.0:0.310515)0.99:0.044647,((((((Rhipsalis_pilocarpa_CA008:0.020648,Rhipsalis_pilocarpa_CA055:0.010469)1.0:0.145811,'Rhipsalis campos-portoana CA054':0.056083)1.0:0.12234,(Rhipsalis_pulchra_CA052:0.064335,Rhipsalis_burchellii_CA053:0.112292)1.0:0.123036)0.92:0.027858,Rhipsalis_cereuscula_CA050:0.175262)1.0:0.045576,Rhipsalis_juengeri_CA051:0.117931)0.85:0.021141,(Rhipsalis_clavata_f._delicatula_CA012:0.071441,Rhipsalis_clavata_f_clavata_CA049:0.049433)1.0:0.316067)1.0:0.143809)1.0:0.102284,((((Rhipsalis_trigona_CA060:0.050689,Rhipsalis_floccosa_pulvinigera_CA056:0.020286,Rhipsalis_dissimilis_dissimilis_CA064:0.040869,Rhipsalis_floccosa_floccosa_CA139:0.040983,Rhipsalis_floccosa_hohenauensis_CA154:0.311178):0.020834,Rhipsalis_floccosa_pulvinigera_CA057:0.072959)1.0:0.064559,(Rhipsalis_floccosa_tucumanensis_CA058:0.019874,Rhipsalis_dissimilis_epiphylanthoides_CA063:0.030197,Rhipsalis_floccosa_oreophila_CA132:0.029895)1.0:0.082584)1.0:0.093376,(((Rhipsalis_puniceodiscus_CA111:0.040589,Rhipsalis_puniceodiscus_CA112:0.020179)1.0:0.095738,Rhipsalis_hoelleri_CA108:0.101762)0.88:0.030492,('Rhipsalis neves-armondii neves-armondii CA006':0.01994,'Rhipsalis neves-armondii f. megalantha CA109':0.020313,'Rhipsalis neves-armondii CA110':0.010404)1.0:0.09758)1.0:0.113379)0.99:0.077516)1.0:0.350527,((((((Lepismium_houlletianum_CA082_BR:0.010483,Lepismium_houlletianum_houlletianum_CA130:0.01051)0.99:0.02397,Lepismium_houlletianum_CA083_BR:0.042587)1.0:0.060748,Lepismium_houlletianum_regnellii_CA081_BR:0.030715)1.0:0.320568,((Lepismium_cruciforme_CA068_BR:0.030323,Lepismium_cruciforme_CA069_BR:0.035742)0.95:0.028393,Lepismium_cruciforme_CA010_BR:0.081948)1.0:0.414417)0.95:0.079817,((Lepismium_lorentzianum_CA080_AR:0.008755,Lepismium_lorentzianum_CA087_BO:0.008727,Lepismium_lorentzianum_CA088_BO:0.008779)1.0:0.180586,(Lepismium_warmingianum_CA074_BR:0.02483,Lepismium_warmingianum_CA075_BR:0.025529)1.0:0.149259)1.0:0.269468)0.98:0.073486,((Lepismium_lumbricoides_lumbricoides_CA128_BR:0.041887,Lepismium_lumbricoides_f._aculeatum_CA129_BR:0.010242)1.0:0.040941,Lepismium_lumbricoides_CA070_BR:0.050911,Lepismium_lumbricoides_CA071_BR:0.020314,Lepismium_lumbricoides_CA072_BO:0.018089)1.0:0.53645)1.0:0.329459)0.65:0.045552,((Rhipsalidopsis_xgraeseri_CA044:0.294338,Rhipsalidopsis_rosea_CA047:0.098164)1.0:0.168387,Rhipsalidopsis_gaertneri_CA041:0.58905)1.0:0.345553)0.84:0.037418,(((Hatiora_cylindrica_CA119:0.083336,Hatiora_salicornioides_CA009:0.096601,Hatiora_salicornioides_CA043:0.112669)1.0:0.140534,Hatiora_salicornioides_CA048:0.331953)1.0:0.220315,Hatiora_herminiae_CA042:0.292596)1.0:0.352397)0.86:0.042646,((((((Schlumbergera_truncata_CA127:0.306875,Schlumbergera_truncata_CA016:0.254205,Schlumbergera_orssichiana_CA035:0.019783,Schlumbergera_orssichiana_CA046:0.019364)1.0:0.14236,Schlumbergera_kautskyi_CA037:0.20438)1.0:0.141884,Schlumbergera_russelliana_CA036:0.012066):0.095347,Schlumbergera_russelliana_CA045:0.070524)1.0:0.319519,(Hatiora_epiphylloides_bradei_CA039:0.019878,Hatiora_epiphylloides_subsp_epiphylloides_CA040:0.059712)1.0:0.426497)1.0:0.075716,(Schlumbergera_opuntioides_CA038:0.210005,Schlumbergera_microsphaerica_CA122:0.22793)1.0:0.251753)1.0:0.149744)1.0:0.411666,Browningia_hertlingiana_CA001:0.71332,Echinopsis_aurea_CA104:0.849242,Pfeiffera_monacantha_CA090:0.690085,Calymmanthium_substerile:0.840481); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr55825] END;